| Definition | Novosphingobium aromaticivorans DSM 12444 chromosome, complete genome. |
|---|---|
| Accession | NC_007794 |
| Length | 3,561,584 |
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The map label for this gene is 87200584
Identifier: 87200584
GI number: 87200584
Start: 2775135
End: 2775284
Strand: Reverse
Name: 87200584
Synonym: Saro_2571
Alternate gene names: NA
Gene position: 2775284-2775135 (Counterclockwise)
Preceding gene: 87200585
Following gene: 87200583
Centisome position: 77.92
GC content: 62.67
Gene sequence:
>150_bases ATGAACGGCATCGCCTTCATGCTCCCGATCGCCCTTGGCATGGGCCTGTTCGGACTGGCCTCCTTCTTCTGGGCTCTCAA GCGCGGGCAGTTCAGCGATCTCGACGGCGCCGCCGCGCGCATCCTGATCGAAGAGGATGAAGAGGCATGA
Upstream 100 bases:
>100_bases CGATCCTTGGCCACGTTACCCCGCTCATCGCTGCCATCGCCATGTCGACCAGCTCGCTTGTCGTCGTGGCCAATTCGCTG CGTCTTGCCGGAGAAGCGAA
Downstream 100 bases:
>100_bases GCCGCCTGCTCAAGCTGCTGGCCCCGCTGGCCGTCTTGCAGATGGCGATGCCCGCGCCGGCCCAGGCTTCATACATCATG GTCGCCGCGTGCGGCGGTGC
Product: cytochrome oxidase maturation protein, cbb3-type
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 49; Mature: 49
Protein sequence:
>49_residues MNGIAFMLPIALGMGLFGLASFFWALKRGQFSDLDGAAARILIEEDEEA
Sequences:
>Translated_49_residues MNGIAFMLPIALGMGLFGLASFFWALKRGQFSDLDGAAARILIEEDEEA >Mature_49_residues MNGIAFMLPIALGMGLFGLASFFWALKRGQFSDLDGAAARILIEEDEEA
Specific function: Unknown
COG id: COG3197
COG function: function code P; Uncharacterized protein, possibly involved in nitrogen fixation
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 5305; Mature: 5305
Theoretical pI: Translated: 3.96; Mature: 3.96
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 6.1 %Met (Translated Protein) 6.1 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 6.1 %Met (Mature Protein) 6.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNGIAFMLPIALGMGLFGLASFFWALKRGQFSDLDGAAARILIEEDEEA CCCHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCCCCCCEEEEEECCCCC >Mature Secondary Structure MNGIAFMLPIALGMGLFGLASFFWALKRGQFSDLDGAAARILIEEDEEA CCCHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCCCCCCEEEEEECCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA