| Definition | Novosphingobium aromaticivorans DSM 12444 chromosome, complete genome. |
|---|---|
| Accession | NC_007794 |
| Length | 3,561,584 |
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The map label for this gene is cysH [H]
Identifier: 87200573
GI number: 87200573
Start: 2762385
End: 2763197
Strand: Direct
Name: cysH [H]
Synonym: Saro_2560
Alternate gene names: 87200573
Gene position: 2762385-2763197 (Clockwise)
Preceding gene: 87200572
Following gene: 87200574
Centisome position: 77.56
GC content: 65.44
Gene sequence:
>813_bases ATGGACAGCACCGTGACCCGCAAGATCGACCTGCTCGACACCGCGCCGCGCTTTACCGAGACGGACGCGATCCGCCTCAA CAACCTGTTCCGGGGCACCGACACGCACGACATGCTGCGTTCGGTGATCCGCGACGGGCTGGCGGGCGACCTCGCGGTCG TGTCGAGCTTCGGCGCGGAAAGCGCGGTGCTGCTCCACCTGATCGCCGAAGTCGACCCTTCGGTGCCGGTCCTGTTTCTC GAAACGGGCAAGCATTTCCGCGAGACCGTTGCCTATCGCGACGAGTTGATCGGCTTCCTGGGCATGACCAACCTGCAGAT CATCGAACCCGACGCGGCGGTCATCGCCAAGAAGGACGAGAACGGGCTGCGCTGGTCCTGGGACCCGGATGGCTGCTGCG AGATCCGCAAGGTCGAGCCGCTGGCCAGGGCCCTGCTCCACTTCGATGCATCGATCACCGGCCGCAAGGGCTTCCAGTCG AAGACCCGCGCAGGGCTTCCACGGTTCGAGATCGACCGTTCGGACGCGCAAGGACGGTTGAAGATCAACCCGCTCGCGTC ATGGGACAAGACCATGCTCGAGGCCTATTTCGCAGAGCATGGCTTGCCGCCGCATCCGCTGGTCGCGCAGGGCTATCCCT CGATCGGCTGCGCGCCCTGCACCAGCAAGGTTGCCCCCGGTGAAGACCCGCGCTCGGGCCGCTGGAAGGGCTGGGACAAG ACCGAATGCGGCATCCATTCGCCCACCGACGACGAAGCCGCAGGCAAGAAGCCTGGCGACGAACTGCCCCCAGGATACGA ACCGGTCTTCTGA
Upstream 100 bases:
>100_bases TCGCGACCAGGCCGGAGGTCTACCAGAAGACCGTCGACGGGCGCCCGGCCATCTGGGCGAAGCGTCACCCGGCCTGAGCC GGGATCGAGGAACGAAGCCA
Downstream 100 bases:
>100_bases GGCAGCGCCCTGCCGCAGACGCGCGGTGGGGCAAGACGGCTGCAAGAAGGGCATCCGCTCGCGCTTTCCCGCCCATCCTG GCTCTGCTAGGCCCCCTCCC
Product: phosphoadenosine phosphosulfate reductase
Products: NA
Alternate protein names: 3'-phosphoadenylylsulfate reductase; PAPS reductase, thioredoxin dependent; PAPS sulfotransferase; PAdoPS reductase [H]
Number of amino acids: Translated: 270; Mature: 270
Protein sequence:
>270_residues MDSTVTRKIDLLDTAPRFTETDAIRLNNLFRGTDTHDMLRSVIRDGLAGDLAVVSSFGAESAVLLHLIAEVDPSVPVLFL ETGKHFRETVAYRDELIGFLGMTNLQIIEPDAAVIAKKDENGLRWSWDPDGCCEIRKVEPLARALLHFDASITGRKGFQS KTRAGLPRFEIDRSDAQGRLKINPLASWDKTMLEAYFAEHGLPPHPLVAQGYPSIGCAPCTSKVAPGEDPRSGRWKGWDK TECGIHSPTDDEAAGKKPGDELPPGYEPVF
Sequences:
>Translated_270_residues MDSTVTRKIDLLDTAPRFTETDAIRLNNLFRGTDTHDMLRSVIRDGLAGDLAVVSSFGAESAVLLHLIAEVDPSVPVLFL ETGKHFRETVAYRDELIGFLGMTNLQIIEPDAAVIAKKDENGLRWSWDPDGCCEIRKVEPLARALLHFDASITGRKGFQS KTRAGLPRFEIDRSDAQGRLKINPLASWDKTMLEAYFAEHGLPPHPLVAQGYPSIGCAPCTSKVAPGEDPRSGRWKGWDK TECGIHSPTDDEAAGKKPGDELPPGYEPVF >Mature_270_residues MDSTVTRKIDLLDTAPRFTETDAIRLNNLFRGTDTHDMLRSVIRDGLAGDLAVVSSFGAESAVLLHLIAEVDPSVPVLFL ETGKHFRETVAYRDELIGFLGMTNLQIIEPDAAVIAKKDENGLRWSWDPDGCCEIRKVEPLARALLHFDASITGRKGFQS KTRAGLPRFEIDRSDAQGRLKINPLASWDKTMLEAYFAEHGLPPHPLVAQGYPSIGCAPCTSKVAPGEDPRSGRWKGWDK TECGIHSPTDDEAAGKKPGDELPPGYEPVF
Specific function: Reduction of activated sulfate into sulfite [H]
COG id: COG0175
COG function: function code EH; 3'-phosphoadenosine 5'-phosphosulfate sulfotransferase (PAPS reductase)/FAD synthetase and related enzymes
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the PAPS reductase family. CysH subfamily [H]
Homologues:
Organism=Escherichia coli, GI1789121, Length=207, Percent_Identity=35.7487922705314, Blast_Score=117, Evalue=8e-28, Organism=Saccharomyces cerevisiae, GI6325425, Length=211, Percent_Identity=34.5971563981043, Blast_Score=105, Evalue=1e-23,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004511 - InterPro: IPR002500 - InterPro: IPR014729 [H]
Pfam domain/function: PF01507 PAPS_reduct [H]
EC number: =1.8.4.8 [H]
Molecular weight: Translated: 29680; Mature: 29680
Theoretical pI: Translated: 5.22; Mature: 5.22
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.9 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 1.9 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDSTVTRKIDLLDTAPRFTETDAIRLNNLFRGTDTHDMLRSVIRDGLAGDLAVVSSFGAE CCCCHHEEEEHHCCCCCCCCCCHHHEHHHHCCCCHHHHHHHHHHCCCCCHHHHHHHCCCH SAVLLHLIAEVDPSVPVLFLETGKHFRETVAYRDELIGFLGMTNLQIIEPDAAVIAKKDE HHHHHHHHHHCCCCCCEEEECCCHHHHHHHHHHHHHHHHHCCCCEEEECCCCEEEEECCC NGLRWSWDPDGCCEIRKVEPLARALLHFDASITGRKGFQSKTRAGLPRFEIDRSDAQGRL CCCEECCCCCCCEEHHHHHHHHHHHHHHCCCCCCCCCCCHHHHCCCCCEEECCCCCCCEE KINPLASWDKTMLEAYFAEHGLPPHPLVAQGYPSIGCAPCTSKVAPGEDPRSGRWKGWDK EECCCCHHHHHHHHHHHHHCCCCCCCCHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC TECGIHSPTDDEAAGKKPGDELPPGYEPVF CCCCCCCCCCCHHCCCCCCCCCCCCCCCCC >Mature Secondary Structure MDSTVTRKIDLLDTAPRFTETDAIRLNNLFRGTDTHDMLRSVIRDGLAGDLAVVSSFGAE CCCCHHEEEEHHCCCCCCCCCCHHHEHHHHCCCCHHHHHHHHHHCCCCCHHHHHHHCCCH SAVLLHLIAEVDPSVPVLFLETGKHFRETVAYRDELIGFLGMTNLQIIEPDAAVIAKKDE HHHHHHHHHHCCCCCCEEEECCCHHHHHHHHHHHHHHHHHCCCCEEEECCCCEEEEECCC NGLRWSWDPDGCCEIRKVEPLARALLHFDASITGRKGFQSKTRAGLPRFEIDRSDAQGRL CCCEECCCCCCCEEHHHHHHHHHHHHHHCCCCCCCCCCCHHHHCCCCCEEECCCCCCCEE KINPLASWDKTMLEAYFAEHGLPPHPLVAQGYPSIGCAPCTSKVAPGEDPRSGRWKGWDK EECCCCHHHHHHHHHHHHHCCCCCCCCHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC TECGIHSPTDDEAAGKKPGDELPPGYEPVF CCCCCCCCCCCHHCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 11214968 [H]