| Definition | Novosphingobium aromaticivorans DSM 12444 chromosome, complete genome. |
|---|---|
| Accession | NC_007794 |
| Length | 3,561,584 |
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The map label for this gene is 87200534
Identifier: 87200534
GI number: 87200534
Start: 2723578
End: 2723901
Strand: Reverse
Name: 87200534
Synonym: Saro_2521
Alternate gene names: NA
Gene position: 2723901-2723578 (Counterclockwise)
Preceding gene: 87200535
Following gene: 87200533
Centisome position: 76.48
GC content: 65.43
Gene sequence:
>324_bases ATGACCACTTTCGACGACCGCGAAAAGGCTTTCGAGGCGAAGTTCGCACGCGACGAGGAAATGCTGTTCCGCGTTCATGC GCGCCGTAACCGCCTGCTGGGCCAGTGGGCCGCCGAGCGCATGGGCCTGGATCCGGCCGAAACCGAGGCCTATGCCAAGT CGGTCGTGCAGGCCGATTTCGAGGAAGCCGGCGACGAGGACGTGATTCGCAAGCTGCTGGGCGACCTGGTTTCCGCAGGC GTCGAGACCGACGAGGCCGAGATCCGCACCGCGATGGAAGCCAAGTCCGTCGATGCGCGCCGCCAGCTGATGGGCGAAGC CTGA
Upstream 100 bases:
>100_bases CGGTTCGCTGCTGGCGCGCGTTTATTTCTCTCCTCCCTTGCGGCGGCGGCGCGGCCTGATTATCGGCAGAAGAAACCTTC TAACGAGGATTTGCTGGGCC
Downstream 100 bases:
>100_bases TGGCAATGCCCGCCGCCGAGATCGAGGCCATGATCCGCGCGGCCCTGCCGGACGCGGACGTTGAGATCACCGATCTTGCC GGCGACGGCGACCACTACGC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 107; Mature: 106
Protein sequence:
>107_residues MTTFDDREKAFEAKFARDEEMLFRVHARRNRLLGQWAAERMGLDPAETEAYAKSVVQADFEEAGDEDVIRKLLGDLVSAG VETDEAEIRTAMEAKSVDARRQLMGEA
Sequences:
>Translated_107_residues MTTFDDREKAFEAKFARDEEMLFRVHARRNRLLGQWAAERMGLDPAETEAYAKSVVQADFEEAGDEDVIRKLLGDLVSAG VETDEAEIRTAMEAKSVDARRQLMGEA >Mature_106_residues TTFDDREKAFEAKFARDEEMLFRVHARRNRLLGQWAAERMGLDPAETEAYAKSVVQADFEEAGDEDVIRKLLGDLVSAGV ETDEAEIRTAMEAKSVDARRQLMGEA
Specific function: Unknown
COG id: COG5467
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 12082; Mature: 11950
Theoretical pI: Translated: 4.36; Mature: 4.36
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 4.7 %Met (Translated Protein) 4.7 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.8 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTTFDDREKAFEAKFARDEEMLFRVHARRNRLLGQWAAERMGLDPAETEAYAKSVVQADF CCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHH EEAGDEDVIRKLLGDLVSAGVETDEAEIRTAMEAKSVDARRQLMGEA HHCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure TTFDDREKAFEAKFARDEEMLFRVHARRNRLLGQWAAERMGLDPAETEAYAKSVVQADF CCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHH EEAGDEDVIRKLLGDLVSAGVETDEAEIRTAMEAKSVDARRQLMGEA HHCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA