| Definition | Novosphingobium aromaticivorans DSM 12444 chromosome, complete genome. |
|---|---|
| Accession | NC_007794 |
| Length | 3,561,584 |
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The map label for this gene is 87200535
Identifier: 87200535
GI number: 87200535
Start: 2724014
End: 2724580
Strand: Reverse
Name: 87200535
Synonym: Saro_2522
Alternate gene names: NA
Gene position: 2724580-2724014 (Counterclockwise)
Preceding gene: 87200536
Following gene: 87200534
Centisome position: 76.5
GC content: 67.2
Gene sequence:
>567_bases ATGACCGGCAGGTTTTCGAAGATCGCGCTCGCAATTGCCGGCATGACCACCGCCATGCTGCCGCTTGCCGCCGAAGCACA GGCACGCCCGCACTGGGGCCGTGGTGGCGGCTGGGGCGGCGACTGGGGTGGCAGGCACTGGCATCGCGACCGGGGCGGCG TGGACGGTGGCGACGTACTTGCCGGCCTGCTCATCATCGGCGGCATCGCGGCAATCGCCACGGCGGCCAGCAATGCCGAA AAGAAGCGCGATGGCCGGAAGGACGACGACTACAACTATCGCCCCGACCGTAACGGAGACGACTGGCGCGGCAACGGCAG CGACAACCGGGACAGCGACAACCGGGACAGCGACTGGAACAGCGGCGCAAGTCGGGGCATCGACGATGCGGTGAACCGCT GCGTGGAGGAGGCTTCGCGCCGGGGCGAGGTTGACGAGGTCTACGACGCGGCCCGCAGCGGTGAAGGATACCGCGTTTCG GGCACGCTGAAGGGCGGCGACGATTTCGATTGCCAGGTTCGCGGCAATGGCACTGTTGACGTGGACGTACGCGATCGGAA CTTCTGA
Upstream 100 bases:
>100_bases AGCCCTTTTTCATTGTGACGGACCGTCGGCGGCCCGCCTCTCGGACCGGCATGGCCGGACCCGAATTGGCGAACCGCGCG ACGAGGGAGGGATTTGGGCC
Downstream 100 bases:
>100_bases ACGGCGCGCTGGCGGTTCGCTGCTGGCGCGCGTTTATTTCTCTCCTCCCTTGCGGCGGCGGCGCGGCCTGATTATCGGCA GAAGAAACCTTCTAACGAGG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 188; Mature: 187
Protein sequence:
>188_residues MTGRFSKIALAIAGMTTAMLPLAAEAQARPHWGRGGGWGGDWGGRHWHRDRGGVDGGDVLAGLLIIGGIAAIATAASNAE KKRDGRKDDDYNYRPDRNGDDWRGNGSDNRDSDNRDSDWNSGASRGIDDAVNRCVEEASRRGEVDEVYDAARSGEGYRVS GTLKGGDDFDCQVRGNGTVDVDVRDRNF
Sequences:
>Translated_188_residues MTGRFSKIALAIAGMTTAMLPLAAEAQARPHWGRGGGWGGDWGGRHWHRDRGGVDGGDVLAGLLIIGGIAAIATAASNAE KKRDGRKDDDYNYRPDRNGDDWRGNGSDNRDSDNRDSDWNSGASRGIDDAVNRCVEEASRRGEVDEVYDAARSGEGYRVS GTLKGGDDFDCQVRGNGTVDVDVRDRNF >Mature_187_residues TGRFSKIALAIAGMTTAMLPLAAEAQARPHWGRGGGWGGDWGGRHWHRDRGGVDGGDVLAGLLIIGGIAAIATAASNAEK KRDGRKDDDYNYRPDRNGDDWRGNGSDNRDSDNRDSDWNSGASRGIDDAVNRCVEEASRRGEVDEVYDAARSGEGYRVSG TLKGGDDFDCQVRGNGTVDVDVRDRNF
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 20245; Mature: 20114
Theoretical pI: Translated: 4.94; Mature: 4.94
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTGRFSKIALAIAGMTTAMLPLAAEAQARPHWGRGGGWGGDWGGRHWHRDRGGVDGGDVL CCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHH AGLLIIGGIAAIATAASNAEKKRDGRKDDDYNYRPDRNGDDWRGNGSDNRDSDNRDSDWN HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC SGASRGIDDAVNRCVEEASRRGEVDEVYDAARSGEGYRVSGTLKGGDDFDCQVRGNGTVD CCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCEEEEEEECCCCCCEEEEECCCEEE VDVRDRNF EEECCCCC >Mature Secondary Structure TGRFSKIALAIAGMTTAMLPLAAEAQARPHWGRGGGWGGDWGGRHWHRDRGGVDGGDVL CCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHH AGLLIIGGIAAIATAASNAEKKRDGRKDDDYNYRPDRNGDDWRGNGSDNRDSDNRDSDWN HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC SGASRGIDDAVNRCVEEASRRGEVDEVYDAARSGEGYRVSGTLKGGDDFDCQVRGNGTVD CCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCEEEEEEECCCCCCEEEEECCCEEE VDVRDRNF EEECCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA