| Definition | Novosphingobium aromaticivorans DSM 12444 chromosome, complete genome. |
|---|---|
| Accession | NC_007794 |
| Length | 3,561,584 |
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The map label for this gene is 87200536
Identifier: 87200536
GI number: 87200536
Start: 2724740
End: 2725330
Strand: Reverse
Name: 87200536
Synonym: Saro_2523
Alternate gene names: NA
Gene position: 2725330-2724740 (Counterclockwise)
Preceding gene: 87200537
Following gene: 87200535
Centisome position: 76.52
GC content: 66.84
Gene sequence:
>591_bases ATGAAGACATTCTCCAGGGCCCTGGTCGGGACTGCCGCCGCCGCTGCGGTCGCAGTGTCTTCGGCCAGCCCGGCAGTCGC CCGCGACCATCGCGGTGGCATCGACGGAGGCGACATCATTGCTGGCGCTCTCGTGATCGGTGGCATCGCCGCCATTGCGG CCGCAGCCAGCAAGGATAACGATCGCTATGACCGCTATGGCTACGGCGATGACTGGCGTGGCCGTGACGGTTGGAACGAT GGGCGTTACCGCGACGGCTATAGTGGCCGGGGCAACCCGCGCGGCGCCATCGAACAGTGTGTCCGCACGGCCGAGCGCAC CGCTTCGCGCAACAGCTATGGCCGGGCCGACGTCACCGACGTTCGCGATGTGAAGCCGACCCGCTGGGGCTACGAAGTGA AGGGCCGCATCGCCGTGAACGGCATGGGCCGCGACTGGCGCGACGGCGACCGCAACTACGGCCGTGGCTGGGGCGGCGAC TATCGCGGCTGGAACAACTCGATGCGCGGCTACGATAGCGGATCGTTCAAGTGCAAGGTCGAGCGCGGCCGGGTGGTCGA TATCGACTTCAGCGGCATTCGTGGTCTTTGA
Upstream 100 bases:
>100_bases ACAACTCCTGTCATGCCGGTTCAGCGTCGTCTCACGGCGAATCAGGCATTCCTTCATGCGTGGCGGGAACTGCCCGCCGA TACGAATGAAGGATCGAACC
Downstream 100 bases:
>100_bases CCATAACGGCTGGTCGCAAAACGGCGGGCGGTTCAGGCATCGGAAAGCCTGGGCCGCCTAGCCCTTTTTCATTGTGACGG ACCGTCGGCGGCCCGCCTCT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 196; Mature: 196
Protein sequence:
>196_residues MKTFSRALVGTAAAAAVAVSSASPAVARDHRGGIDGGDIIAGALVIGGIAAIAAAASKDNDRYDRYGYGDDWRGRDGWND GRYRDGYSGRGNPRGAIEQCVRTAERTASRNSYGRADVTDVRDVKPTRWGYEVKGRIAVNGMGRDWRDGDRNYGRGWGGD YRGWNNSMRGYDSGSFKCKVERGRVVDIDFSGIRGL
Sequences:
>Translated_196_residues MKTFSRALVGTAAAAAVAVSSASPAVARDHRGGIDGGDIIAGALVIGGIAAIAAAASKDNDRYDRYGYGDDWRGRDGWND GRYRDGYSGRGNPRGAIEQCVRTAERTASRNSYGRADVTDVRDVKPTRWGYEVKGRIAVNGMGRDWRDGDRNYGRGWGGD YRGWNNSMRGYDSGSFKCKVERGRVVDIDFSGIRGL >Mature_196_residues MKTFSRALVGTAAAAAVAVSSASPAVARDHRGGIDGGDIIAGALVIGGIAAIAAAASKDNDRYDRYGYGDDWRGRDGWND GRYRDGYSGRGNPRGAIEQCVRTAERTASRNSYGRADVTDVRDVKPTRWGYEVKGRIAVNGMGRDWRDGDRNYGRGWGGD YRGWNNSMRGYDSGSFKCKVERGRVVDIDFSGIRGL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 21226; Mature: 21226
Theoretical pI: Translated: 9.97; Mature: 9.97
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKTFSRALVGTAAAAAVAVSSASPAVARDHRGGIDGGDIIAGALVIGGIAAIAAAASKDN CCHHHHHHHHHHHHHHHHHCCCCCCHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCC DRYDRYGYGDDWRGRDGWNDGRYRDGYSGRGNPRGAIEQCVRTAERTASRNSYGRADVTD CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCC VRDVKPTRWGYEVKGRIAVNGMGRDWRDGDRNYGRGWGGDYRGWNNSMRGYDSGSFKCKV CCCCCCCCCCEEEEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEE ERGRVVDIDFSGIRGL ECCEEEEEECCCCCCC >Mature Secondary Structure MKTFSRALVGTAAAAAVAVSSASPAVARDHRGGIDGGDIIAGALVIGGIAAIAAAASKDN CCHHHHHHHHHHHHHHHHHCCCCCCHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCC DRYDRYGYGDDWRGRDGWNDGRYRDGYSGRGNPRGAIEQCVRTAERTASRNSYGRADVTD CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCC VRDVKPTRWGYEVKGRIAVNGMGRDWRDGDRNYGRGWGGDYRGWNNSMRGYDSGSFKCKV CCCCCCCCCCEEEEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEE ERGRVVDIDFSGIRGL ECCEEEEEECCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA