Definition Novosphingobium aromaticivorans DSM 12444 chromosome, complete genome.
Accession NC_007794
Length 3,561,584

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The map label for this gene is 87200371

Identifier: 87200371

GI number: 87200371

Start: 2505304

End: 2505699

Strand: Direct

Name: 87200371

Synonym: Saro_2358

Alternate gene names: NA

Gene position: 2505304-2505699 (Clockwise)

Preceding gene: 87200370

Following gene: 87200372

Centisome position: 70.34

GC content: 66.92

Gene sequence:

>396_bases
ATGAAGAAGAACCTGGCCTTGACGACCGCGATGGCGGCCACTCTGGCCGGCTGTTCCGGCGGCAACGAATGGGACGACGG
CGTCGTCGCGGACCGGGACACCGCGGTCTGCGTGGACCAGGACGGCCGCCGCGTGATTGACGACAACTGCGACGAGCGCC
GCGGCGGAAGGGTCGGCGGTTCGCACTTCTGGTACTACGTCAACCGCGGCAACCGCGTGCCTTACTACGGCGATCCGGTC
CGGGATCCCAGCTATGGCTACAAGGGCAGCTACTTCCCGACCAAGGGCGCAACATATGCGCAGGCGCCCGCTTCGGCGAA
CATGGTGCGCAGCAAGCCGGTGGCGAGGGGCGGCTTCGGGTCCAAGGGCAAGTTCTTCGGCGGCAGTTGGTCCTGA

Upstream 100 bases:

>100_bases
GCACCGCATCCGGCCTGTTCGTCGGCGGCATGGGGCTTGGCGTCGGCATTCTCCAGGCCGCTTGCATGGTGCCCTGAGCA
GTGCCCGGAAGGACCCCGCG

Downstream 100 bases:

>100_bases
ACCGTGCAGCGCCTGACGCTTGAGCCCCGCCCCGGCTGGCAGGCGTCCGTCGCCGAACTGGGCCTGCTCTGGCATAGCGA
CGCGGACGGTCCCTACTGGG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 131; Mature: 131

Protein sequence:

>131_residues
MKKNLALTTAMAATLAGCSGGNEWDDGVVADRDTAVCVDQDGRRVIDDNCDERRGGRVGGSHFWYYVNRGNRVPYYGDPV
RDPSYGYKGSYFPTKGATYAQAPASANMVRSKPVARGGFGSKGKFFGGSWS

Sequences:

>Translated_131_residues
MKKNLALTTAMAATLAGCSGGNEWDDGVVADRDTAVCVDQDGRRVIDDNCDERRGGRVGGSHFWYYVNRGNRVPYYGDPV
RDPSYGYKGSYFPTKGATYAQAPASANMVRSKPVARGGFGSKGKFFGGSWS
>Mature_131_residues
MKKNLALTTAMAATLAGCSGGNEWDDGVVADRDTAVCVDQDGRRVIDDNCDERRGGRVGGSHFWYYVNRGNRVPYYGDPV
RDPSYGYKGSYFPTKGATYAQAPASANMVRSKPVARGGFGSKGKFFGGSWS

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 14120; Mature: 14120

Theoretical pI: Translated: 9.37; Mature: 9.37

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.3 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
4.6 %Cys+Met (Translated Protein)
2.3 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
4.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKNLALTTAMAATLAGCSGGNEWDDGVVADRDTAVCVDQDGRRVIDDNCDERRGGRVGG
CCCCHHHHHHHHHHHHCCCCCCCCCCCEEECCCCEEEECCCCCEECCCCCCCCCCCCCCC
SHFWYYVNRGNRVPYYGDPVRDPSYGYKGSYFPTKGATYAQAPASANMVRSKPVARGGFG
CEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCC
SKGKFFGGSWS
CCCCCCCCCCC
>Mature Secondary Structure
MKKNLALTTAMAATLAGCSGGNEWDDGVVADRDTAVCVDQDGRRVIDDNCDERRGGRVGG
CCCCHHHHHHHHHHHHCCCCCCCCCCCEEECCCCEEEECCCCCEECCCCCCCCCCCCCCC
SHFWYYVNRGNRVPYYGDPVRDPSYGYKGSYFPTKGATYAQAPASANMVRSKPVARGGFG
CEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCC
SKGKFFGGSWS
CCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA