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The map label for this gene is dinG [H]

Identifier: 87200375

GI number: 87200375

Start: 2509800

End: 2512523

Strand: Direct

Name: dinG [H]

Synonym: Saro_2362

Alternate gene names: 87200375

Gene position: 2509800-2512523 (Clockwise)

Preceding gene: 87200372

Following gene: 87200376

Centisome position: 70.47

GC content: 68.14

Gene sequence:

>2724_bases
GTGACGGACCACCCGGCCCTTTCCCTGCCAGCGATTCACGCGAGCCACGGCGGTTGCTGGCTGCGCGATGGCTTCGCCAC
GCGTGGCGTCGGCAAGGGCGAGGCGATCGTGGCAGCGGCGGACACACCGCTGCTGATGCTCAATGCACCGCTCATCGCCA
GCCGACTGGGCTACCCGGATCTTTCGGGGCTGGATCTGCTGGAACTGTTCGCGTTCATCCATCCGGCGCGGTTCATGGTT
CCCACGCCTAAGGGCCTTGCCCATGCGTTGGGACTGGACGCGCCTGCCGATGACGACAAGGTCCCGCAGCTTCTGCAGGA
AGCGGCAGAGGCTCTACTGGCGACCTGCGAGCGAGAGGACTGGGCCGAGCGTGAAGGCGCATGGACCGCACTTCAATCGC
TGGTGCGCATGCGCTGGCCTTGGGCGACCTTGCTCACGCCACGGATCGAGAAGCCAAAGCGCGCGGAACGCTGGCTCTTC
ACGCGCCTGCCGGAGTGGGAGGAAACAGCGGATCGCCCCCAGCCGGCGCAAGTGCTGCTGGGCGAAGACGCGGTGGTTTC
ACGGCTCGCGGAACTGACCGGCGCGGGCGCGGAAGCGCGTCCGGCACAGCAGGCCTACGCCCGGGAAGCGGCAAGAATGT
TCGCCCCACGCCTGGCCGAGCGCCGCCCCCACGTGGTGCTGGCGCAGGCCGGAACAGGGACTGGCAAGACATTCGGCTAC
CTTGCCCCGGCATCGCTCTGGGCGGAGGGATCCGGCGGTACAGTCTGGGTTTCCACCTATACCAAGGCACTGCAACGGCA
ATTGCGGCGCGAGAGCAGACGCGCGTTTCCCGCGTTGCGGAACGGCAAGCCGCCGGTGGTGGTGCGCAAGGGACGCGAGA
ACTACCTCTGCCTCCTGAACCTGGAAGACGCGCTGCAAGGGGGATTTGGCGGCCGCGCCGCAATCCTTGCCCAGCTTGTC
GCGCGCTGGGCCGCCTACAGCCAGGACGGCGACATAATAGGCGGCGACCTTCCCGGCTGGCTCGGCACGCTATTCCGCAA
GCGCGGCATCACGGCGCTCACCGACCAGCGCGGCGAATGCGTCTATGCGGGCTGCCCGCACTACCGGAAGTGCTTCATCG
AGCGCGCAGCCCGCGCCTCTGCCGACGCAGAACTTGTGATCGCCAACCATGCGCTGGTCATGGTCAACGCCGCGCGCGGC
AGGGACGCCGCACAACGCCCGACGCGGATCGTTTTCGACGAAGGGCATCATGTGTTCGAGGCTGCGGATTCGACCTTTTC
GGCAGCCCTGACCGGGGCCGAGACGATCGAGCTTCGCCGTTGGGTCATCGGGCCTGAAGGCAAGTCGCGCGGGCGGCGGC
GCGGGCTTTCGGCGCGCCTCGCGGATGTGGCTTCCTACGACGAGGAAGGGGCGAAAGCGATTGCCCGCGCGATAGAGGCG
GCCGAGGCGCTTCCTTCGGAAGGCTGGCTGGCGCGCGTAGTGGAAGGGACTCCCAGCGGCCCCATCGAGCAACTGCTCAG
CGCTGCACGCGCACTCACCTATTCGCGCGATGAAAGCGGCGGACAGGAGGCGGGCTATGGCCTCGAGACGGAGATCGCGC
AGCTTGACGGCGCCTTTGTCGAAGTGGCCGGAGCCGCCCAGGAAGCGCTCGAGGCCCTGCGCAAGCCGCTGGTACGCCTG
GGGCTCAGGCTCGAGGCGATCGTCGAGGACGGTCCGGACTGGCTCGACGGCCCTGCTCGCGCACGCATCGAAGGCGCGCG
CGGCGCCATCGGCTGGCGCACCGACCTCGTCGCGGGATGGATCGCCATGCTGGCGCGACTGGGCGGGCCCGGGGATCCCG
ATTTTGTCGACTGGCTCGCGGTGGAACGGTCAGACGGACGCGAATGGGACGTGGGCCTGCACCGCCATTACCTCGACCCG
ATGAAACCCTTTGCCGAAACGGTGCTCGCCCCCGCGCACGGCGTGATGATGACCTCGGCAACCCTGCGCGACGGCGACGA
CTGGACGAGCGCGGTGGAGCGCAGCGGCGCGCAGCACCTGGACCTTGCCCCGCGCCTGTTCGGCGCGGACAGCCCGTTCG
ACTACGCCAACCAGGCCGAAGTGCTGATCGTGACGGACGTGCCCAAAGGCGACATTCCGGCGCTCGCGGCGGCGTACGGC
AGGTTGATCGAGGCATCGGGTGGCGGCGCGCTCGGCCTGTTCACGGCAATCCGGCGGTTGCGAGCAGTCTACAGCCGGAT
CGCGGACCGGCTGGCGCGTGGCGGTCTTCCGCTGTTCGCGCAGCACGTCGACCCGATCGACACGGGCACGCTGGTCGATA
TCTTTCGCGACGATCCGCGCGCGTCCTTGCTCGGCACCGACGCCCTGCGTGACGGCGTGGACGTGCCGGGACACTCCTTG
CGCCTGGTGGTGATGGAGCAGGTGCCATGGCCAAAGCCTTCGATTCTCCACCGCGCTCGCCGGCTCGCCGGCGGTGGACA
GGCGCACGACGACCGCATCATTCGTGCCCGGCTGGCGCAGGCGTTCGGACGCCTGATCCGTTCAGCCGGTGACAAGGGCC
ATTTCGTCGTGCTTTCGGCGGCGTTCCCGTCCCGGCTTCTCAGTGCGTTTCCAGCCGGTACGCCGATCAGAAGGGTGACG
CTGGATGCCGCTTTACAAAGCATCGTGGCCGGTGTTTCTGGTTCAACTGCACCGGCAACAACGCCGACCGAGGGAATTTC
GTGA

Upstream 100 bases:

>100_bases
CAGGCGGGGTTTAAGGGCGGTGGTTAACCGAGGTGCAGGGATCGGATTTCCACTCCTGCCGGGCTTGCCCCGTGTTCCAT
TCCTGTTCTAACGCTGGACC

Downstream 100 bases:

>100_bases
AGACGCTCGCCCTGTTCCGCCACGCCAAATCGGACTGGAGCGATGCGCGTGCACGGGACTTCGACCGTCCGCTGAACGAG
CGCGGGCAACGGGGCGCGCG

Product: helicase c2

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 907; Mature: 906

Protein sequence:

>907_residues
MTDHPALSLPAIHASHGGCWLRDGFATRGVGKGEAIVAAADTPLLMLNAPLIASRLGYPDLSGLDLLELFAFIHPARFMV
PTPKGLAHALGLDAPADDDKVPQLLQEAAEALLATCEREDWAEREGAWTALQSLVRMRWPWATLLTPRIEKPKRAERWLF
TRLPEWEETADRPQPAQVLLGEDAVVSRLAELTGAGAEARPAQQAYAREAARMFAPRLAERRPHVVLAQAGTGTGKTFGY
LAPASLWAEGSGGTVWVSTYTKALQRQLRRESRRAFPALRNGKPPVVVRKGRENYLCLLNLEDALQGGFGGRAAILAQLV
ARWAAYSQDGDIIGGDLPGWLGTLFRKRGITALTDQRGECVYAGCPHYRKCFIERAARASADAELVIANHALVMVNAARG
RDAAQRPTRIVFDEGHHVFEAADSTFSAALTGAETIELRRWVIGPEGKSRGRRRGLSARLADVASYDEEGAKAIARAIEA
AEALPSEGWLARVVEGTPSGPIEQLLSAARALTYSRDESGGQEAGYGLETEIAQLDGAFVEVAGAAQEALEALRKPLVRL
GLRLEAIVEDGPDWLDGPARARIEGARGAIGWRTDLVAGWIAMLARLGGPGDPDFVDWLAVERSDGREWDVGLHRHYLDP
MKPFAETVLAPAHGVMMTSATLRDGDDWTSAVERSGAQHLDLAPRLFGADSPFDYANQAEVLIVTDVPKGDIPALAAAYG
RLIEASGGGALGLFTAIRRLRAVYSRIADRLARGGLPLFAQHVDPIDTGTLVDIFRDDPRASLLGTDALRDGVDVPGHSL
RLVVMEQVPWPKPSILHRARRLAGGGQAHDDRIIRARLAQAFGRLIRSAGDKGHFVVLSAAFPSRLLSAFPAGTPIRRVT
LDAALQSIVAGVSGSTAPATTPTEGIS

Sequences:

>Translated_907_residues
MTDHPALSLPAIHASHGGCWLRDGFATRGVGKGEAIVAAADTPLLMLNAPLIASRLGYPDLSGLDLLELFAFIHPARFMV
PTPKGLAHALGLDAPADDDKVPQLLQEAAEALLATCEREDWAEREGAWTALQSLVRMRWPWATLLTPRIEKPKRAERWLF
TRLPEWEETADRPQPAQVLLGEDAVVSRLAELTGAGAEARPAQQAYAREAARMFAPRLAERRPHVVLAQAGTGTGKTFGY
LAPASLWAEGSGGTVWVSTYTKALQRQLRRESRRAFPALRNGKPPVVVRKGRENYLCLLNLEDALQGGFGGRAAILAQLV
ARWAAYSQDGDIIGGDLPGWLGTLFRKRGITALTDQRGECVYAGCPHYRKCFIERAARASADAELVIANHALVMVNAARG
RDAAQRPTRIVFDEGHHVFEAADSTFSAALTGAETIELRRWVIGPEGKSRGRRRGLSARLADVASYDEEGAKAIARAIEA
AEALPSEGWLARVVEGTPSGPIEQLLSAARALTYSRDESGGQEAGYGLETEIAQLDGAFVEVAGAAQEALEALRKPLVRL
GLRLEAIVEDGPDWLDGPARARIEGARGAIGWRTDLVAGWIAMLARLGGPGDPDFVDWLAVERSDGREWDVGLHRHYLDP
MKPFAETVLAPAHGVMMTSATLRDGDDWTSAVERSGAQHLDLAPRLFGADSPFDYANQAEVLIVTDVPKGDIPALAAAYG
RLIEASGGGALGLFTAIRRLRAVYSRIADRLARGGLPLFAQHVDPIDTGTLVDIFRDDPRASLLGTDALRDGVDVPGHSL
RLVVMEQVPWPKPSILHRARRLAGGGQAHDDRIIRARLAQAFGRLIRSAGDKGHFVVLSAAFPSRLLSAFPAGTPIRRVT
LDAALQSIVAGVSGSTAPATTPTEGIS
>Mature_906_residues
TDHPALSLPAIHASHGGCWLRDGFATRGVGKGEAIVAAADTPLLMLNAPLIASRLGYPDLSGLDLLELFAFIHPARFMVP
TPKGLAHALGLDAPADDDKVPQLLQEAAEALLATCEREDWAEREGAWTALQSLVRMRWPWATLLTPRIEKPKRAERWLFT
RLPEWEETADRPQPAQVLLGEDAVVSRLAELTGAGAEARPAQQAYAREAARMFAPRLAERRPHVVLAQAGTGTGKTFGYL
APASLWAEGSGGTVWVSTYTKALQRQLRRESRRAFPALRNGKPPVVVRKGRENYLCLLNLEDALQGGFGGRAAILAQLVA
RWAAYSQDGDIIGGDLPGWLGTLFRKRGITALTDQRGECVYAGCPHYRKCFIERAARASADAELVIANHALVMVNAARGR
DAAQRPTRIVFDEGHHVFEAADSTFSAALTGAETIELRRWVIGPEGKSRGRRRGLSARLADVASYDEEGAKAIARAIEAA
EALPSEGWLARVVEGTPSGPIEQLLSAARALTYSRDESGGQEAGYGLETEIAQLDGAFVEVAGAAQEALEALRKPLVRLG
LRLEAIVEDGPDWLDGPARARIEGARGAIGWRTDLVAGWIAMLARLGGPGDPDFVDWLAVERSDGREWDVGLHRHYLDPM
KPFAETVLAPAHGVMMTSATLRDGDDWTSAVERSGAQHLDLAPRLFGADSPFDYANQAEVLIVTDVPKGDIPALAAAYGR
LIEASGGGALGLFTAIRRLRAVYSRIADRLARGGLPLFAQHVDPIDTGTLVDIFRDDPRASLLGTDALRDGVDVPGHSLR
LVVMEQVPWPKPSILHRARRLAGGGQAHDDRIIRARLAQAFGRLIRSAGDKGHFVVLSAAFPSRLLSAFPAGTPIRRVTL
DAALQSIVAGVSGSTAPATTPTEGIS

Specific function: Probable helicase involved in DNA repair and perhaps also replication [H]

COG id: COG1199

COG function: function code KL; Rad3-related DNA helicases

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 helicase C-terminal domain [H]

Homologues:

Organism=Escherichia coli, GI1788110, Length=249, Percent_Identity=29.718875502008, Blast_Score=99, Evalue=1e-21,
Organism=Escherichia coli, GI1787018, Length=212, Percent_Identity=31.6037735849057, Blast_Score=71, Evalue=3e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR014001
- InterPro:   IPR006054
- InterPro:   IPR006310
- InterPro:   IPR006055
- InterPro:   IPR013520
- InterPro:   IPR014013
- InterPro:   IPR006555
- InterPro:   IPR001650
- InterPro:   IPR006935
- InterPro:   IPR012337 [H]

Pfam domain/function: PF00929 Exonuc_X-T; PF04851 ResIII [H]

EC number: =3.6.4.12 [H]

Molecular weight: Translated: 97543; Mature: 97412

Theoretical pI: Translated: 6.84; Mature: 6.84

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
1.9 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
1.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTDHPALSLPAIHASHGGCWLRDGFATRGVGKGEAIVAAADTPLLMLNAPLIASRLGYPD
CCCCCCCCCCEEECCCCCEEEECCCCCCCCCCCCEEEEECCCCEEEECCCHHHHHCCCCC
LSGLDLLELFAFIHPARFMVPTPKGLAHALGLDAPADDDKVPQLLQEAAEALLATCERED
CCCHHHHHHHHHHCCCCEECCCCHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHCHHH
WAEREGAWTALQSLVRMRWPWATLLTPRIEKPKRAERWLFTRLPEWEETADRPQPAQVLL
HHHHCHHHHHHHHHHHHCCCHHHHCCCCCCCCHHHHHHHHHCCCCHHHHCCCCCCCCEEE
GEDAVVSRLAELTGAGAEARPAQQAYAREAARMFAPRLAERRPHVVLAQAGTGTGKTFGY
CCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCEE
LAPASLWAEGSGGTVWVSTYTKALQRQLRRESRRAFPALRNGKPPVVVRKGRENYLCLLN
ECCHHHEECCCCCEEEHHHHHHHHHHHHHHHHHHHCCHHHCCCCCEEEECCCCCEEEEEE
LEDALQGGFGGRAAILAQLVARWAAYSQDGDIIGGDLPGWLGTLFRKRGITALTDQRGEC
CHHHHCCCCCCHHHHHHHHHHHHHHCCCCCCEECCCCCHHHHHHHHHCCCCEECCCCCCE
VYAGCPHYRKCFIERAARASADAELVIANHALVMVNAARGRDAAQRPTRIVFDEGHHVFE
EEECCCHHHHHHHHHHHHCCCCCEEEEECCEEEEEECCCCCCHHCCCCEEEEECCCCHHH
AADSTFSAALTGAETIELRRWVIGPEGKSRGRRRGLSARLADVASYDEEGAKAIARAIEA
HCCCHHHHHHCCHHHHHHHHEEECCCCCCHHHHCCCHHHHHHHHHCCHHHHHHHHHHHHH
AEALPSEGWLARVVEGTPSGPIEQLLSAARALTYSRDESGGQEAGYGLETEIAQLDGAFV
HHHCCCCCCEEEEECCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHCCHHH
EVAGAAQEALEALRKPLVRLGLRLEAIVEDGPDWLDGPARARIEGARGAIGWRTDLVAGW
HHHHHHHHHHHHHHHHHHHHCCHHEEHHCCCCCCCCCCCHHEECCCCCCCCHHHHHHHHH
IAMLARLGGPGDPDFVDWLAVERSDGREWDVGLHRHYLDPMKPFAETVLAPAHGVMMTSA
HHHHHHHCCCCCCCHHHHHEEECCCCCCCCCCHHHHHCCHHHHHHHHHHCCCCCCEEEEC
TLRDGDDWTSAVERSGAQHLDLAPRLFGADSPFDYANQAEVLIVTDVPKGDIPALAAAYG
CCCCCCHHHHHHHHCCCCCCCCCHHHCCCCCCCCCCCCCCEEEEECCCCCCCHHHHHHHH
RLIEASGGGALGLFTAIRRLRAVYSRIADRLARGGLPLFAQHVDPIDTGTLVDIFRDDPR
HHEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHCCCCCCCCCEEEEECCCCC
ASLLGTDALRDGVDVPGHSLRLVVMEQVPWPKPSILHRARRLAGGGQAHDDRIIRARLAQ
HHHHCCHHHHCCCCCCCCCEEEEEEECCCCCCHHHHHHHHHHCCCCCCCHHHHHHHHHHH
AFGRLIRSAGDKGHFVVLSAAFPSRLLSAFPAGTPIRRVTLDAALQSIVAGVSGSTAPAT
HHHHHHHHCCCCCCEEEEECHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCC
TPTEGIS
CCCCCCC
>Mature Secondary Structure 
TDHPALSLPAIHASHGGCWLRDGFATRGVGKGEAIVAAADTPLLMLNAPLIASRLGYPD
CCCCCCCCCEEECCCCCEEEECCCCCCCCCCCCEEEEECCCCEEEECCCHHHHHCCCCC
LSGLDLLELFAFIHPARFMVPTPKGLAHALGLDAPADDDKVPQLLQEAAEALLATCERED
CCCHHHHHHHHHHCCCCEECCCCHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHCHHH
WAEREGAWTALQSLVRMRWPWATLLTPRIEKPKRAERWLFTRLPEWEETADRPQPAQVLL
HHHHCHHHHHHHHHHHHCCCHHHHCCCCCCCCHHHHHHHHHCCCCHHHHCCCCCCCCEEE
GEDAVVSRLAELTGAGAEARPAQQAYAREAARMFAPRLAERRPHVVLAQAGTGTGKTFGY
CCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCEE
LAPASLWAEGSGGTVWVSTYTKALQRQLRRESRRAFPALRNGKPPVVVRKGRENYLCLLN
ECCHHHEECCCCCEEEHHHHHHHHHHHHHHHHHHHCCHHHCCCCCEEEECCCCCEEEEEE
LEDALQGGFGGRAAILAQLVARWAAYSQDGDIIGGDLPGWLGTLFRKRGITALTDQRGEC
CHHHHCCCCCCHHHHHHHHHHHHHHCCCCCCEECCCCCHHHHHHHHHCCCCEECCCCCCE
VYAGCPHYRKCFIERAARASADAELVIANHALVMVNAARGRDAAQRPTRIVFDEGHHVFE
EEECCCHHHHHHHHHHHHCCCCCEEEEECCEEEEEECCCCCCHHCCCCEEEEECCCCHHH
AADSTFSAALTGAETIELRRWVIGPEGKSRGRRRGLSARLADVASYDEEGAKAIARAIEA
HCCCHHHHHHCCHHHHHHHHEEECCCCCCHHHHCCCHHHHHHHHHCCHHHHHHHHHHHHH
AEALPSEGWLARVVEGTPSGPIEQLLSAARALTYSRDESGGQEAGYGLETEIAQLDGAFV
HHHCCCCCCEEEEECCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHCCHHH
EVAGAAQEALEALRKPLVRLGLRLEAIVEDGPDWLDGPARARIEGARGAIGWRTDLVAGW
HHHHHHHHHHHHHHHHHHHHCCHHEEHHCCCCCCCCCCCHHEECCCCCCCCHHHHHHHHH
IAMLARLGGPGDPDFVDWLAVERSDGREWDVGLHRHYLDPMKPFAETVLAPAHGVMMTSA
HHHHHHHCCCCCCCHHHHHEEECCCCCCCCCCHHHHHCCHHHHHHHHHHCCCCCCEEEEC
TLRDGDDWTSAVERSGAQHLDLAPRLFGADSPFDYANQAEVLIVTDVPKGDIPALAAAYG
CCCCCCHHHHHHHHCCCCCCCCCHHHCCCCCCCCCCCCCCEEEEECCCCCCCHHHHHHHH
RLIEASGGGALGLFTAIRRLRAVYSRIADRLARGGLPLFAQHVDPIDTGTLVDIFRDDPR
HHEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHCCCCCCCCCEEEEECCCCC
ASLLGTDALRDGVDVPGHSLRLVVMEQVPWPKPSILHRARRLAGGGQAHDDRIIRARLAQ
HHHHCCHHHHCCCCCCCCCEEEEEEECCCCCCHHHHHHHHHHCCCCCCCHHHHHHHHHHH
AFGRLIRSAGDKGHFVVLSAAFPSRLLSAFPAGTPIRRVTLDAALQSIVAGVSGSTAPAT
HHHHHHHHCCCCCCEEEEECHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCC
TPTEGIS
CCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8760912; 9384377 [H]