| Definition | Novosphingobium aromaticivorans DSM 12444 chromosome, complete genome. |
|---|---|
| Accession | NC_007794 |
| Length | 3,561,584 |
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The map label for this gene is fixI [H]
Identifier: 87200585
GI number: 87200585
Start: 2775281
End: 2777404
Strand: Reverse
Name: fixI [H]
Synonym: Saro_2572
Alternate gene names: 87200585
Gene position: 2777404-2775281 (Counterclockwise)
Preceding gene: 87200586
Following gene: 87200584
Centisome position: 77.98
GC content: 68.88
Gene sequence:
>2124_bases GTGAACACTCTCGCGCGCAGGTCGGCCGAGCCAGTGCCCGCGGTCCACACCGTTCTGGCTGTCCCGGGCATGCATTGCGC GGGTTGCATGGGCAAGGTCGAGCGCGCGCTCGGCGCGGTCGAGGGCGTTGCCAGCGCGCGCACAAACCTGACCGCGCGCA CGGTCGAGGTCATCCATGCACCCGCGATCGAAACGCCCGCGCTCGTTGCCGCACTTGCCGCAACCGGCTTCGAGGCCCAG CCGCGCGAGATCGAGGCCGAGCCGGTATCTGCGGTGAAGCCGCTGCTCGCGCCGCTTGGCGTGGCCGCCTTCGCCTGCAT GAACGTCATGCTCATGTCGGTCAGCGTCTGGTCGGGGGCGGATGGCACGACGCGGTCGCTGTTCCACTGGGTCTCGGCGC TGATCGGCGTTCCCGCCATCGTCTATGCCGGGCGGCCATTCTTCGCCTCGGCGTGGAAGGTGCTGCGCCATGGCAGGACC AACATGGACGTGCCGATCTCCATCGGCGTCACCATCGCCACCGGCCTCTCGTTCTATGAAACGCTGACCGGCGGGGCAGA GGCGTGGTTCGACGGCGTTCTCATGCTCCTGATGTTCCTCCTGGCAGGCCGCGTGCTCGATGCGATGATGCGCGACCGCG CCCGCTCGGGCGTCGATGCGCTGCTGCGCCAGGTTGCCACCGGCACGATGGTGGTCGATGCCGACGGTTCGACCCGCTGG GTGGAGGCAAAGTCGCTCGAGCCTGGCATGATCATGCGGGTTGCCTCGGGCGAGCGCCTTGCGGCCGATGGTGCGATCGT TCGCGGCACCAGCCGGTTCGACCAGTCGTTGCTTACCGGTGAGAGCGAACCCGTCAACGCCGGGCCGGGAAGCATTGTCC ACGCGGGCACGCTCAACGTCGAACTGCCGGTCGATGTGCGCGTGACCGCCATCGGCCGCGATACCGCCTTGTCAGAGATC GCCCGCCTGATGGAAGCGGCCGGCCAGTCGCGGTCGAAGTACGTGCGCATTGCCGACCGTGCCTCGCGGCTTTACGCACC AGCCGTCCATACGCTCGCGGCGCTGACGTTCGTCGGCTGGATGATCGCGGGCGCAGGCGTCTACAAGTCGCTGGTCATCG CGATCGCAGTGCTCATCATTACCTGCCCTTGTGCGCTTGGCCTTGCGGTGCCGGTGGCGCAGGTCGTTGCCGCGGGTGCG CTGATGAAGCGCGGCGTGTTGGTGAAGGACGGCTCCGCGCTCGAACGCATGGCCGAAGTCGACCGCCTCCTGCTCGACAA GACCGGTACGCTGACGCTCGGTCGCCCGGTTCCCGACGAAGCGGCCCTCGACGCCCTGTCCGGCGCCGAAGCCTCTGTCG CCCTCGCGCTCGCCAGTCACAGTCGCCACCCCCTGTCGCTGGGTCTCGTGCAGGCCCTCGGCGCGCGCGGTGTCCTCGCG GCGGCCCTGGAAGATGTGGTGGAAGAGCCGGGGAAGGGCGTGAGCGGCAAATGGAATGGCCTTGCGGTGTCGCTCGGTCG CCCGCAATCGGCCCAGGGCATGGCCACGGCGCTTCATGTTGAGGGCGGGCCGGTCCGTGTCATCGCCTTTGCCGACCGGC TTCGTCCCGACGCCGAAGCCGCGCTCGGGCAGTTGTCGAGCATGGGTGTTCCAGCCTCCATCCTCTCCGGCGATTCCATC