Definition Novosphingobium aromaticivorans DSM 12444 chromosome, complete genome.
Accession NC_007794
Length 3,561,584

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The map label for this gene is 87200832

Identifier: 87200832

GI number: 87200832

Start: 3042799

End: 3043689

Strand: Direct

Name: 87200832

Synonym: Saro_2819

Alternate gene names: NA

Gene position: 3042799-3043689 (Clockwise)

Preceding gene: 87200831

Following gene: 87200833

Centisome position: 85.43

GC content: 67.12

Gene sequence:

>891_bases
ATGACCGACCAGAACCGCATCGTAAGCTGGCACGCCAATCCGTCGAAGCCGCGCTACACCCCGCCGCCGGGCGCGGTCGA
CGCGCATTGCCACGTCTTCGGCCCGATGGCGCAGTTCCCCTTCTCGGCCAAGGCCAAGTACCTGCCCGAGGACGCCGGCC
CCGACATGCTCTTCGCCCTGCGCGACCACCTCGGCTTCGAGCGCAACGTGATCGTCCAGGCAAGCTGCCACGGCACCGAC
AACGCCGCCACGCTTGATGCCATCGCCAGGTCGAACGGAAAGGCGCGCGGCGTCGCCGTCGTCGATCCCGCCATCTCGGA
GACGGACCTCCAGGCTCTCCACGAAGGCGGCATCCGCGGCATCCGCTTCAACTTCCTCAAGCGCCTCGTCGACGATGCGC
CCAAGGACAAGTTCCTCGAAGTCGCCCGGCGCCTGCCCAAGGGTTGGCACGTCGTGATCTATTTCGAGGCCGACATCCTC
GAGGAACTGCGTCCGTTCATGGATGCGATCCCCGTGCCGCTGGTCATCGACCACATGGGCCGCCCCGATGTCCGCCAGGG
CCCCGACGGCGCCGACATGAAGGCCTTCCGCAACTTCCTGAACAGCCGCGACGACATCTGGTTCAAGGCCACCTGCCCCG
ACCGGCTCGACGCGATCAAGGAAGGCGGCGCGGGCGATCCGTGGAACGCCTTTGCCGATGCCGTCGCGCCGCTCGTTGCC
GACTACCAGGACCGGGTCCTGTGGGGGACCGACTGGCCGCACCCCAACATGGACACCGAGATCCCCGACGACGGCCATCT
CGTCGACATGATCCCCCGCATCGCCCCGACCGAGGAACTGCAACGCAAGCTCCTCGTCGACAATCCGATGCGGCTCTACT
GGGCCGACTGA

Upstream 100 bases:

>100_bases
GGGAAATGAGCTGCGTCCTCGAGACGGACGACAAGGGCGAAGTCCGCACCGCCGCCCTGCTGCGCACCGCGCGCAAGCTG
ATGGATGGAGTAGTATTCGC

Downstream 100 bases:

>100_bases
TCCGTGGTATGGATTGGCGCATGACATTGCGCCAATCCGCCACCGAACTCCTGATCCCCACCCCCGGCCGGGGCCTGCAC
GAAATCACCCGCGAGGTGAC

Product: amidohydrolase 2

Products: NA

Alternate protein names: 2-Pyrone-4 6-Dicarboxylic Acid Hydrolase; Amidohydrolase; Dicarboxylic Acid Hydrolase; Metal-Dependent Hydrolase; 2-Pyrone-4 6-Dicarbaxylate Hydrolase; 2-Pyrone-4 6-Dicarboxylate Hydrolase; Amidohydrolase Family Protein; 2-Pyrone-4 6-Dicarboxylate Lactonase; Hydrolase Amidohydrolase 2 Motif; Metal-Dependent Hydrolase Of TIM-Barrel Fold; Transcriptional Regulator GntR; Aminohydrolase; Metal-Dependent Transmembrane Hydrolase; Metal-Dependent Hydrolase Protein; Metal-Dependent Hydrolase Of TIM-Barrel Fold Family; Amidohydrolase 2 Family; Amidohydrolase Family; Exported Protein

Number of amino acids: Translated: 296; Mature: 295

Protein sequence:

>296_residues
MTDQNRIVSWHANPSKPRYTPPPGAVDAHCHVFGPMAQFPFSAKAKYLPEDAGPDMLFALRDHLGFERNVIVQASCHGTD
NAATLDAIARSNGKARGVAVVDPAISETDLQALHEGGIRGIRFNFLKRLVDDAPKDKFLEVARRLPKGWHVVIYFEADIL
EELRPFMDAIPVPLVIDHMGRPDVRQGPDGADMKAFRNFLNSRDDIWFKATCPDRLDAIKEGGAGDPWNAFADAVAPLVA
DYQDRVLWGTDWPHPNMDTEIPDDGHLVDMIPRIAPTEELQRKLLVDNPMRLYWAD

Sequences:

>Translated_296_residues
MTDQNRIVSWHANPSKPRYTPPPGAVDAHCHVFGPMAQFPFSAKAKYLPEDAGPDMLFALRDHLGFERNVIVQASCHGTD
NAATLDAIARSNGKARGVAVVDPAISETDLQALHEGGIRGIRFNFLKRLVDDAPKDKFLEVARRLPKGWHVVIYFEADIL
EELRPFMDAIPVPLVIDHMGRPDVRQGPDGADMKAFRNFLNSRDDIWFKATCPDRLDAIKEGGAGDPWNAFADAVAPLVA
DYQDRVLWGTDWPHPNMDTEIPDDGHLVDMIPRIAPTEELQRKLLVDNPMRLYWAD
>Mature_295_residues
TDQNRIVSWHANPSKPRYTPPPGAVDAHCHVFGPMAQFPFSAKAKYLPEDAGPDMLFALRDHLGFERNVIVQASCHGTDN
AATLDAIARSNGKARGVAVVDPAISETDLQALHEGGIRGIRFNFLKRLVDDAPKDKFLEVARRLPKGWHVVIYFEADILE
ELRPFMDAIPVPLVIDHMGRPDVRQGPDGADMKAFRNFLNSRDDIWFKATCPDRLDAIKEGGAGDPWNAFADAVAPLVAD
YQDRVLWGTDWPHPNMDTEIPDDGHLVDMIPRIAPTEELQRKLLVDNPMRLYWAD

Specific function: Unknown

COG id: COG3618

COG function: function code R; Predicted metal-dependent hydrolase of the TIM-barrel fold

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 33134; Mature: 33003

Theoretical pI: Translated: 5.20; Mature: 5.20

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTDQNRIVSWHANPSKPRYTPPPGAVDAHCHVFGPMAQFPFSAKAKYLPEDAGPDMLFAL
CCCCCCEEEECCCCCCCCCCCCCCCCCCCEEEECCHHHCCCCCCCCCCCCCCCCHHHHHH
RDHLGFERNVIVQASCHGTDNAATLDAIARSNGKARGVAVVDPAISETDLQALHEGGIRG
HHHCCCCCCEEEEEECCCCCCHHHHHHHHHCCCCCCCEEEECCCCCHHHHHHHHHCCCCC
IRFNFLKRLVDDAPKDKFLEVARRLPKGWHVVIYFEADILEELRPFMDAIPVPLVIDHMG
HHHHHHHHHHHCCCHHHHHHHHHHCCCCCEEEEEECHHHHHHHHHHHHHCCCCCEECCCC
RPDVRQGPDGADMKAFRNFLNSRDDIWFKATCPDRLDAIKEGGAGDPWNAFADAVAPLVA
CCCCCCCCCCCCHHHHHHHHCCCCCEEEEECCCHHHHHHHCCCCCCCHHHHHHHHHHHHH
DYQDRVLWGTDWPHPNMDTEIPDDGHLVDMIPRIAPTEELQRKLLVDNPMRLYWAD
HHCCCEEECCCCCCCCCCCCCCCCCCHHHHHCCCCCHHHHHHHHHCCCCCEEEECC
>Mature Secondary Structure 
TDQNRIVSWHANPSKPRYTPPPGAVDAHCHVFGPMAQFPFSAKAKYLPEDAGPDMLFAL
CCCCCEEEECCCCCCCCCCCCCCCCCCCEEEECCHHHCCCCCCCCCCCCCCCCHHHHHH
RDHLGFERNVIVQASCHGTDNAATLDAIARSNGKARGVAVVDPAISETDLQALHEGGIRG
HHHCCCCCCEEEEEECCCCCCHHHHHHHHHCCCCCCCEEEECCCCCHHHHHHHHHCCCCC
IRFNFLKRLVDDAPKDKFLEVARRLPKGWHVVIYFEADILEELRPFMDAIPVPLVIDHMG
HHHHHHHHHHHCCCHHHHHHHHHHCCCCCEEEEEECHHHHHHHHHHHHHCCCCCEECCCC
RPDVRQGPDGADMKAFRNFLNSRDDIWFKATCPDRLDAIKEGGAGDPWNAFADAVAPLVA
CCCCCCCCCCCCHHHHHHHHCCCCCEEEEECCCHHHHHHHCCCCCCCHHHHHHHHHHHHH
DYQDRVLWGTDWPHPNMDTEIPDDGHLVDMIPRIAPTEELQRKLLVDNPMRLYWAD
HHCCCEEECCCCCCCCCCCCCCCCCCHHHHHCCCCCHHHHHHHHHCCCCCEEEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA