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The map label for this gene is agmR [H]

Identifier: 87200639

GI number: 87200639

Start: 2842798

End: 2843421

Strand: Direct

Name: agmR [H]

Synonym: Saro_2626

Alternate gene names: 87200639

Gene position: 2842798-2843421 (Clockwise)

Preceding gene: 87200638

Following gene: 87200641

Centisome position: 79.82

GC content: 65.38

Gene sequence:

>624_bases
GTGAGCGGAACAATCCTGATTGCCGACGACCATCCGCTGTTCCGCCAGGCCCTCGCCCTGGCGGTTTCAGCGGTGGCCCC
GTCAGCGCGAATCGTCGAAGCAGGGACTCTGGCGAATGCGGCAAAGGCCGCGGCGGAGGCCACTGACCTCAGGTTGATCA
CGCTCGACCTCAAGATGCCGGGTGCCATCGGCTACTCCGGCATCGCCCTGCTCCACGCCGAAAAGCCTGACGTCCCCATA
CTCGTGGTCTCAAGCGCTGAAGGTGCGCAGGTGGCTGAAGAAGCACGCGCCTTCGGCGCCGTAGGTTTCCTACGCAAGGA
CGCGGACCTCACCCGCATCGAGGACGCCATTTGTGCCGCGCTGGATGGCGGCGCTGCACCTGCAGCAGCAGCCGAACCGA
TCGAGCAGGTGCGGCGCGAAGTGGCCGGGCTGACGCCTACGCAACTCAAGGTCCTACTGGCTGTCCTCGAGGGCAAGCTG
AACAAGCAGATCGCCTATGACCTGGGGATGAGCGAGGCGACGGTGAAGGCGCACATGACCGCGATCATGCGCAAGCTCGA
TGTCCAGAACCGCACCCAGGCAGCGCTCGTCGCCCGGTCCCTAGGGCTCGATCTCGCCTCCTGA

Upstream 100 bases:

>100_bases
TGGCGACACGTCGACCCTTGCCGATCCGTCGGTTGTCGATAATCTGCTGGCCAACAGACCGCAGCTCGCAGGGGCTTGAA
CGCGGACTGTCCGGAGGGGC

Downstream 100 bases:

>100_bases
CACGCCAGCCAGAAAGGCCTCGATCGCAGCCGGATCTGCCGGTTTCACGAACAGGGGCACGCGCCGCATTCGCAACCGAT
TGCGCAAGTCCGCGCCGCTC

Product: two component LuxR family transcriptional regulator

Products: NA

Alternate protein names: Protein AgmR [H]

Number of amino acids: Translated: 207; Mature: 206

Protein sequence:

>207_residues
MSGTILIADDHPLFRQALALAVSAVAPSARIVEAGTLANAAKAAAEATDLRLITLDLKMPGAIGYSGIALLHAEKPDVPI
LVVSSAEGAQVAEEARAFGAVGFLRKDADLTRIEDAICAALDGGAAPAAAAEPIEQVRREVAGLTPTQLKVLLAVLEGKL
NKQIAYDLGMSEATVKAHMTAIMRKLDVQNRTQAALVARSLGLDLAS

Sequences:

>Translated_207_residues
MSGTILIADDHPLFRQALALAVSAVAPSARIVEAGTLANAAKAAAEATDLRLITLDLKMPGAIGYSGIALLHAEKPDVPI
LVVSSAEGAQVAEEARAFGAVGFLRKDADLTRIEDAICAALDGGAAPAAAAEPIEQVRREVAGLTPTQLKVLLAVLEGKL
NKQIAYDLGMSEATVKAHMTAIMRKLDVQNRTQAALVARSLGLDLAS
>Mature_206_residues
SGTILIADDHPLFRQALALAVSAVAPSARIVEAGTLANAAKAAAEATDLRLITLDLKMPGAIGYSGIALLHAEKPDVPIL
VVSSAEGAQVAEEARAFGAVGFLRKDADLTRIEDAICAALDGGAAPAAAAEPIEQVRREVAGLTPTQLKVLLAVLEGKLN
KQIAYDLGMSEATVKAHMTAIMRKLDVQNRTQAALVARSLGLDLAS

Specific function: Positive activator for glycerol metabolism [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 response regulatory domain [H]

Homologues:

Organism=Escherichia coli, GI1788521, Length=203, Percent_Identity=31.0344827586207, Blast_Score=77, Evalue=8e-16,
Organism=Escherichia coli, GI1789937, Length=194, Percent_Identity=23.7113402061856, Blast_Score=62, Evalue=3e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011006
- InterPro:   IPR016032
- InterPro:   IPR001789
- InterPro:   IPR000792
- InterPro:   IPR011991 [H]

Pfam domain/function: PF00196 GerE; PF00072 Response_reg [H]

EC number: NA

Molecular weight: Translated: 21396; Mature: 21265

Theoretical pI: Translated: 5.30; Mature: 5.30

Prosite motif: PS50110 RESPONSE_REGULATORY ; PS00622 HTH_LUXR_1 ; PS50043 HTH_LUXR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSGTILIADDHPLFRQALALAVSAVAPSARIVEAGTLANAAKAAAEATDLRLITLDLKMP
CCCEEEEECCCHHHHHHHHHHHHHCCCCCCEEECCHHHHHHHHHHHHCCEEEEEEEEECC
GAIGYSGIALLHAEKPDVPILVVSSAEGAQVAEEARAFGAVGFLRKDADLTRIEDAICAA
CCCCCCCEEEEECCCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHH
LDGGAAPAAAAEPIEQVRREVAGLTPTQLKVLLAVLEGKLNKQIAYDLGMSEATVKAHMT
HCCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCHHHHHHCCCCHHHHHHHHH
AIMRKLDVQNRTQAALVARSLGLDLAS
HHHHHHCCCCHHHHHHHHHHHCCCCCC
>Mature Secondary Structure 
SGTILIADDHPLFRQALALAVSAVAPSARIVEAGTLANAAKAAAEATDLRLITLDLKMP
CCEEEEECCCHHHHHHHHHHHHHCCCCCCEEECCHHHHHHHHHHHHCCEEEEEEEEECC
GAIGYSGIALLHAEKPDVPILVVSSAEGAQVAEEARAFGAVGFLRKDADLTRIEDAICAA
CCCCCCCEEEEECCCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHH
LDGGAAPAAAAEPIEQVRREVAGLTPTQLKVLLAVLEGKLNKQIAYDLGMSEATVKAHMT
HCCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCHHHHHHCCCCHHHHHHHHH
AIMRKLDVQNRTQAALVARSLGLDLAS
HHHHHHCCCCHHHHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 1938886; 10984043 [H]