| Definition | Novosphingobium aromaticivorans DSM 12444 chromosome, complete genome. |
|---|---|
| Accession | NC_007794 |
| Length | 3,561,584 |
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The map label for this gene is acsA
Identifier: 87200638
GI number: 87200638
Start: 2840827
End: 2842776
Strand: Direct
Name: acsA
Synonym: Saro_2625
Alternate gene names: 87200638
Gene position: 2840827-2842776 (Clockwise)
Preceding gene: 87200627
Following gene: 87200639
Centisome position: 79.76
GC content: 64.77
Gene sequence:
>1950_bases ATGGGCGAGGCAGTCTATCCTGTACCGGCTGAGTGGGCGCAGAACGCGCTGGTCGACGAGGCGCGCTACCAGGATATGTA TCGCCAGTCGGTCGACGATCCCGAAGGCTTCTGGGCCGAACACGGCAAGCGGATCGATTGGATCAGGCCTTTCACCAAGG TCAAGAACACCTCGTTTCACGAAGCCGACTTCGGCATCCGCTGGTTCGAGGACGGCACGCTCAACCTCGCCGCGAACTGC CTCGACCGTCACCTCGCCGAACGCGGCGACGAGATCGCGATCCTGTGGGAGCCCGACAGCCCCGACGAGGCACACCGCGA GATCACCTACCGCCAGCTCCACGCCGATGTCTGCCGCTTTGCCAACCTGCTGAAGGCCAAGGGCGTCCAGAAGGGCGAGC GCGTCACCATCTACCTGCCGATGGTGCCGGAAGCCGCCGTGGCGATGCTGGCCTGCGCCCGCATCGGCGCGATCCATTCC ATCGTCTTTGCAGGCTTCAGCCCGGATGCGCTGGCCGGCCGCATCACCGACTGCGACAGCCGCATCGTCCTCACCTCGGA CGAAGGCCTGCGCGGCGGACGCAAGGTTCCGCTGAAGGCCAATGTGGACGAGGCGCTGAAGCAATGCCCCGGCGTCGACA CCGTGATCATGCTGCGCCGCACGGGCGCCGACGTGGACTTTGTCGAAGGCCGCGACATCGACTGGGCAACGGCAGTCGCC GAGCAGAGCGCCGATTGCCAGCCCGAGGAAATGAACGCGGAAGACCCGCTGTTCATCCTCTACACCTCCGGCTCTACCGG AAAGCCCAAGGGCGTGCTGCACACGACGGGCGGCTATTCGGTCTGGGCGTCGATGACGCACCAGTACGTGTTCGATTACC GTCCCGGGCAGATCTACTGGTGCGCGGCCGACATCGGCTGGGTCACCGGCCACTCCTATGTCGTCTACGGACCGCTCATG AACGGCGCCACTACGGTCATGTTTGAAGGCGTGCCGAACTTCCCGGACGCAAGCCGCTTCTGGCAGGTGGTCGACAAGTT CAAGGTCGAAATCTTCTACGGCGCCCCTACCGCGCTGCGCGCCCTGATGCGCGAGGGCGACGAATGGGTGAAGAAGACGA GCCGCGCCTCGCTGCGCCTGCTTGGTTCGGTGGGCGAACCGATCAATCCCGAAGCCTGGGAATGGTATCACAAGGTCGTA GGCGACAGTCGCTGCCCGATCGTCGACACCTGGTGGCAGACCGAAACCGGCGGGGCGATGATCACCCCGCTACCGGGCGC GACCGCGCTCAAGCCCGGCTCGGCCTCGCGCCCGTTCTTCGGCGTAAAGCCCGCGCTTGTCGATAACGACGGCACGTTCC TTGAAGGCGCGACTGACGGGTGCCTCGTAGTGACCGATAGCTGGCCCGGCCAGATGCGCACCGTGTGGGGCGATCACGAG CGGTTCTTCCAGACCTATTTCACCACTTTCAAGGGCCTGTACTTCACCGGCGACGGATGCCGCCGCGACGAGGACGGCTA CTACTGGATCACCGGCCGCATCGACGACGTGATCAACGTGTCGGGCCACCGCATGGGAACGGCGGAAATCGAAAGCGCGC TGGTCGCCCACCCGAAGGTGGCCGAAGCTGCGGTCGTCGGCATGCCGCACGACATCAAGGGCCAGGGCATCTACGCCTTC GTCACCTGCAATGCCGAAATCGAGCCCGACGACCTGCTGCGCAAGGAGTTGATCCAGTGGGTCCGCCACGAAATCGGCCC CATCGCCACGCCGGACGTGATCCAGTTCGCTCCCGGTCTGCCCAAAACCCGTTCGGGCAAGATCATGCGCCGCATCCTGC GCAAGATCGGCGAGAACGACGTCTCCAACCTTGGCGACACGTCGACCCTTGCCGATCCGTCGGTTGTCGATAATCTGCTG GCCAACAGACCGCAGCTCGCAGGGGCTTGA
Upstream 100 bases:
>100_bases GAGGATGGTCTTATATCTACGACTATTGTCTAGAAGCCCCGCATGGCCGGGGTGCGGTAACACGCCCGGCAAGAGCAGAA TCTGAAAAGGAGAGCCTGAA
Downstream 100 bases:
>100_bases ACGCGGACTGTCCGGAGGGGCGTGAGCGGAACAATCCTGATTGCCGACGACCATCCGCTGTTCCGCCAGGCCCTCGCCCT GGCGGTTTCAGCGGTGGCCC
Product: acetyl-coenzyme A synthetase
Products: NA
Alternate protein names: Acetate--CoA ligase; Acyl-activating enzyme
Number of amino acids: Translated: 649; Mature: 648
Protein sequence:
>649_residues MGEAVYPVPAEWAQNALVDEARYQDMYRQSVDDPEGFWAEHGKRIDWIRPFTKVKNTSFHEADFGIRWFEDGTLNLAANC LDRHLAERGDEIAILWEPDSPDEAHREITYRQLHADVCRFANLLKAKGVQKGERVTIYLPMVPEAAVAMLACARIGAIHS IVFAGFSPDALAGRITDCDSRIVLTSDEGLRGGRKVPLKANVDEALKQCPGVDTVIMLRRTGADVDFVEGRDIDWATAVA EQSADCQPEEMNAEDPLFILYTSGSTGKPKGVLHTTGGYSVWASMTHQYVFDYRPGQIYWCAADIGWVTGHSYVVYGPLM NGATTVMFEGVPNFPDASRFWQVVDKFKVEIFYGAPTALRALMREGDEWVKKTSRASLRLLGSVGEPINPEAWEWYHKVV GDSRCPIVDTWWQTETGGAMITPLPGATALKPGSASRPFFGVKPALVDNDGTFLEGATDGCLVVTDSWPGQMRTVWGDHE RFFQTYFTTFKGLYFTGDGCRRDEDGYYWITGRIDDVINVSGHRMGTAEIESALVAHPKVAEAAVVGMPHDIKGQGIYAF VTCNAEIEPDDLLRKELIQWVRHEIGPIATPDVIQFAPGLPKTRSGKIMRRILRKIGENDVSNLGDTSTLADPSVVDNLL ANRPQLAGA
Sequences:
>Translated_649_residues MGEAVYPVPAEWAQNALVDEARYQDMYRQSVDDPEGFWAEHGKRIDWIRPFTKVKNTSFHEADFGIRWFEDGTLNLAANC LDRHLAERGDEIAILWEPDSPDEAHREITYRQLHADVCRFANLLKAKGVQKGERVTIYLPMVPEAAVAMLACARIGAIHS IVFAGFSPDALAGRITDCDSRIVLTSDEGLRGGRKVPLKANVDEALKQCPGVDTVIMLRRTGADVDFVEGRDIDWATAVA EQSADCQPEEMNAEDPLFILYTSGSTGKPKGVLHTTGGYSVWASMTHQYVFDYRPGQIYWCAADIGWVTGHSYVVYGPLM NGATTVMFEGVPNFPDASRFWQVVDKFKVEIFYGAPTALRALMREGDEWVKKTSRASLRLLGSVGEPINPEAWEWYHKVV GDSRCPIVDTWWQTETGGAMITPLPGATALKPGSASRPFFGVKPALVDNDGTFLEGATDGCLVVTDSWPGQMRTVWGDHE RFFQTYFTTFKGLYFTGDGCRRDEDGYYWITGRIDDVINVSGHRMGTAEIESALVAHPKVAEAAVVGMPHDIKGQGIYAF VTCNAEIEPDDLLRKELIQWVRHEIGPIATPDVIQFAPGLPKTRSGKIMRRILRKIGENDVSNLGDTSTLADPSVVDNLL ANRPQLAGA >Mature_648_residues GEAVYPVPAEWAQNALVDEARYQDMYRQSVDDPEGFWAEHGKRIDWIRPFTKVKNTSFHEADFGIRWFEDGTLNLAANCL DRHLAERGDEIAILWEPDSPDEAHREITYRQLHADVCRFANLLKAKGVQKGERVTIYLPMVPEAAVAMLACARIGAIHSI VFAGFSPDALAGRITDCDSRIVLTSDEGLRGGRKVPLKANVDEALKQCPGVDTVIMLRRTGADVDFVEGRDIDWATAVAE QSADCQPEEMNAEDPLFILYTSGSTGKPKGVLHTTGGYSVWASMTHQYVFDYRPGQIYWCAADIGWVTGHSYVVYGPLMN GATTVMFEGVPNFPDASRFWQVVDKFKVEIFYGAPTALRALMREGDEWVKKTSRASLRLLGSVGEPINPEAWEWYHKVVG DSRCPIVDTWWQTETGGAMITPLPGATALKPGSASRPFFGVKPALVDNDGTFLEGATDGCLVVTDSWPGQMRTVWGDHER FFQTYFTTFKGLYFTGDGCRRDEDGYYWITGRIDDVINVSGHRMGTAEIESALVAHPKVAEAAVVGMPHDIKGQGIYAFV TCNAEIEPDDLLRKELIQWVRHEIGPIATPDVIQFAPGLPKTRSGKIMRRILRKIGENDVSNLGDTSTLADPSVVDNLLA NRPQLAGA
Specific function: Enables The Cell To Use Acetate During Aerobic Growth To Generate Energy Via The Tca Cycle, And Biosynthetic Compounds Via The Glyoxylate Shunt. Acetylates Chey, The Response Regulator Involved In Flagellar Movement And Chemotaxis. [C]
COG id: COG0365
COG function: function code I; Acyl-coenzyme A synthetases/AMP-(fatty) acid ligases
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the ATP-dependent AMP-binding enzyme family
Homologues:
Organism=Homo sapiens, GI8923896, Length=668, Percent_Identity=53.5928143712575, Blast_Score=702, Evalue=0.0, Organism=Homo sapiens, GI253970489, Length=681, Percent_Identity=52.5697503671072, Blast_Score=697, Evalue=0.0, Organism=Homo sapiens, GI28416953, Length=624, Percent_Identity=51.7628205128205, Blast_Score=668, Evalue=0.0, Organism=Homo sapiens, GI13375727, Length=634, Percent_Identity=38.01261829653, Blast_Score=415, Evalue=1e-116, Organism=Homo sapiens, GI42544132, Length=514, Percent_Identity=29.9610894941634, Blast_Score=200, Evalue=4e-51, Organism=Homo sapiens, GI31982927, Length=644, Percent_Identity=25.776397515528, Blast_Score=192, Evalue=1e-48, Organism=Homo sapiens, GI122937307, Length=554, Percent_Identity=27.7978339350181, Blast_Score=191, Evalue=2e-48, Organism=Homo sapiens, GI115511026, Length=553, Percent_Identity=28.0289330922242, Blast_Score=190, Evalue=4e-48, Organism=Homo sapiens, GI38505220, Length=512, Percent_Identity=28.7109375, Blast_Score=187, Evalue=2e-47, Organism=Homo sapiens, GI58082049, Length=509, Percent_Identity=27.5049115913556, Blast_Score=176, Evalue=6e-44, Organism=Homo sapiens, GI157311624, Length=513, Percent_Identity=27.4853801169591, Blast_Score=170, Evalue=3e-42, Organism=Homo sapiens, GI157311622, Length=513, Percent_Identity=27.4853801169591, Blast_Score=170, Evalue=3e-42, Organism=Homo sapiens, GI187761345, Length=576, Percent_Identity=26.3888888888889, Blast_Score=122, Evalue=1e-27, Organism=Homo sapiens, GI187761343, Length=576, Percent_Identity=26.3888888888889, Blast_Score=122, Evalue=1e-27, Organism=Homo sapiens, GI195947378, Length=408, Percent_Identity=25.7352941176471, Blast_Score=108, Evalue=2e-23, Organism=Homo sapiens, GI42544134, Length=333, Percent_Identity=26.1261261261261, Blast_Score=104, Evalue=3e-22, Organism=Escherichia coli, GI1790505, Length=644, Percent_Identity=66.9254658385093, Blast_Score=914, Evalue=0.0, Organism=Escherichia coli, GI1786529, Length=629, Percent_Identity=38.4737678855326, Blast_Score=420, Evalue=1e-118, Organism=Escherichia coli, GI221142682, Length=521, Percent_Identity=23.4165067178503, Blast_Score=110, Evalue=2e-25, Organism=Escherichia coli, GI145693145, Length=543, Percent_Identity=23.9410681399632, Blast_Score=106, Evalue=4e-24, Organism=Escherichia coli, GI1788107, Length=544, Percent_Identity=24.6323529411765, Blast_Score=105, Evalue=7e-24, Organism=Escherichia coli, GI1786810, Length=566, Percent_Identity=21.5547703180212, Blast_Score=81, Evalue=2e-16, Organism=Caenorhabditis elegans, GI71983001, Length=642, Percent_Identity=49.5327102803738, Blast_Score=619, Evalue=1e-177, Organism=Caenorhabditis elegans, GI71982997, Length=642, Percent_Identity=49.5327102803738, Blast_Score=617, Evalue=1e-177, Organism=Caenorhabditis elegans, GI17569507, Length=642, Percent_Identity=21.3395638629283, Blast_Score=130, Evalue=3e-30, Organism=Caenorhabditis elegans, GI17557194, Length=553, Percent_Identity=24.4122965641953, Blast_Score=109, Evalue=3e-24, Organism=Caenorhabditis elegans, GI32563687, Length=527, Percent_Identity=23.719165085389, Blast_Score=106, Evalue=4e-23, Organism=Caenorhabditis elegans, GI17559526, Length=586, Percent_Identity=24.061433447099, Blast_Score=104, Evalue=1e-22, Organism=Caenorhabditis elegans, GI17558820, Length=516, Percent_Identity=23.2558139534884, Blast_Score=101, Evalue=1e-21, Organism=Caenorhabditis elegans, GI17538037, Length=138, Percent_Identity=34.7826086956522, Blast_Score=84, Evalue=2e-16, Organism=Saccharomyces cerevisiae, GI6323182, Length=642, Percent_Identity=47.6635514018692, Blast_Score=617, Evalue=1e-177, Organism=Saccharomyces cerevisiae, GI6319264, Length=638, Percent_Identity=47.4921630094044, Blast_Score=595, Evalue=1e-171, Organism=Saccharomyces cerevisiae, GI6319699, Length=367, Percent_Identity=24.2506811989101, Blast_Score=105, Evalue=3e-23, Organism=Drosophila melanogaster, GI24667955, Length=659, Percent_Identity=54.4764795144158, Blast_Score=712, Evalue=0.0, Organism=Drosophila melanogaster, GI62472339, Length=563, Percent_Identity=57.9040852575488, Blast_Score=660, Evalue=0.0, Organism=Drosophila melanogaster, GI24667959, Length=521, Percent_Identity=58.1573896353167, Blast_Score=611, Evalue=1e-175, Organism=Drosophila melanogaster, GI21355225, Length=634, Percent_Identity=37.0662460567823, Blast_Score=384, Evalue=1e-106, Organism=Drosophila melanogaster, GI18859661, Length=537, Percent_Identity=26.2569832402235, Blast_Score=110, Evalue=5e-24, Organism=Drosophila melanogaster, GI21355181, Length=515, Percent_Identity=24.0776699029126, Blast_Score=101, Evalue=2e-21, Organism=Drosophila melanogaster, GI24581924, Length=380, Percent_Identity=22.3684210526316, Blast_Score=73, Evalue=6e-13, Organism=Drosophila melanogaster, GI24648260, Length=372, Percent_Identity=25, Blast_Score=70, Evalue=5e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): ACSA_NOVAD (Q2G512)
Other databases:
- EMBL: CP000248 - RefSeq: YP_497895.1 - ProteinModelPortal: Q2G512 - SMR: Q2G512 - STRING: Q2G512 - GeneID: 3917040 - GenomeReviews: CP000248_GR - KEGG: nar:Saro_2625 - NMPDR: fig|48935.1.peg.2373 - eggNOG: COG0365 - HOGENOM: HBG547964 - OMA: LVHEANE - PhylomeDB: Q2G512 - BioCyc: NARO279238:SARO_2625-MONOMER - HAMAP: MF_01123 - InterPro: IPR011904 - InterPro: IPR020845 - InterPro: IPR000873 - TIGRFAMs: TIGR02188
Pfam domain/function: PF00501 AMP-binding
EC number: =6.2.1.1
Molecular weight: Translated: 71888; Mature: 71757
Theoretical pI: Translated: 4.93; Mature: 4.93
Prosite motif: PS00455 AMP_BINDING
Important sites: ACT_SITE 515-515
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGEAVYPVPAEWAQNALVDEARYQDMYRQSVDDPEGFWAEHGKRIDWIRPFTKVKNTSFH CCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHCCCEECHHCCHHHHCCCCCC EADFGIRWFEDGTLNLAANCLDRHLAERGDEIAILWEPDSPDEAHREITYRQLHADVCRF CCCCCEEEECCCCHHHHHHHHHHHHHHCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHH ANLLKAKGVQKGERVTIYLPMVPEAAVAMLACARIGAIHSIVFAGFSPDALAGRITDCDS HHHHHHCCCCCCCEEEEEEECCCHHHHHHHHHHHHHHHHHHHCCCCCCHHHCCCEECCCC RIVLTSDEGLRGGRKVPLKANVDEALKQCPGVDTVIMLRRTGADVDFVEGRDIDWATAVA EEEEECCCCCCCCCCCCEECCHHHHHHHCCCCCEEEEEEECCCCEEEECCCCCCHHHHHH EQSADCQPEEMNAEDPLFILYTSGSTGKPKGVLHTTGGYSVWASMTHQYVFDYRPGQIYW HCCCCCCHHHCCCCCCEEEEEECCCCCCCCCEEECCCCHHHHHHHHHEEEEEECCCEEEE CAADIGWVTGHSYVVYGPLMNGATTVMFEGVPNFPDASRFWQVVDKFKVEIFYGAPTALR EECCCCEECCCCEEEEECCCCCCEEEEECCCCCCCCHHHHHHHHHHEEEEEEECCHHHHH ALMREGDEWVKKTSRASLRLLGSVGEPINPEAWEWYHKVVGDSRCPIVDTWWQTETGGAM HHHHCCHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCCCCEEECCCCCCCCCEE ITPLPGATALKPGSASRPFFGVKPALVDNDGTFLEGATDGCLVVTDSWPGQMRTVWGDHE EECCCCCCCCCCCCCCCCCCCCCCEEECCCCCEEECCCCCEEEEECCCCCCEEECCCCHH RFFQTYFTTFKGLYFTGDGCRRDEDGYYWITGRIDDVINVSGHRMGTAEIESALVAHPKV HHHHHHHHHHCCEEEECCCCCCCCCCEEEEEECCCCEEECCCCCCCHHHHHHHHHCCCCH AEAAVVGMPHDIKGQGIYAFVTCNAEIEPDDLLRKELIQWVRHEIGPIATPDVIQFAPGL HHHEEECCCCCCCCCCEEEEEEECCCCCHHHHHHHHHHHHHHHHCCCCCCCHHHHHCCCC PKTRSGKIMRRILRKIGENDVSNLGDTSTLADPSVVDNLLANRPQLAGA CCCCCCHHHHHHHHHHCCCHHHHCCCCCCCCCHHHHHHHHHCCCCCCCC >Mature Secondary Structure GEAVYPVPAEWAQNALVDEARYQDMYRQSVDDPEGFWAEHGKRIDWIRPFTKVKNTSFH CCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHCCCEECHHCCHHHHCCCCCC EADFGIRWFEDGTLNLAANCLDRHLAERGDEIAILWEPDSPDEAHREITYRQLHADVCRF CCCCCEEEECCCCHHHHHHHHHHHHHHCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHH ANLLKAKGVQKGERVTIYLPMVPEAAVAMLACARIGAIHSIVFAGFSPDALAGRITDCDS HHHHHHCCCCCCCEEEEEEECCCHHHHHHHHHHHHHHHHHHHCCCCCCHHHCCCEECCCC RIVLTSDEGLRGGRKVPLKANVDEALKQCPGVDTVIMLRRTGADVDFVEGRDIDWATAVA EEEEECCCCCCCCCCCCEECCHHHHHHHCCCCCEEEEEEECCCCEEEECCCCCCHHHHHH EQSADCQPEEMNAEDPLFILYTSGSTGKPKGVLHTTGGYSVWASMTHQYVFDYRPGQIYW HCCCCCCHHHCCCCCCEEEEEECCCCCCCCCEEECCCCHHHHHHHHHEEEEEECCCEEEE CAADIGWVTGHSYVVYGPLMNGATTVMFEGVPNFPDASRFWQVVDKFKVEIFYGAPTALR EECCCCEECCCCEEEEECCCCCCEEEEECCCCCCCCHHHHHHHHHHEEEEEEECCHHHHH ALMREGDEWVKKTSRASLRLLGSVGEPINPEAWEWYHKVVGDSRCPIVDTWWQTETGGAM HHHHCCHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCCCCEEECCCCCCCCCEE ITPLPGATALKPGSASRPFFGVKPALVDNDGTFLEGATDGCLVVTDSWPGQMRTVWGDHE EECCCCCCCCCCCCCCCCCCCCCCEEECCCCCEEECCCCCEEEEECCCCCCEEECCCCHH RFFQTYFTTFKGLYFTGDGCRRDEDGYYWITGRIDDVINVSGHRMGTAEIESALVAHPKV HHHHHHHHHHCCEEEECCCCCCCCCCEEEEEECCCCEEECCCCCCCHHHHHHHHHCCCCH AEAAVVGMPHDIKGQGIYAFVTCNAEIEPDDLLRKELIQWVRHEIGPIATPDVIQFAPGL HHHEEECCCCCCCCCCEEEEEEECCCCCHHHHHHHHHHHHHHHHCCCCCCCHHHHHCCCC PKTRSGKIMRRILRKIGENDVSNLGDTSTLADPSVVDNLLANRPQLAGA CCCCCCHHHHHHHHHHCCCHHHHCCCCCCCCCHHHHHHHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA