| Definition | Novosphingobium aromaticivorans DSM 12444 chromosome, complete genome. |
|---|---|
| Accession | NC_007794 |
| Length | 3,561,584 |
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The map label for this gene is 87200583
Identifier: 87200583
GI number: 87200583
Start: 2774890
End: 2775138
Strand: Reverse
Name: 87200583
Synonym: Saro_2570
Alternate gene names: NA
Gene position: 2775138-2774890 (Counterclockwise)
Preceding gene: 87200584
Following gene: 87200582
Centisome position: 77.92
GC content: 65.86
Gene sequence:
>249_bases ATGAGCCGCCTGCTCAAGCTGCTGGCCCCGCTGGCCGTCTTGCAGATGGCGATGCCCGCGCCGGCCCAGGCTTCATACAT CATGGTCGCCGCGTGCGGCGGTGCGGGGGGCATGGTGCCGATCCGCGTGCCCGGCCGGGACGACGGCGGCAAAAATCTAC CCTGTTGTAAAATTTGCCATATCTCAATGCGCAAGCGCCTCGCCGCCGATAGCTGTTGCGACGAGGAGGACGACCCGGAT GTCGCCTGA
Upstream 100 bases:
>100_bases TGTTCGGACTGGCCTCCTTCTTCTGGGCTCTCAAGCGCGGGCAGTTCAGCGATCTCGACGGCGCCGCCGCGCGCATCCTG ATCGAAGAGGATGAAGAGGC
Downstream 100 bases:
>100_bases TCTGATGATACGCCCTGAAACCGTTGCCGACTGGACCTATTACCCCGAACTGCTCGAACGCCCGGTCCCACGCTACACCA GCTATCCGACCGCGGCAGAG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 82; Mature: 81
Protein sequence:
>82_residues MSRLLKLLAPLAVLQMAMPAPAQASYIMVAACGGAGGMVPIRVPGRDDGGKNLPCCKICHISMRKRLAADSCCDEEDDPD VA
Sequences:
>Translated_82_residues MSRLLKLLAPLAVLQMAMPAPAQASYIMVAACGGAGGMVPIRVPGRDDGGKNLPCCKICHISMRKRLAADSCCDEEDDPD VA >Mature_81_residues SRLLKLLAPLAVLQMAMPAPAQASYIMVAACGGAGGMVPIRVPGRDDGGKNLPCCKICHISMRKRLAADSCCDEEDDPDV A
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 8586; Mature: 8455
Theoretical pI: Translated: 7.04; Mature: 7.04
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
7.3 %Cys (Translated Protein) 7.3 %Met (Translated Protein) 14.6 %Cys+Met (Translated Protein) 7.4 %Cys (Mature Protein) 6.2 %Met (Mature Protein) 13.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSRLLKLLAPLAVLQMAMPAPAQASYIMVAACGGAGGMVPIRVPGRDDGGKNLPCCKICH CHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEECCCCCEEEEEECCCCCCCCCCCHHHHHH ISMRKRLAADSCCDEEDDPDVA HHHHHHHHHCCCCCCCCCCCCC >Mature Secondary Structure SRLLKLLAPLAVLQMAMPAPAQASYIMVAACGGAGGMVPIRVPGRDDGGKNLPCCKICH HHHHHHHHHHHHHHHHCCCCCCCCEEEEEEECCCCCEEEEEECCCCCCCCCCCHHHHHH ISMRKRLAADSCCDEEDDPDVA HHHHHHHHHCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA