Definition Novosphingobium aromaticivorans DSM 12444 chromosome, complete genome.
Accession NC_007794
Length 3,561,584

Click here to switch to the map view.

The map label for this gene is 87200533

Identifier: 87200533

GI number: 87200533

Start: 2723345

End: 2723578

Strand: Reverse

Name: 87200533

Synonym: Saro_2520

Alternate gene names: NA

Gene position: 2723578-2723345 (Counterclockwise)

Preceding gene: 87200534

Following gene: 87200532

Centisome position: 76.47

GC content: 67.52

Gene sequence:

>234_bases
ATGGCAATGCCCGCCGCCGAGATCGAGGCCATGATCCGCGCGGCCCTGCCGGACGCGGACGTTGAGATCACCGATCTTGC
CGGCGACGGCGACCACTACGCTGCGCGCGTGGTTTCGGCTGCGTTCGCCGGCCTTTCGCGCGTGAAGCAGCACAAGCTGG
TCTATGACGCCCTCGGTGGGCGCATGGGCGGCGAGCTTCACGCCTTGCAACTGACGACCGCCGTTCCCAACTGA

Upstream 100 bases:

>100_bases
ACCTGGTTTCCGCAGGCGTCGAGACCGACGAGGCCGAGATCCGCACCGCGATGGAAGCCAAGTCCGTCGATGCGCGCCGC
CAGCTGATGGGCGAAGCCTG

Downstream 100 bases:

>100_bases
GAGCGGAAAGGAAACCCATTCCCCATGTCGAACACCACCGAAGAGCGCATTTCCGAGATCGTGAACGGCAACGACGTCGT
CCTGTTCATGAAGGGCACGC

Product: BolA-like protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 77; Mature: 76

Protein sequence:

>77_residues
MAMPAAEIEAMIRAALPDADVEITDLAGDGDHYAARVVSAAFAGLSRVKQHKLVYDALGGRMGGELHALQLTTAVPN

Sequences:

>Translated_77_residues
MAMPAAEIEAMIRAALPDADVEITDLAGDGDHYAARVVSAAFAGLSRVKQHKLVYDALGGRMGGELHALQLTTAVPN
>Mature_76_residues
AMPAAEIEAMIRAALPDADVEITDLAGDGDHYAARVVSAAFAGLSRVKQHKLVYDALGGRMGGELHALQLTTAVPN

Specific function: Unknown

COG id: COG0271

COG function: function code T; Stress-induced morphogen (activity unknown)

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002634 [H]

Pfam domain/function: PF01722 BolA [H]

EC number: NA

Molecular weight: Translated: 8031; Mature: 7900

Theoretical pI: Translated: 4.93; Mature: 4.93

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
5.2 %Met     (Translated Protein)
5.2 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.9 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAMPAAEIEAMIRAALPDADVEITDLAGDGDHYAARVVSAAFAGLSRVKQHKLVYDALGG
CCCCHHHHHHHHHHHCCCCCCEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
RMGGELHALQLTTAVPN
CCCCCEEEEEEEECCCC
>Mature Secondary Structure 
AMPAAEIEAMIRAALPDADVEITDLAGDGDHYAARVVSAAFAGLSRVKQHKLVYDALGG
CCCHHHHHHHHHHHCCCCCCEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
RMGGELHALQLTTAVPN
CCCCCEEEEEEEECCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9823893 [H]