CCTGCGGTCGCCGCCGTCTCGCGCGCGACGGGTCTCACCGCGCAGGCCGCCGCCAGCCCGATGGAGAAGCAGGAAGCCAT CGAGCGTCTCCAGGCAGCGGGGCGCACCGTGCTTATGGCGGGCGACGGGTTGAACGATGGTCCGGCGCTTGCCGCCGCCA ACGCCTCGATCGCCCCCGGTTCTGCCAGCGACGTCGGTCGGCAGGCTGCGGACATGGTGTTCACCGGCGATTCCCTGCTC GCCATCCCTCGCGCGGTGCGGGTGGCCCGCGCCACCATGCGGGTCGTGCGCCAGAACTTCGTCCTCGCCATCGGCTACAA CGCGCTGGCGGTGCCGCTGGCGATCCTTGGCCACGTTACCCCGCTCATCGCTGCCATCGCCATGTCGACCAGCTCGCTTG TCGTCGTGGCCAATTCGCTGCGTCTTGCCGGAGAAGCGAAATGA
Upstream 100 bases:
>100_bases TGCCCGGCGTTTACGCTGCCCCGCTTGAAGCCGGTCGCTGGCGCCTGCGGGTGACTGTCGAGGCCGAAGGCAAGGTCTGG CGCACGGTCGGGGAAGTGTT
Downstream 100 bases:
>100_bases ACGGCATCGCCTTCATGCTCCCGATCGCCCTTGGCATGGGCCTGTTCGGACTGGCCTCCTTCTTCTGGGCTCTCAAGCGC GGGCAGTTCAGCGATCTCGA
Product: heavy metal translocating P-type ATPase
Products: ADP; Orthophosphate. [C]
Alternate protein names: E1-E2 type cation ATPase FixI [H]
Number of amino acids: Translated: 707; Mature: 707
Protein sequence:
>707_residues MNTLARRSAEPVPAVHTVLAVPGMHCAGCMGKVERALGAVEGVASARTNLTARTVEVIHAPAIETPALVAALAATGFEAQ PREIEAEPVSAVKPLLAPLGVAAFACMNVMLMSVSVWSGADGTTRSLFHWVSALIGVPAIVYAGRPFFASAWKVLRHGRT NMDVPISIGVTIATGLSFYETLTGGAEAWFDGVLMLLMFLLAGRVLDAMMRDRARSGVDALLRQVATGTMVVDADGSTRW VEAKSLEPGMIMRVASGERLAADGAIVRGTSRFDQSLLTGESEPVNAGPGSIVHAGTLNVELPVDVRVTAIGRDTALSEI ARLMEAAGQSRSKYVRIADRASRLYAPAVHTLAALTFVGWMIAGAGVYKSLVIAIAVLIITCPCALGLAVPVAQVVAAGA LMKRGVLVKDGSALERMAEVDRLLLDKTGTLTLGRPVPDEAALDALSGAEASVALALASHSRHPLSLGLVQALGARGVLA AALEDVVEEPGKGVSGKWNGLAVSLGRPQSAQGMATALHVEGGPVRVIAFADRLRPDAEAALGQLSSMGVPASILSGDSI PAVAAVSRATGLTAQAAASPMEKQEAIERLQAAGRTVLMAGDGLNDGPALAAANASIAPGSASDVGRQAADMVFTGDSLL AIPRAVRVARATMRVVRQNFVLAIGYNALAVPLAILGHVTPLIAAIAMSTSSLVVVANSLRLAGEAK
Sequences:
>Translated_707_residues MNTLARRSAEPVPAVHTVLAVPGMHCAGCMGKVERALGAVEGVASARTNLTARTVEVIHAPAIETPALVAALAATGFEAQ PREIEAEPVSAVKPLLAPLGVAAFACMNVMLMSVSVWSGADGTTRSLFHWVSALIGVPAIVYAGRPFFASAWKVLRHGRT NMDVPISIGVTIATGLSFYETLTGGAEAWFDGVLMLLMFLLAGRVLDAMMRDRARSGVDALLRQVATGTMVVDADGSTRW VEAKSLEPGMIMRVASGERLAADGAIVRGTSRFDQSLLTGESEPVNAGPGSIVHAGTLNVELPVDVRVTAIGRDTALSEI ARLMEAAGQSRSKYVRIADRASRLYAPAVHTLAALTFVGWMIAGAGVYKSLVIAIAVLIITCPCALGLAVPVAQVVAAGA LMKRGVLVKDGSALERMAEVDRLLLDKTGTLTLGRPVPDEAALDALSGAEASVALALASHSRHPLSLGLVQALGARGVLA AALEDVVEEPGKGVSGKWNGLAVSLGRPQSAQGMATALHVEGGPVRVIAFADRLRPDAEAALGQLSSMGVPASILSGDSI PAVAAVSRATGLTAQAAASPMEKQEAIERLQAAGRTVLMAGDGLNDGPALAAANASIAPGSASDVGRQAADMVFTGDSLL AIPRAVRVARATMRVVRQNFVLAIGYNALAVPLAILGHVTPLIAAIAMSTSSLVVVANSLRLAGEAK >Mature_707_residues MNTLARRSAEPVPAVHTVLAVPGMHCAGCMGKVERALGAVEGVASARTNLTARTVEVIHAPAIETPALVAALAATGFEAQ PREIEAEPVSAVKPLLAPLGVAAFACMNVMLMSVSVWSGADGTTRSLFHWVSALIGVPAIVYAGRPFFASAWKVLRHGRT NMDVPISIGVTIATGLSFYETLTGGAEAWFDGVLMLLMFLLAGRVLDAMMRDRARSGVDALLRQVATGTMVVDADGSTRW VEAKSLEPGMIMRVASGERLAADGAIVRGTSRFDQSLLTGESEPVNAGPGSIVHAGTLNVELPVDVRVTAIGRDTALSEI ARLMEAAGQSRSKYVRIADRASRLYAPAVHTLAALTFVGWMIAGAGVYKSLVIAIAVLIITCPCALGLAVPVAQVVAAGA LMKRGVLVKDGSALERMAEVDRLLLDKTGTLTLGRPVPDEAALDALSGAEASVALALASHSRHPLSLGLVQALGARGVLA AALEDVVEEPGKGVSGKWNGLAVSLGRPQSAQGMATALHVEGGPVRVIAFADRLRPDAEAALGQLSSMGVPASILSGDSI PAVAAVSRATGLTAQAAASPMEKQEAIERLQAAGRTVLMAGDGLNDGPALAAANASIAPGSASDVGRQAADMVFTGDSLL AIPRAVRVARATMRVVRQNFVLAIGYNALAVPLAILGHVTPLIAAIAMSTSSLVVVANSLRLAGEAK
Specific function: FixI is a pump of a specific cation involved in symbiotic nitrogen fixation. The four proteins FixG, FixH, FixI, and FixS may participate in a membrane-bound complex coupling the FixI cation pump with a redox process catalyzed by FixG [H]
COG id: COG2217
COG function: function code P; Cation transport ATPase
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 HMA domain [H]
Homologues:
Organism=Homo sapiens, GI55743071, Length=776, Percent_Identity=27.5773195876289, Blast_Score=246, Evalue=4e-65, Organism=Homo sapiens, GI115529486, Length=557, Percent_Identity=28.1867145421903, Blast_Score=184, Evalue=2e-46, Organism=Homo sapiens, GI55743073, Length=493, Percent_Identity=29.2089249492901, Blast_Score=183, Evalue=5e-46, Organism=Escherichia coli, GI1786691, Length=735, Percent_Identity=32.9251700680272, Blast_Score=295, Evalue=9e-81, Organism=Escherichia coli, GI1789879, Length=716, Percent_Identity=30.4469273743017, Blast_Score=221, Evalue=1e-58, Organism=Escherichia coli, GI1786914, Length=434, Percent_Identity=27.8801843317972, Blast_Score=96, Evalue=7e-21, Organism=Escherichia coli, GI2367363, Length=381, Percent_Identity=25.1968503937008, Blast_Score=66, Evalue=7e-12, Organism=Caenorhabditis elegans, GI17556548, Length=339, Percent_Identity=32.7433628318584, Blast_Score=163, Evalue=3e-40, Organism=Saccharomyces cerevisiae, GI6319772, Length=614, Percent_Identity=29.3159609120521, Blast_Score=224, Evalue=4e-59, Organism=Saccharomyces cerevisiae, GI6320475, Length=623, Percent_Identity=26.3242375601926, Blast_Score=201, Evalue=3e-52, Organism=Saccharomyces cerevisiae, GI6321430, Length=257, Percent_Identity=28.7937743190661, Blast_Score=69, Evalue=4e-12, Organism=Saccharomyces cerevisiae, GI6325221, Length=257, Percent_Identity=28.4046692607004, Blast_Score=64, Evalue=8e-11, Organism=Drosophila melanogaster, GI221329854, Length=512, Percent_Identity=28.515625, Blast_Score=174, Evalue=2e-43,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR008250 - InterPro: IPR006403 - InterPro: IPR000695 - InterPro: IPR006416 - InterPro: IPR001757 - InterPro: IPR018303 - InterPro: IPR005834 - InterPro: IPR023214 - InterPro: IPR017969 - InterPro: IPR006121 - InterPro: IPR000150 [H]
Pfam domain/function: PF00122 E1-E2_ATPase; PF00702 Hydrolase [H]
EC number: 3.6.3.4 [C]
Molecular weight: Translated: 72583; Mature: 72583
Theoretical pI: Translated: 7.96; Mature: 7.96
Prosite motif: PS00154 ATPASE_E1_E2 ; PS50846 HMA_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 3.5 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 3.5 %Met (Mature Protein) 4.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNTLARRSAEPVPAVHTVLAVPGMHCAGCMGKVERALGAVEGVASARTNLTARTVEVIHA CCCHHHCCCCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCC PAIETPALVAALAATGFEAQPREIEAEPVSAVKPLLAPLGVAAFACMNVMLMSVSVWSGA CCCCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC DGTTRSLFHWVSALIGVPAIVYAGRPFFASAWKVLRHGRTNMDVPISIGVTIATGLSFYE CCHHHHHHHHHHHHHCCHHHHHCCCCHHHHHHHHHHCCCCCCCCEEEECCHHHHHHHHHH TLTGGAEAWFDGVLMLLMFLLAGRVLDAMMRDRARSGVDALLRQVATGTMVVDADGSTRW HHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCEEEECCCCEEE VEAKSLEPGMIMRVASGERLAADGAIVRGTSRFDQSLLTGESEPVNAGPGSIVHAGTLNV EECCCCCCCEEEEECCCCEEECCCCEEECCHHHHHHHHCCCCCCCCCCCCCEEEECEEEE ELPVDVRVTAIGRDTALSEIARLMEAAGQSRSKYVRIADRASRLYAPAVHTLAALTFVGW EECCEEEEEEECCHHHHHHHHHHHHHHCCCHHHEEEHHHHHHHHHHHHHHHHHHHHHHHH MIAGAGVYKSLVIAIAVLIITCPCALGLAVPVAQVVAAGALMKRGVLVKDGSALERMAEV HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEECCHHHHHHHHH DRLLLDKTGTLTLGRPVPDEAALDALSGAEASVALALASHSRHPLSLGLVQALGARGVLA HHHHHCCCCCEEECCCCCCHHHHHHHCCCCHHEEEEEHHCCCCCHHHHHHHHHCCCHHHH AALEDVVEEPGKGVSGKWNGLAVSLGRPQSAQGMATALHVEGGPVRVIAFADRLRPDAEA HHHHHHHHCCCCCCCCCCCCEEEECCCCCCCCCCEEEEEECCCCEEEEEEHHHCCCCHHH ALGQLSSMGVPASILSGDSIPAVAAVSRATGLTAQAAASPMEKQEAIERLQAAGRTVLMA HHHHHHHCCCCHHHHCCCCCCHHHHHHHHCCCCHHHHCCCHHHHHHHHHHHHCCCEEEEE GDGLNDGPALAAANASIAPGSASDVGRQAADMVFTGDSLLAIPRAVRVARATMRVVRQNF CCCCCCCCCEEECCCCCCCCCHHHHHHHHHCEEECCCCHHHHHHHHHHHHHHHHHHHHCE VLAIGYNALAVPLAILGHVTPLIAAIAMSTSSLVVVANSLRLAGEAK EEEECCHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCC >Mature Secondary Structure MNTLARRSAEPVPAVHTVLAVPGMHCAGCMGKVERALGAVEGVASARTNLTARTVEVIHA CCCHHHCCCCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCC PAIETPALVAALAATGFEAQPREIEAEPVSAVKPLLAPLGVAAFACMNVMLMSVSVWSGA CCCCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC DGTTRSLFHWVSALIGVPAIVYAGRPFFASAWKVLRHGRTNMDVPISIGVTIATGLSFYE CCHHHHHHHHHHHHHCCHHHHHCCCCHHHHHHHHHHCCCCCCCCEEEECCHHHHHHHHHH TLTGGAEAWFDGVLMLLMFLLAGRVLDAMMRDRARSGVDALLRQVATGTMVVDADGSTRW HHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCEEEECCCCEEE VEAKSLEPGMIMRVASGERLAADGAIVRGTSRFDQSLLTGESEPVNAGPGSIVHAGTLNV EECCCCCCCEEEEECCCCEEECCCCEEECCHHHHHHHHCCCCCCCCCCCCCEEEECEEEE ELPVDVRVTAIGRDTALSEIARLMEAAGQSRSKYVRIADRASRLYAPAVHTLAALTFVGW EECCEEEEEEECCHHHHHHHHHHHHHHCCCHHHEEEHHHHHHHHHHHHHHHHHHHHHHHH MIAGAGVYKSLVIAIAVLIITCPCALGLAVPVAQVVAAGALMKRGVLVKDGSALERMAEV HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEECCHHHHHHHHH DRLLLDKTGTLTLGRPVPDEAALDALSGAEASVALALASHSRHPLSLGLVQALGARGVLA HHHHHCCCCCEEECCCCCCHHHHHHHCCCCHHEEEEEHHCCCCCHHHHHHHHHCCCHHHH AALEDVVEEPGKGVSGKWNGLAVSLGRPQSAQGMATALHVEGGPVRVIAFADRLRPDAEA HHHHHHHHCCCCCCCCCCCCEEEECCCCCCCCCCEEEEEECCCCEEEEEEHHHCCCCHHH ALGQLSSMGVPASILSGDSIPAVAAVSRATGLTAQAAASPMEKQEAIERLQAAGRTVLMA HHHHHHHCCCCHHHHCCCCCCHHHHHHHHCCCCHHHHCCCHHHHHHHHHHHHCCCEEEEE GDGLNDGPALAAANASIAPGSASDVGRQAADMVFTGDSLLAIPRAVRVARATMRVVRQNF CCCCCCCCCEEECCCCCCCCCHHHHHHHHHCEEECCCCHHHHHHHHHHHHHHHHHHHHCE VLAIGYNALAVPLAILGHVTPLIAAIAMSTSSLVVVANSLRLAGEAK EEEECCHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: Cu [C]
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: ATP; H2O [C]
Specific reaction: ATP + H2O = ADP + Orthophosphate. [C]
General reaction: Phosphorous acid anhydride hydrolysis [C]
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 2536685; 11481432 [H]