| Definition | Novosphingobium aromaticivorans DSM 12444 chromosome, complete genome. |
|---|---|
| Accession | NC_007794 |
| Length | 3,561,584 |
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The map label for this gene is 87200286
Identifier: 87200286
GI number: 87200286
Start: 2411490
End: 2411978
Strand: Reverse
Name: 87200286
Synonym: Saro_2272
Alternate gene names: NA
Gene position: 2411978-2411490 (Counterclockwise)
Preceding gene: 87200287
Following gene: 87200285
Centisome position: 67.72
GC content: 65.64
Gene sequence:
>489_bases ATGGCGGGCGGGCTCCTCATCGTCTGGCACAGCCGCACTGGCGCTGCCGGGGCGATGGCCCGCGCCGCTTTCGAAGGCGG GGTTCGGGAAGGGCCCTGCCGGATTGTCAGCGCGGCAGAGGCGACCGATGCGAACATGTTGTCCGCGTCCGGTTACCTGT TCTGCTGCCCGGAAAACCTCGGTTCGATGACCGGTGCGATGAAGGAGTTCTTCGACCGTCTCTACTATCCGCTTCTCGGC CGGATCGAAGGCCGCGCATTTGCGACGCTGATCGCGGCCGGTTCGGATGGAACCGGCGCGGAACGCCAGATCGAAAGGAT CGCCACCGGCTGGCGGCTGCGCCGGGTGGCTGATCCGCTGATCGTCTGCACCCATGCGCAGACGCCCGAAGCCATCCTCG CGCCCAAGACGCTGGATGCGGGGACATTGCAGACCTGTTGCGATTTGGGACAGGCGATCTCCGGAGGTCTGGCGCTAGGG GTTTTCTAA
Upstream 100 bases:
>100_bases GTGCAAGCCCAAGAAGAAGGGGCTGGGCGGATTGCTCGGGGGTGCCGTGGGCGGTGCACTGGGCGTGCCCGGGGCTGGCG GCAACGGCTGCTGATCGCGC
Downstream 100 bases:
>100_bases GCTTTCTCGCGCTATGATCGGTTACGGAGCATTCGTGATCTGGGCACGGACTCGACGGCAGTGCCGCGGTCGTGCAAATT CTCGGCGGAACGAAAGGGAT
Product: hypothetical protein
Products: NA
Alternate protein names: Flavodoxin; Flavodoxin/Nitric Oxide Synthase; NAD(P)H DehydrogenaseNADPH-Dependent FMN Reductase; NAD(P)H Dehydrogenase; NADPH-Dependent FMN Reductase; Flavodoxin-Like Protein; Oxidoreductase; Flavoprotein
Number of amino acids: Translated: 162; Mature: 161
Protein sequence:
>162_residues MAGGLLIVWHSRTGAAGAMARAAFEGGVREGPCRIVSAAEATDANMLSASGYLFCCPENLGSMTGAMKEFFDRLYYPLLG RIEGRAFATLIAAGSDGTGAERQIERIATGWRLRRVADPLIVCTHAQTPEAILAPKTLDAGTLQTCCDLGQAISGGLALG VF
Sequences:
>Translated_162_residues MAGGLLIVWHSRTGAAGAMARAAFEGGVREGPCRIVSAAEATDANMLSASGYLFCCPENLGSMTGAMKEFFDRLYYPLLG RIEGRAFATLIAAGSDGTGAERQIERIATGWRLRRVADPLIVCTHAQTPEAILAPKTLDAGTLQTCCDLGQAISGGLALG VF >Mature_161_residues AGGLLIVWHSRTGAAGAMARAAFEGGVREGPCRIVSAAEATDANMLSASGYLFCCPENLGSMTGAMKEFFDRLYYPLLGR IEGRAFATLIAAGSDGTGAERQIERIATGWRLRRVADPLIVCTHAQTPEAILAPKTLDAGTLQTCCDLGQAISGGLALGV F
Specific function: Unknown
COG id: COG0655
COG function: function code R; Multimeric flavodoxin WrbA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 16924; Mature: 16792
Theoretical pI: Translated: 6.49; Mature: 6.49
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.7 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 6.8 %Cys+Met (Translated Protein) 3.7 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 6.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAGGLLIVWHSRTGAAGAMARAAFEGGVREGPCRIVSAAEATDANMLSASGYLFCCPENL CCCCEEEEEECCCCCHHHHHHHHHHCCCCCCCEEEEECCCCCCCCEEECCCEEEECCHHH GSMTGAMKEFFDRLYYPLLGRIEGRAFATLIAAGSDGTGAERQIERIATGWRLRRVADPL HHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEEECCCCCCHHHHHHHHHHHHHHHHHCCCE IVCTHAQTPEAILAPKTLDAGTLQTCCDLGQAISGGLALGVF EEEECCCCCCCEECCCCCCCCHHHHHHHHHHHHCCCEEECCC >Mature Secondary Structure AGGLLIVWHSRTGAAGAMARAAFEGGVREGPCRIVSAAEATDANMLSASGYLFCCPENL CCCEEEEEECCCCCHHHHHHHHHHCCCCCCCEEEEECCCCCCCCEEECCCEEEECCHHH GSMTGAMKEFFDRLYYPLLGRIEGRAFATLIAAGSDGTGAERQIERIATGWRLRRVADPL HHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEEECCCCCCHHHHHHHHHHHHHHHHHCCCE IVCTHAQTPEAILAPKTLDAGTLQTCCDLGQAISGGLALGVF EEEECCCCCCCEECCCCCCCCHHHHHHHHHHHHCCCEEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA