Definition Novosphingobium aromaticivorans DSM 12444 chromosome, complete genome.
Accession NC_007794
Length 3,561,584

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The map label for this gene is 87200572

Identifier: 87200572

GI number: 87200572

Start: 2761930

End: 2762361

Strand: Direct

Name: 87200572

Synonym: Saro_2559

Alternate gene names: NA

Gene position: 2761930-2762361 (Clockwise)

Preceding gene: 87200571

Following gene: 87200573

Centisome position: 77.55

GC content: 68.29

Gene sequence:

>432_bases
ATGGTTGAGCAGAACCTGCGTTTCCGGGGCGATGAACCGGTGGCCGATCCGGCCGTGACCGTCGACGCCTTTGCCGAGCA
GACCAACGCGACCGCCGTACGGATCGAGCCGGGCGACGATGCCCGCGAACTGCTGCCGCATCTTGACCGGCTGAGCCTCG
TGGAAGTGAACTTCCCGGCTTATACCGACGGACGCGGCTATTCGGCGGCGCGCATCCTGCGCGAGCATGGCTATGCCGGC
GAACTGCGGGCGGTGGGCGACGTGCTGGTCGACCAGCTTTCGCACATGCGCCGCTGCGGCTTCGACAGCTTCGCGCCCGA
CCAGCCGATCAGCCAGGAAGCCGCCGAGAAGGCCTTCGCGACCAGGCCGGAGGTCTACCAGAAGACCGTCGACGGGCGCC
CGGCCATCTGGGCGAAGCGTCACCCGGCCTGA

Upstream 100 bases:

>100_bases
GAAAAGGCCACTGACGTCTATCTCGCCCAGCGCGCCGAAGGGGAACGCTTCGTCGACACCTATCGCCGCATCGGCATGGC
CCCGTTCAAGGAGGCAATCT

Downstream 100 bases:

>100_bases
GCCGGGATCGAGGAACGAAGCCAATGGACAGCACCGTGACCCGCAAGATCGACCTGCTCGACACCGCGCCGCGCTTTACC
GAGACGGACGCGATCCGCCT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 143; Mature: 143

Protein sequence:

>143_residues
MVEQNLRFRGDEPVADPAVTVDAFAEQTNATAVRIEPGDDARELLPHLDRLSLVEVNFPAYTDGRGYSAARILREHGYAG
ELRAVGDVLVDQLSHMRRCGFDSFAPDQPISQEAAEKAFATRPEVYQKTVDGRPAIWAKRHPA

Sequences:

>Translated_143_residues
MVEQNLRFRGDEPVADPAVTVDAFAEQTNATAVRIEPGDDARELLPHLDRLSLVEVNFPAYTDGRGYSAARILREHGYAG
ELRAVGDVLVDQLSHMRRCGFDSFAPDQPISQEAAEKAFATRPEVYQKTVDGRPAIWAKRHPA
>Mature_143_residues
MVEQNLRFRGDEPVADPAVTVDAFAEQTNATAVRIEPGDDARELLPHLDRLSLVEVNFPAYTDGRGYSAARILREHGYAG
ELRAVGDVLVDQLSHMRRCGFDSFAPDQPISQEAAEKAFATRPEVYQKTVDGRPAIWAKRHPA

Specific function: Unknown

COG id: COG3749

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 15860; Mature: 15860

Theoretical pI: Translated: 5.01; Mature: 5.01

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVEQNLRFRGDEPVADPAVTVDAFAEQTNATAVRIEPGDDARELLPHLDRLSLVEVNFPA
CCCCCCCCCCCCCCCCCCHHHHHHHHCCCCEEEEECCCCCHHHHHHHCCCCEEEEECCCC
YTDGRGYSAARILREHGYAGELRAVGDVLVDQLSHMRRCGFDSFAPDQPISQEAAEKAFA
CCCCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHC
TRPEVYQKTVDGRPAIWAKRHPA
CCHHHHHHHCCCCCCCCCCCCCC
>Mature Secondary Structure
MVEQNLRFRGDEPVADPAVTVDAFAEQTNATAVRIEPGDDARELLPHLDRLSLVEVNFPA
CCCCCCCCCCCCCCCCCCHHHHHHHHCCCCEEEEECCCCCHHHHHHHCCCCEEEEECCCC
YTDGRGYSAARILREHGYAGELRAVGDVLVDQLSHMRRCGFDSFAPDQPISQEAAEKAFA
CCCCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHC
TRPEVYQKTVDGRPAIWAKRHPA
CCHHHHHHHCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA