| Definition | Novosphingobium aromaticivorans DSM 12444 chromosome, complete genome. |
|---|---|
| Accession | NC_007794 |
| Length | 3,561,584 |
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The map label for this gene is envZ [H]
Identifier: 87200631
GI number: 87200631
Start: 2832091
End: 2833401
Strand: Reverse
Name: envZ [H]
Synonym: Saro_2618
Alternate gene names: 87200631
Gene position: 2833401-2832091 (Counterclockwise)
Preceding gene: 87200632
Following gene: 87200630
Centisome position: 79.55
GC content: 66.97
Gene sequence:
>1311_bases TTGACCTTCCTGCGCAGGTCCGGACTGCCCGAGCGGCTGCTGGCGATCCTGCTGCTGGTCGCTGGCGTGGATTTCGCCGC GAATACCCTGCTGTTTGACCGCGCCAGCCGTTTTGCCCTGCGCGAGGACGATGCCGCGCGCGTCGCCGAGCATCTCGTCA TCGCCAGCCGCGCGATCGAGCGCACTCCAGCGGCCGAGCGCGAGAAGATCACTCGCGAACTCAGCACGCCGCGTTTCTCG CTGCGCTGGAGCGAGCGCGGGCCGCGACCCGCGGGCTCGGTGGCGCTCGGCACCATGCGTGAGCAGATTCTCGACATTAC CGGCGAGTTCGACCACGCCGACCTGCAACTTCATCTCAAGCCGCTTGGCAGTCCGGGGAACGTTGTCGGCTCCGTACTGC TCTCGGATCGCAGCGTCCTGACCTTCCAGACTTATGCCAGCGATGCCTGGACGCTGAACGCGGGCCGCATCGCCACGCTG CTTCTGCCAACGCTCGTCCTGGTGGTGCTGGCCTGGGTGCTGTTCCGGGCAACCCTGGCGCCTCTGGGCGTGCTTGTCCG GGCCACGCGCAAGGTCGGCTCCGACACGCCGGAAGCCGTGGCAGAGCAGGGGACCGACGAGGTGCGCGAGCTTATCCGCG CCTTCAACCAGATGCAGCAGCGCATCCATCGCTCGATGACCGACCGGATGCAGTCCATGCTGGCGATCGGGCACGACCTG CGCACGCCGCTCGCCCGCATGCAGCTTCGGCTGGAAAATGCCGGGCTCGATGCCCAGACCCGCGACGAGATGGCGGTCGA CCTTGGCGAGATGCGCCACATGCTGGAATCGCTCCAGGCCTTCGTGGAAAGCGGCGGCTCGCGCCTTCCGGCCGAACGCG TCGACGTCGCAGTCATGGCCCAGACGCTTGTAGATACGGCAGCCGATGAAGGCCGCGATGCATATTTCCACGGTCTCGAA AGCCTCGAGATCATGGCTCGCCCGGTCTCGCTTCGCCGCGCGCTGTCGAACCTTCTCGAAAACGCGCTTCACTACGCGGG CAATGTCCACGTCACTGTGCGCCGCGATGGCGACATGGCGGAGATCGTGTTCGAGGACGATGGCCCGGGCATTCCGGAGG ACCGGCTCGACGATGTCCTCCAGCCCTTCGTGCGGCTCGACGTGGCGCGCAAGCGGGATACGCCGGGGATGGGGCTGGGC CTGCCCATCGTCAGCAGGGCGGTGAAGCTTGAAGGCGGAAGCCTCGACCTGCGCAACAAGCCGGGCGGGGGGCTGGCGGT TACGGTCCGTTTGCCTTGTGCGACTAGCTGA
Upstream 100 bases:
>100_bases TCAGCCGCCTCCGCCGCAAGCTGTCCGCTGCGGGGGGCAATGCACCGATCGTCACGGTGCGCGGCGTTGGCTATATGTTC AGGGCCGAGGTCGCGCGCAG
Downstream 100 bases:
>100_bases ATCTCAAAGAAATATTTCGTAACCTTGGCGCCCAAGAGAGGCAAAGGCGAAGAGTTACCTTGGTTCACAATCGCGGCATC CCTGTCGCGGTCAACCGCTC
Product: periplasmic sensor signal transduction histidine kinase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 436; Mature: 435
Protein sequence:
>436_residues MTFLRRSGLPERLLAILLLVAGVDFAANTLLFDRASRFALREDDAARVAEHLVIASRAIERTPAAEREKITRELSTPRFS LRWSERGPRPAGSVALGTMREQILDITGEFDHADLQLHLKPLGSPGNVVGSVLLSDRSVLTFQTYASDAWTLNAGRIATL LLPTLVLVVLAWVLFRATLAPLGVLVRATRKVGSDTPEAVAEQGTDEVRELIRAFNQMQQRIHRSMTDRMQSMLAIGHDL RTPLARMQLRLENAGLDAQTRDEMAVDLGEMRHMLESLQAFVESGGSRLPAERVDVAVMAQTLVDTAADEGRDAYFHGLE SLEIMARPVSLRRALSNLLENALHYAGNVHVTVRRDGDMAEIVFEDDGPGIPEDRLDDVLQPFVRLDVARKRDTPGMGLG LPIVSRAVKLEGGSLDLRNKPGGGLAVTVRLPCATS
Sequences:
>Translated_436_residues MTFLRRSGLPERLLAILLLVAGVDFAANTLLFDRASRFALREDDAARVAEHLVIASRAIERTPAAEREKITRELSTPRFS LRWSERGPRPAGSVALGTMREQILDITGEFDHADLQLHLKPLGSPGNVVGSVLLSDRSVLTFQTYASDAWTLNAGRIATL LLPTLVLVVLAWVLFRATLAPLGVLVRATRKVGSDTPEAVAEQGTDEVRELIRAFNQMQQRIHRSMTDRMQSMLAIGHDL RTPLARMQLRLENAGLDAQTRDEMAVDLGEMRHMLESLQAFVESGGSRLPAERVDVAVMAQTLVDTAADEGRDAYFHGLE SLEIMARPVSLRRALSNLLENALHYAGNVHVTVRRDGDMAEIVFEDDGPGIPEDRLDDVLQPFVRLDVARKRDTPGMGLG LPIVSRAVKLEGGSLDLRNKPGGGLAVTVRLPCATS >Mature_435_residues TFLRRSGLPERLLAILLLVAGVDFAANTLLFDRASRFALREDDAARVAEHLVIASRAIERTPAAEREKITRELSTPRFSL RWSERGPRPAGSVALGTMREQILDITGEFDHADLQLHLKPLGSPGNVVGSVLLSDRSVLTFQTYASDAWTLNAGRIATLL LPTLVLVVLAWVLFRATLAPLGVLVRATRKVGSDTPEAVAEQGTDEVRELIRAFNQMQQRIHRSMTDRMQSMLAIGHDLR TPLARMQLRLENAGLDAQTRDEMAVDLGEMRHMLESLQAFVESGGSRLPAERVDVAVMAQTLVDTAADEGRDAYFHGLES LEIMARPVSLRRALSNLLENALHYAGNVHVTVRRDGDMAEIVFEDDGPGIPEDRLDDVLQPFVRLDVARKRDTPGMGLGL PIVSRAVKLEGGSLDLRNKPGGGLAVTVRLPCATS
Specific function: Member of the two-component regulatory system envZ/ompR involved in the regulation of osmoregulation (genes ompF and ompC). EnvZ functions as a membrane-associated protein kinase that phosphorylates ompR in response to environmental signals [H]
COG id: COG0642
COG function: function code T; Signal transduction histidine kinase
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 histidine kinase domain [H]
Homologues:
Organism=Escherichia coli, GI1789808, Length=403, Percent_Identity=29.5285359801489, Blast_Score=130, Evalue=2e-31, Organism=Escherichia coli, GI1790346, Length=242, Percent_Identity=31.8181818181818, Blast_Score=97, Evalue=1e-21, Organism=Escherichia coli, GI1788393, Length=272, Percent_Identity=26.8382352941176, Blast_Score=95, Evalue=7e-21, Organism=Escherichia coli, GI1787894, Length=227, Percent_Identity=33.0396475770925, Blast_Score=95, Evalue=8e-21, Organism=Escherichia coli, GI1786600, Length=227, Percent_Identity=29.9559471365639, Blast_Score=85, Evalue=1e-17, Organism=Escherichia coli, GI1790551, Length=286, Percent_Identity=27.2727272727273, Blast_Score=78, Evalue=1e-15, Organism=Escherichia coli, GI87082128, Length=297, Percent_Identity=25.2525252525253, Blast_Score=75, Evalue=8e-15, Organism=Escherichia coli, GI1786783, Length=225, Percent_Identity=26.6666666666667, Blast_Score=74, Evalue=1e-14, Organism=Escherichia coli, GI87081816, Length=248, Percent_Identity=29.0322580645161, Blast_Score=73, Evalue=4e-14, Organism=Escherichia coli, GI145693157, Length=107, Percent_Identity=34.5794392523364, Blast_Score=72, Evalue=8e-14, Organism=Escherichia coli, GI1786912, Length=220, Percent_Identity=29.0909090909091, Blast_Score=69, Evalue=6e-13, Organism=Escherichia coli, GI1790861, Length=292, Percent_Identity=25.3424657534247, Blast_Score=67, Evalue=2e-12, Organism=Escherichia coli, GI1788713, Length=262, Percent_Identity=24.4274809160305, Blast_Score=66, Evalue=4e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003594 - InterPro: IPR003660 - InterPro: IPR004358 - InterPro: IPR003661 - InterPro: IPR005467 - InterPro: IPR009082 [H]
Pfam domain/function: PF00672 HAMP; PF02518 HATPase_c; PF00512 HisKA [H]
EC number: =2.7.13.3 [H]
Molecular weight: Translated: 47835; Mature: 47704
Theoretical pI: Translated: 6.26; Mature: 6.26
Prosite motif: PS50885 HAMP ; PS50109 HIS_KIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTFLRRSGLPERLLAILLLVAGVDFAANTLLFDRASRFALREDDAARVAEHLVIASRAIE CCCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHH RTPAAEREKITRELSTPRFSLRWSERGPRPAGSVALGTMREQILDITGEFDHADLQLHLK CCCCHHHHHHHHHHCCCCEEEEECCCCCCCCCCHHHHHHHHHHHHHCCCCCCCEEEEEEE PLGSPGNVVGSVLLSDRSVLTFQTYASDAWTLNAGRIATLLLPTLVLVVLAWVLFRATLA ECCCCHHHHHHHHHCCCCEEEEEEECCCCEEECCCHHHHHHHHHHHHHHHHHHHHHHHHH PLGVLVRATRKVGSDTPEAVAEQGTDEVRELIRAFNQMQQRIHRSMTDRMQSMLAIGHDL HHHHHHHHHHHHCCCCHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH RTPLARMQLRLENAGLDAQTRDEMAVDLGEMRHMLESLQAFVESGGSRLPAERVDVAVMA HHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHH QTLVDTAADEGRDAYFHGLESLEIMARPVSLRRALSNLLENALHYAGNVHVTVRRDGDMA HHHHHHHHCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCEEEEEEECCCEE EIVFEDDGPGIPEDRLDDVLQPFVRLDVARKRDTPGMGLGLPIVSRAVKLEGGSLDLRNK EEEEECCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHEECCCCEECCCC PGGGLAVTVRLPCATS CCCCEEEEEECCCCCC >Mature Secondary Structure TFLRRSGLPERLLAILLLVAGVDFAANTLLFDRASRFALREDDAARVAEHLVIASRAIE CCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHH RTPAAEREKITRELSTPRFSLRWSERGPRPAGSVALGTMREQILDITGEFDHADLQLHLK CCCCHHHHHHHHHHCCCCEEEEECCCCCCCCCCHHHHHHHHHHHHHCCCCCCCEEEEEEE PLGSPGNVVGSVLLSDRSVLTFQTYASDAWTLNAGRIATLLLPTLVLVVLAWVLFRATLA ECCCCHHHHHHHHHCCCCEEEEEEECCCCEEECCCHHHHHHHHHHHHHHHHHHHHHHHHH PLGVLVRATRKVGSDTPEAVAEQGTDEVRELIRAFNQMQQRIHRSMTDRMQSMLAIGHDL HHHHHHHHHHHHCCCCHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH RTPLARMQLRLENAGLDAQTRDEMAVDLGEMRHMLESLQAFVESGGSRLPAERVDVAVMA HHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHH QTLVDTAADEGRDAYFHGLESLEIMARPVSLRRALSNLLENALHYAGNVHVTVRRDGDMA HHHHHHHHCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCEEEEEEECCCEE EIVFEDDGPGIPEDRLDDVLQPFVRLDVARKRDTPGMGLGLPIVSRAVKLEGGSLDLRNK EEEEECCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHEECCCCEECCCC PGGGLAVTVRLPCATS CCCCEEEEEECCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 6292200; 2997120; 9278503; 8132603; 2277041; 2824492; 1323560; 9817206; 10426948 [H]