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The map label for this gene is ygiC [H]

Identifier: 87200372

GI number: 87200372

Start: 2505703

End: 2506848

Strand: Direct

Name: ygiC [H]

Synonym: Saro_2359

Alternate gene names: 87200372

Gene position: 2505703-2506848 (Clockwise)

Preceding gene: 87200371

Following gene: 87200375

Centisome position: 70.35

GC content: 64.57

Gene sequence:

>1146_bases
GTGCAGCGCCTGACGCTTGAGCCCCGCCCCGGCTGGCAGGCGTCCGTCGCCGAACTGGGCCTGCTCTGGCATAGCGACGC
GGACGGTCCCTACTGGGACGAGAGCGCGGCATATGCGCTCTCGATGGAGCAGGTCGAAACGCTCGAGACGGCGACCGAAG
AAGTGCACCGGCTTTATCTTGAAGCCGGGGATGCGATCGTGCGCGACGACTTGCTCATGGCATCGTGCGGCATTCCAGGG
ACCTATCACCGCGCGGTCCGCGAGGCGTGGCAGCGGCGCGGCCCGGCGCTGGATTTCGGACGGTTCGATTTCGCCTGGGA
CGGCACCGGACAGCCACGGCTGCTGGAATACAACTGCGATACGCCGACATCGCTCCTCGAGGCATCGATCATCCAGTGGT
ACTGGAAGGAGGAGCGTTTTCCGGACCGCGACCAGTTCAACAGCCTGCACGAAAAGCTGCTGGCCCGATGGCAGGCGATC
TCGGGCGCCATGCCCGGGCGACGCGTGTGGTTCACCCACGTTGCCGACCACGCCCACGAAGACACGATGACGACCACCTA
TCTGCGCGATCTGGCGGAACAGGCCGGTCTGGAGACACGCGGGCTCCTGATCGAACAGATCGGGCTGGATGCCAATGGCC
ACGTCCTGGACCAGGACGATTACCGGATCACTGCCCTGTTCAAGCTCTATCCGTGGGAATGGCTGGCGGCGGAGGAATTC
GGCCAGGCGATCCTCCCGCGAATGGCCGAGACCATATGGCTGGAACCCGTCTGGAAGATGCTGTGGAGCAACAAGGCGGT
TCTCGCGGTCCTGTGGGACCTGTTTCCGGACCACCCCAACCTTTTACCGGCGTCGCTGATCCCGGGCGCGGTGGGGCCGG
ATTTCGTGGCGAAGCCGGTGCTCGCGCGCGAGGGTGCGAACATAGAAGTGGTTTCGCATGGCAAGATCCTCGCCAGATCG
CACGGAAGCTACGATGCAAGCCGCATGGTCTACCAGCAGCGCTATCCGCTCAAGGATTTCGGGCGCGGATATCCGGTACT
GGGAAGCTGGATCGTAGCGGGCGAGGCGGCCGGCCTGGGCATCCGCGAGGATGGCCTGATCACCGGCAACCGCGCCCGCT
TCGTGCCTCACATCATTCTGGACTGA

Upstream 100 bases:

>100_bases
GCAGGCGCCCGCTTCGGCGAACATGGTGCGCAGCAAGCCGGTGGCGAGGGGCGGCTTCGGGTCCAAGGGCAAGTTCTTCG
GCGGCAGTTGGTCCTGAACC

Downstream 100 bases:

>100_bases
GCGCTCAGTCGAGCGCCTCGGCAATCAGCTTGCGCGTGTTGGCAACGCCATAGAGCGCGATGAAGCTGCCCATCCGCGGC
CCCGCGCTGGAACCGAGCAG

Product: glutathionylspermidine synthase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 381; Mature: 381

Protein sequence:

>381_residues
MQRLTLEPRPGWQASVAELGLLWHSDADGPYWDESAAYALSMEQVETLETATEEVHRLYLEAGDAIVRDDLLMASCGIPG
TYHRAVREAWQRRGPALDFGRFDFAWDGTGQPRLLEYNCDTPTSLLEASIIQWYWKEERFPDRDQFNSLHEKLLARWQAI
SGAMPGRRVWFTHVADHAHEDTMTTTYLRDLAEQAGLETRGLLIEQIGLDANGHVLDQDDYRITALFKLYPWEWLAAEEF
GQAILPRMAETIWLEPVWKMLWSNKAVLAVLWDLFPDHPNLLPASLIPGAVGPDFVAKPVLAREGANIEVVSHGKILARS
HGSYDASRMVYQQRYPLKDFGRGYPVLGSWIVAGEAAGLGIREDGLITGNRARFVPHIILD

Sequences:

>Translated_381_residues
MQRLTLEPRPGWQASVAELGLLWHSDADGPYWDESAAYALSMEQVETLETATEEVHRLYLEAGDAIVRDDLLMASCGIPG
TYHRAVREAWQRRGPALDFGRFDFAWDGTGQPRLLEYNCDTPTSLLEASIIQWYWKEERFPDRDQFNSLHEKLLARWQAI
SGAMPGRRVWFTHVADHAHEDTMTTTYLRDLAEQAGLETRGLLIEQIGLDANGHVLDQDDYRITALFKLYPWEWLAAEEF
GQAILPRMAETIWLEPVWKMLWSNKAVLAVLWDLFPDHPNLLPASLIPGAVGPDFVAKPVLAREGANIEVVSHGKILARS
HGSYDASRMVYQQRYPLKDFGRGYPVLGSWIVAGEAAGLGIREDGLITGNRARFVPHIILD
>Mature_381_residues
MQRLTLEPRPGWQASVAELGLLWHSDADGPYWDESAAYALSMEQVETLETATEEVHRLYLEAGDAIVRDDLLMASCGIPG
TYHRAVREAWQRRGPALDFGRFDFAWDGTGQPRLLEYNCDTPTSLLEASIIQWYWKEERFPDRDQFNSLHEKLLARWQAI
SGAMPGRRVWFTHVADHAHEDTMTTTYLRDLAEQAGLETRGLLIEQIGLDANGHVLDQDDYRITALFKLYPWEWLAAEEF
GQAILPRMAETIWLEPVWKMLWSNKAVLAVLWDLFPDHPNLLPASLIPGAVGPDFVAKPVLAREGANIEVVSHGKILARS
HGSYDASRMVYQQRYPLKDFGRGYPVLGSWIVAGEAAGLGIREDGLITGNRARFVPHIILD

Specific function: Unknown

COG id: COG0754

COG function: function code E; Glutathionylspermidine synthase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: To the N-terminal of E.coli gsp and to E.coli yjfC [H]

Homologues:

Organism=Escherichia coli, GI1789416, Length=390, Percent_Identity=41.5384615384615, Blast_Score=298, Evalue=3e-82,
Organism=Escherichia coli, GI1790629, Length=393, Percent_Identity=39.9491094147583, Blast_Score=269, Evalue=3e-73,
Organism=Escherichia coli, GI1789361, Length=374, Percent_Identity=28.8770053475936, Blast_Score=137, Evalue=1e-33,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005494
- InterPro:   IPR016185 [H]

Pfam domain/function: PF03738 GSP_synth [H]

EC number: NA

Molecular weight: Translated: 43118; Mature: 43118

Theoretical pI: Translated: 4.83; Mature: 4.83

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQRLTLEPRPGWQASVAELGLLWHSDADGPYWDESAAYALSMEQVETLETATEEVHRLYL
CCCCCCCCCCCCCHHHHHHHEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
EAGDAIVRDDLLMASCGIPGTYHRAVREAWQRRGPALDFGRFDFAWDGTGQPRLLEYNCD
HCCCHHHHHHHHEEECCCCHHHHHHHHHHHHHCCCCCCCCCEEEEECCCCCCEEEEECCC
TPTSLLEASIIQWYWKEERFPDRDQFNSLHEKLLARWQAISGAMPGRRVWFTHVADHAHE
CHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEHHHHHCCC
DTMTTTYLRDLAEQAGLETRGLLIEQIGLDANGHVLDQDDYRITALFKLYPWEWLAAEEF
CHHHHHHHHHHHHHCCCCHHCCHHHHHCCCCCCCEECCCCCEEEEEEEECCCHHHHHHHH
GQAILPRMAETIWLEPVWKMLWSNKAVLAVLWDLFPDHPNLLPASLIPGAVGPDFVAKPV
HHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCCCCCHHHCCCCCCCHHHHCCH
LAREGANIEVVSHGKILARSHGSYDASRMVYQQRYPLKDFGRGYPVLGSWIVAGEAAGLG
HHCCCCCEEEEECCEEEEECCCCCHHHHHHHHHCCCHHHHCCCCCCHHHEEEECCCCCCC
IREDGLITGNRARFVPHIILD
CCCCCEEECCCHHCCCEEECC
>Mature Secondary Structure
MQRLTLEPRPGWQASVAELGLLWHSDADGPYWDESAAYALSMEQVETLETATEEVHRLYL
CCCCCCCCCCCCCHHHHHHHEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
EAGDAIVRDDLLMASCGIPGTYHRAVREAWQRRGPALDFGRFDFAWDGTGQPRLLEYNCD
HCCCHHHHHHHHEEECCCCHHHHHHHHHHHHHCCCCCCCCCEEEEECCCCCCEEEEECCC
TPTSLLEASIIQWYWKEERFPDRDQFNSLHEKLLARWQAISGAMPGRRVWFTHVADHAHE
CHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEHHHHHCCC
DTMTTTYLRDLAEQAGLETRGLLIEQIGLDANGHVLDQDDYRITALFKLYPWEWLAAEEF
CHHHHHHHHHHHHHCCCCHHCCHHHHHCCCCCCCEECCCCCEEEEEEEECCCHHHHHHHH
GQAILPRMAETIWLEPVWKMLWSNKAVLAVLWDLFPDHPNLLPASLIPGAVGPDFVAKPV
HHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCCCCCHHHCCCCCCCHHHHCCH
LAREGANIEVVSHGKILARSHGSYDASRMVYQQRYPLKDFGRGYPVLGSWIVAGEAAGLG
HHCCCCCEEEEECCEEEEECCCCCHHHHHHHHHCCCHHHHCCCCCCHHHEEEECCCCCCC
IREDGLITGNRARFVPHIILD
CCCCCEEECCCHHCCCEEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]