| Definition | Novosphingobium aromaticivorans DSM 12444 chromosome, complete genome. |
|---|---|
| Accession | NC_007794 |
| Length | 3,561,584 |
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The map label for this gene is fixG [H]
Identifier: 87200587
GI number: 87200587
Start: 2777868
End: 2779337
Strand: Reverse
Name: fixG [H]
Synonym: Saro_2574
Alternate gene names: 87200587
Gene position: 2779337-2777868 (Counterclockwise)
Preceding gene: 87200588
Following gene: 87200586
Centisome position: 78.04
GC content: 64.9
Gene sequence:
>1470_bases ATGCACGCGCACGATCCCAAACTGAGCGCGAACACCTCCAGCGAGACCGTCCTCTACGAAAAGCGCAAGTCCGTCTTCCC GAAGGCCGTCAACGGTCCGTTCCGTCGGTTCAAGTGGCTGGTCATGGCCGTGTGCCTCACCATCTACTGGGGCACTCCCT GGATCCGCTGGGACCGTGGTCCCTATGCGCCGGACCAGGCGGTGCTGATCGACCTGGCGAACCGCCGGTTCTTCATGTTC GACATCGAGATCTGGCCGCACGAGTTCTACTTCGTGGCGGGCTTGCTCATCATGGCGGGCATCGGACTGTTCCTCGTCAC CAGCGCGGTGGGGCGCGCGTGGTGCGGGTATGCCTGTCCGCAGACGGTCTGGACCGACCTGTTCCAGCACGTCGACCGCT TCGTCGACGGCGACCGCAACGCCCAGCTCCGTCTGCAGAAGGCGCCCTGGGGGCCGCAGAAGATCGCGAAGCGACTGTTC AAGTGGGGCATCTACCTCGCCATCAGCTTCCTGACCGGCGGTGCGTGGATCTTCTACTTCGCCGACGCGCCGACGCTCCA GCATGACTTCTGGACCGGCAATGCCGCACCCGTCGCCTATGCGACCACCTTCGTGCTGACGATGACGACCTTCGTCCTCG GCGGCTTCCTGCGCGAACAGGTCTGCATCTACATGTGCCCGTGGCCGCGCATCCAGACCGCGATGCTCGACGAGAAGAGC CTGATCGTCACCTACAAGGACTGGCGTGGCGAACCGCGCGGTTCGTTGAAGACCGCGATGAAGGCGGCAACGCCGCTTGG CGACTGCATCGACTGCCTGCAATGCGTTGCGGTGTGTCCCACCGGCATCGACATCCGCGAAGGGCCGCAGGTCGGCTGCA TTACCTGTGCGCTTTGCATCGACGCCTGCGACAAGGCCATGGCCGATGTCGGCCGTCCGCGCGGCCTGATCGACTACTGC ACGCTCGACGATGCCGAGAAGGAAAAGCAGGGCCAGCCTGCCACGCCCTTGCTGAAGACGATCCTGCGTCCGCGTACGCT CGTCTACCTCGGCGTGTGGAGTTCCATCGGACTGGCCATGCTGTTCATGCTCGGCCAGCGCGCCCGGCTCGATCTGTCGG TCGCCAAGGATCGCAATCCGGAATACGTGATGCTTTCCGACGGTGCCATCCGCAACGCCTACACGCTCAAGCTGCGCAAC ATGGAAGAGCGTCCGCGCACCTTCCGCATCGCGCTCGACGGGTTGCAGGGCGGGGCGATCTTCACCGACGAGATGGATGC CGCCGAGGCCGGTCGCCAGATCGAGGTCGATGTGCCCGCAGACACCACCCAGCGCCTGCGCGTCTATGCCCTGCGCCCGC GTGGCAGCGAGCCGGCTGAGTTCGCCTTCGTGATGACCGCCACCGACCGCGATGGCGGGACGGATCGCAGCGAAACCACC TTCACGACAGCACAAGGAAACGGCCAGTGA
Upstream 100 bases:
>100_bases CCACTCGCTGGGCGGCGGCGAGGAAGCTCCCGCTGCCGTTCCCGACCCCGCAGCCGCCCCCGCGGCGGCTGCGAAGTAAC CCGATCAAGGACACACGGCC
Downstream 100 bases:
>100_bases CCCAGCAGCGCCGTACCGTTCGTCCGTTCACCGGCAAGAAGATGGCCGCGATCCTCGTCGCCTTCTTTGCAGTGGTCATT TCCGTCAACGTGCTGATGGC
Product: 4Fe-4S ferredoxin
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 489; Mature: 489
Protein sequence:
>489_residues MHAHDPKLSANTSSETVLYEKRKSVFPKAVNGPFRRFKWLVMAVCLTIYWGTPWIRWDRGPYAPDQAVLIDLANRRFFMF DIEIWPHEFYFVAGLLIMAGIGLFLVTSAVGRAWCGYACPQTVWTDLFQHVDRFVDGDRNAQLRLQKAPWGPQKIAKRLF KWGIYLAISFLTGGAWIFYFADAPTLQHDFWTGNAAPVAYATTFVLTMTTFVLGGFLREQVCIYMCPWPRIQTAMLDEKS LIVTYKDWRGEPRGSLKTAMKAATPLGDCIDCLQCVAVCPTGIDIREGPQVGCITCALCIDACDKAMADVGRPRGLIDYC TLDDAEKEKQGQPATPLLKTILRPRTLVYLGVWSSIGLAMLFMLGQRARLDLSVAKDRNPEYVMLSDGAIRNAYTLKLRN MEERPRTFRIALDGLQGGAIFTDEMDAAEAGRQIEVDVPADTTQRLRVYALRPRGSEPAEFAFVMTATDRDGGTDRSETT FTTAQGNGQ
Sequences:
>Translated_489_residues MHAHDPKLSANTSSETVLYEKRKSVFPKAVNGPFRRFKWLVMAVCLTIYWGTPWIRWDRGPYAPDQAVLIDLANRRFFMF DIEIWPHEFYFVAGLLIMAGIGLFLVTSAVGRAWCGYACPQTVWTDLFQHVDRFVDGDRNAQLRLQKAPWGPQKIAKRLF KWGIYLAISFLTGGAWIFYFADAPTLQHDFWTGNAAPVAYATTFVLTMTTFVLGGFLREQVCIYMCPWPRIQTAMLDEKS LIVTYKDWRGEPRGSLKTAMKAATPLGDCIDCLQCVAVCPTGIDIREGPQVGCITCALCIDACDKAMADVGRPRGLIDYC TLDDAEKEKQGQPATPLLKTILRPRTLVYLGVWSSIGLAMLFMLGQRARLDLSVAKDRNPEYVMLSDGAIRNAYTLKLRN MEERPRTFRIALDGLQGGAIFTDEMDAAEAGRQIEVDVPADTTQRLRVYALRPRGSEPAEFAFVMTATDRDGGTDRSETT FTTAQGNGQ >Mature_489_residues MHAHDPKLSANTSSETVLYEKRKSVFPKAVNGPFRRFKWLVMAVCLTIYWGTPWIRWDRGPYAPDQAVLIDLANRRFFMF DIEIWPHEFYFVAGLLIMAGIGLFLVTSAVGRAWCGYACPQTVWTDLFQHVDRFVDGDRNAQLRLQKAPWGPQKIAKRLF KWGIYLAISFLTGGAWIFYFADAPTLQHDFWTGNAAPVAYATTFVLTMTTFVLGGFLREQVCIYMCPWPRIQTAMLDEKS LIVTYKDWRGEPRGSLKTAMKAATPLGDCIDCLQCVAVCPTGIDIREGPQVGCITCALCIDACDKAMADVGRPRGLIDYC TLDDAEKEKQGQPATPLLKTILRPRTLVYLGVWSSIGLAMLFMLGQRARLDLSVAKDRNPEYVMLSDGAIRNAYTLKLRN MEERPRTFRIALDGLQGGAIFTDEMDAAEAGRQIEVDVPADTTQRLRVYALRPRGSEPAEFAFVMTATDRDGGTDRSETT FTTAQGNGQ
Specific function: FixG is predicted to be involved in a redox process. The four proteins fixG, fixH, fixI, and fixS may participate in a membrane-bound complex coupling the fixI cation pump with a redox process catalyzed by fixG [H]
COG id: COG0348
COG function: function code C; Polyferredoxin
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Contains 1 4Fe-4S ferredoxin-type domain [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR017896 - InterPro: IPR017900 - InterPro: IPR014116 - InterPro: IPR012285 - InterPro: IPR013783 [H]
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 54834; Mature: 54834
Theoretical pI: Translated: 7.92; Mature: 7.92
Prosite motif: PS00198 4FE4S_FERREDOXIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.9 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 5.9 %Cys+Met (Translated Protein) 2.9 %Cys (Mature Protein) 3.1 %Met (Mature Protein) 5.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MHAHDPKLSANTSSETVLYEKRKSVFPKAVNGPFRRFKWLVMAVCLTIYWGTPWIRWDRG CCCCCCCCCCCCCCCEEEEHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHCCCCEEEECCC PYAPDQAVLIDLANRRFFMFDIEIWPHEFYFVAGLLIMAGIGLFLVTSAVGRAWCGYACP CCCCCCEEEEEECCCEEEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCH QTVWTDLFQHVDRFVDGDRNAQLRLQKAPWGPQKIAKRLFKWGIYLAISFLTGGAWIFYF HHHHHHHHHHHHHHHCCCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHCCCEEEEEE ADAPTLQHDFWTGNAAPVAYATTFVLTMTTFVLGGFLREQVCIYMCPWPRIQTAMLDEKS ECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCEEEEECCCCCHHHHHCCCCE LIVTYKDWRGEPRGSLKTAMKAATPLGDCIDCLQCVAVCPTGIDIREGPQVGCITCALCI EEEEECCCCCCCCCHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHH DACDKAMADVGRPRGLIDYCTLDDAEKEKQGQPATPLLKTILRPRTLVYLGVWSSIGLAM HHHHHHHHHCCCCCCCEEEECCCCHHHHHCCCCCCHHHHHHHCCCEEEEEECHHHHHHHH LFMLGQRARLDLSVAKDRNPEYVMLSDGAIRNAYTLKLRNMEERPRTFRIALDGLQGGAI HHHHCCCCCEEEEEECCCCCCEEEECCCCCCCEEEEEECCCCCCCCEEEEEEECCCCCEE FTDEMDAAEAGRQIEVDVPADTTQRLRVYALRPRGSEPAEFAFVMTATDRDGGTDRSETT EECCCCHHHCCCEEEEECCCCCCCCEEEEEECCCCCCCCEEEEEEEEECCCCCCCCCCCE FTTAQGNGQ EEECCCCCC >Mature Secondary Structure MHAHDPKLSANTSSETVLYEKRKSVFPKAVNGPFRRFKWLVMAVCLTIYWGTPWIRWDRG CCCCCCCCCCCCCCCEEEEHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHCCCCEEEECCC PYAPDQAVLIDLANRRFFMFDIEIWPHEFYFVAGLLIMAGIGLFLVTSAVGRAWCGYACP CCCCCCEEEEEECCCEEEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCH QTVWTDLFQHVDRFVDGDRNAQLRLQKAPWGPQKIAKRLFKWGIYLAISFLTGGAWIFYF HHHHHHHHHHHHHHHCCCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHCCCEEEEEE ADAPTLQHDFWTGNAAPVAYATTFVLTMTTFVLGGFLREQVCIYMCPWPRIQTAMLDEKS ECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCEEEEECCCCCHHHHHCCCCE LIVTYKDWRGEPRGSLKTAMKAATPLGDCIDCLQCVAVCPTGIDIREGPQVGCITCALCI EEEEECCCCCCCCCHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHH DACDKAMADVGRPRGLIDYCTLDDAEKEKQGQPATPLLKTILRPRTLVYLGVWSSIGLAM HHHHHHHHHCCCCCCCEEEECCCCHHHHHCCCCCCHHHHHHHCCCEEEEEECHHHHHHHH LFMLGQRARLDLSVAKDRNPEYVMLSDGAIRNAYTLKLRNMEERPRTFRIALDGLQGGAI HHHHCCCCCEEEEEECCCCCCEEEECCCCCCCEEEEEECCCCCCCCEEEEEEECCCCCEE FTDEMDAAEAGRQIEVDVPADTTQRLRVYALRPRGSEPAEFAFVMTATDRDGGTDRSETT EECCCCHHHCCCEEEEECCCCCCCCEEEEEECCCCCCCCEEEEEEEEECCCCCCCCCCCE FTTAQGNGQ EEECCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 2536685; 11481432 [H]