| Definition | Novosphingobium aromaticivorans DSM 12444 chromosome, complete genome. |
|---|---|
| Accession | NC_007794 |
| Length | 3,561,584 |
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The map label for this gene is fixH [H]
Identifier: 87200586
GI number: 87200586
Start: 2777401
End: 2777871
Strand: Reverse
Name: fixH [H]
Synonym: Saro_2573
Alternate gene names: 87200586
Gene position: 2777871-2777401 (Counterclockwise)
Preceding gene: 87200587
Following gene: 87200585
Centisome position: 78.0
GC content: 66.45
Gene sequence:
>471_bases GTGACCCAGCAGCGCCGTACCGTTCGTCCGTTCACCGGCAAGAAGATGGCCGCGATCCTCGTCGCCTTCTTTGCAGTGGT CATTTCCGTCAACGTGCTGATGGCGCGGCTTGCCACGTCGACCTTCGGCGGGGTGGTGGTCAACGATAGCTACCTTGCCG GCCAGCACTTCAACCGCTGGCTCAAGGAAGCGAAGGTCGAGCAGGCGCTCGGCTGGAAGGGCGATCTTGCCCGCGACGGC CAGGGCCACGCCGAGATCGCCTTGTTCGACAGCATGGGTAAGCCGATCTCTGCCGCCAGGGTCACCGCGATCGCGGAACA CCCGCTCGGCCGCCGTCCGCTTGCCGACCTCGTGCTGCACGAGACGCTGCCCGGCGTTTACGCTGCCCCGCTTGAAGCCG GTCGCTGGCGCCTGCGGGTGACTGTCGAGGCCGAAGGCAAGGTCTGGCGCACGGTCGGGGAAGTGTTGTGA
Upstream 100 bases:
>100_bases GCGAGCCGGCTGAGTTCGCCTTCGTGATGACCGCCACCGACCGCGATGGCGGGACGGATCGCAGCGAAACCACCTTCACG ACAGCACAAGGAAACGGCCA
Downstream 100 bases:
>100_bases ACACTCTCGCGCGCAGGTCGGCCGAGCCAGTGCCCGCGGTCCACACCGTTCTGGCTGTCCCGGGCATGCATTGCGCGGGT TGCATGGGCAAGGTCGAGCG
Product: integral membrane protein linked to a cation pump-like
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 156; Mature: 155
Protein sequence:
>156_residues MTQQRRTVRPFTGKKMAAILVAFFAVVISVNVLMARLATSTFGGVVVNDSYLAGQHFNRWLKEAKVEQALGWKGDLARDG QGHAEIALFDSMGKPISAARVTAIAEHPLGRRPLADLVLHETLPGVYAAPLEAGRWRLRVTVEAEGKVWRTVGEVL
Sequences:
>Translated_156_residues MTQQRRTVRPFTGKKMAAILVAFFAVVISVNVLMARLATSTFGGVVVNDSYLAGQHFNRWLKEAKVEQALGWKGDLARDG QGHAEIALFDSMGKPISAARVTAIAEHPLGRRPLADLVLHETLPGVYAAPLEAGRWRLRVTVEAEGKVWRTVGEVL >Mature_155_residues TQQRRTVRPFTGKKMAAILVAFFAVVISVNVLMARLATSTFGGVVVNDSYLAGQHFNRWLKEAKVEQALGWKGDLARDGQ GHAEIALFDSMGKPISAARVTAIAEHPLGRRPLADLVLHETLPGVYAAPLEAGRWRLRVTVEAEGKVWRTVGEVL
Specific function: The four proteins fixG, fixH, fixI, and fixS may participate in a membrane-bound complex coupling the fixI cation pump with a redox process catalyzed by fixG [H]
COG id: COG5456
COG function: function code P; Predicted integral membrane protein linked to a cation pump
Gene ontology:
Cell location: Cell membrane [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR008620 - InterPro: IPR018037 [H]
Pfam domain/function: PF05751 FixH [H]
EC number: NA
Molecular weight: Translated: 17074; Mature: 16943
Theoretical pI: Translated: 10.72; Mature: 10.72
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTQQRRTVRPFTGKKMAAILVAFFAVVISVNVLMARLATSTFGGVVVNDSYLAGQHFNRW CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCHHHHHHHHH LKEAKVEQALGWKGDLARDGQGHAEIALFDSMGKPISAARVTAIAEHPLGRRPLADLVLH HHHHHHHHHCCCCCCCCCCCCCCEEEEEECCCCCCHHHHHHHHHHHCCCCCCCHHHHHHH ETLPGVYAAPLEAGRWRLRVTVEAEGKVWRTVGEVL HHCCCCEECCCCCCCEEEEEEEECCCCHHHHHHHCC >Mature Secondary Structure TQQRRTVRPFTGKKMAAILVAFFAVVISVNVLMARLATSTFGGVVVNDSYLAGQHFNRW CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCHHHHHHHHH LKEAKVEQALGWKGDLARDGQGHAEIALFDSMGKPISAARVTAIAEHPLGRRPLADLVLH HHHHHHHHHCCCCCCCCCCCCCCEEEEEECCCCCCHHHHHHHHHHHCCCCCCCHHHHHHH ETLPGVYAAPLEAGRWRLRVTVEAEGKVWRTVGEVL HHCCCCEECCCCCCCEEEEEEEECCCCHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 2536685; 11481432 [H]