| Definition | Novosphingobium aromaticivorans DSM 12444 chromosome, complete genome. |
|---|---|
| Accession | NC_007794 |
| Length | 3,561,584 |
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The map label for this gene is 87200283
Identifier: 87200283
GI number: 87200283
Start: 2409090
End: 2410085
Strand: Direct
Name: 87200283
Synonym: Saro_2269
Alternate gene names: NA
Gene position: 2409090-2410085 (Clockwise)
Preceding gene: 87200282
Following gene: 87200288
Centisome position: 67.64
GC content: 66.27
Gene sequence:
>996_bases ATGCCCCTGCCCCCGCTATTCGCAAACCTGCGCCTGCCCGTCATCGCATCGCCGCTGTTCATCATTTCCTGCCCGGAACT GGTCATCGCGCAGTGCAAGGCCGGCATCGTCGGCTCCTTCCCTTCGCTCAACGCCCGCCCGATCAGCCAGCTCGATGAAT GGCTGCACCAGATCACCGAGGAACTGGCCGCCCACAACCGCGCAAATCCCGACCGGCCCGCTGCGCCTTTCGCGGTGAAC CAGATCGTCCACAAGACCAACAACCGCCTCGACGAGGACATGGCGCTGTGCGCCAAGTGGCAGGTTCCCATGCTCATCAC CTCGCTCGGCGCGCGCGAGGACGTCTACAATGCCGCGCACGGCTGGGGCGGCATCGTGCTGCATGACGTCATCAACGACC GCTTCGCGCGCAAGGCGATCGAAAAGGGCGCGGACGGCCTGATCCCGGTCGCGGCAGGGGCCGGCGGGCACGCCGGCGCG CAATCGCCCTTCGCCCTGATGCAGGAAATCCGCGAGTGGTTCGACGGCCTCGTCGCCCTCTCCGGCGCTATCGCGCACGG GCAATCCATCCTTGCGGCACAGGCACTTGGCGCCGACTTCGCCTACATCGGCTCAGCCTGGATCGCCACCGAGGAGGCGA ACGCCAACGCGGCCTACAAGCAGGCCATCGTCGACAGCCGCGCCGACGACATCGTCTATTCCAACCTCTTCACCGGGGTC CACGGCAACTACCTGCGCTCCTCGATCGTCAACGCCGGGCTCGATCCCGAAAACCTGCCGGAAAGCGACCCGAGCAAGAT GAACTTCGGCTCGGGCGGCAATACCGATGCGAAGGCGTGGAAGGACATCTGGGGGTCGGGACAAGGCATCGGCGCCGTGT CCGCGATCGAACCGGTGGCGACGCGGGTGGACCGGCTCGAGCGGCAGTATCGCCAGGCCGCAGAGGCGCTTTCGGCAAAC TCCGCACCCTTCCTGAAGGAGACCAGGTACGTCTAG
Upstream 100 bases:
>100_bases GCTGGAGGACCTGCTGGCCTGACCAGCTTTGACAAGCTGCCCGGCATGATCTAGCCATTTTAACCATTCGATTAAACACA CCTTCAAGGACCCGAGCCGA
Downstream 100 bases:
>100_bases GTGCCGTTAGGTGCTTTTAGGTGTCGTTAAGCGACTTTCGCGTTCCAGCCGGTGGCGGACCATAAAAGGTCCGCCATTTC ATCGAGATGGCTGAAATCCA
Product: 2-nitropropane dioxygenase
Products: NA
Alternate protein names: 2-Nitropropane Dioxygenase; 2-Nitropropane Dioxygenase Family Protein; Oxidoreductase 2-Nitropropane Dioxygenase Family; Dioxygenase; Oxidoreductase; 2-Nitropropane Dioxygenase Family; 2-Nitropropane Dioxygenase Family Oxidoreductase; 2-Nitropropane Dioxygenase Npd; Dioxygenases Related 2-Nitropropane Dioxygenase; 2-Nitropropane Dioxygenase-Like Dioxygenase; Dioxygenase Protein; Transmembrane Protein; 2-Nitropropane Dioxygenase Protein; Dioxygenase Oxidoreductase -Nitropropane Dioxygenase Npd
Number of amino acids: Translated: 331; Mature: 330
Protein sequence:
>331_residues MPLPPLFANLRLPVIASPLFIISCPELVIAQCKAGIVGSFPSLNARPISQLDEWLHQITEELAAHNRANPDRPAAPFAVN QIVHKTNNRLDEDMALCAKWQVPMLITSLGAREDVYNAAHGWGGIVLHDVINDRFARKAIEKGADGLIPVAAGAGGHAGA QSPFALMQEIREWFDGLVALSGAIAHGQSILAAQALGADFAYIGSAWIATEEANANAAYKQAIVDSRADDIVYSNLFTGV HGNYLRSSIVNAGLDPENLPESDPSKMNFGSGGNTDAKAWKDIWGSGQGIGAVSAIEPVATRVDRLERQYRQAAEALSAN SAPFLKETRYV
Sequences:
>Translated_331_residues MPLPPLFANLRLPVIASPLFIISCPELVIAQCKAGIVGSFPSLNARPISQLDEWLHQITEELAAHNRANPDRPAAPFAVN QIVHKTNNRLDEDMALCAKWQVPMLITSLGAREDVYNAAHGWGGIVLHDVINDRFARKAIEKGADGLIPVAAGAGGHAGA QSPFALMQEIREWFDGLVALSGAIAHGQSILAAQALGADFAYIGSAWIATEEANANAAYKQAIVDSRADDIVYSNLFTGV HGNYLRSSIVNAGLDPENLPESDPSKMNFGSGGNTDAKAWKDIWGSGQGIGAVSAIEPVATRVDRLERQYRQAAEALSAN SAPFLKETRYV >Mature_330_residues PLPPLFANLRLPVIASPLFIISCPELVIAQCKAGIVGSFPSLNARPISQLDEWLHQITEELAAHNRANPDRPAAPFAVNQ IVHKTNNRLDEDMALCAKWQVPMLITSLGAREDVYNAAHGWGGIVLHDVINDRFARKAIEKGADGLIPVAAGAGGHAGAQ SPFALMQEIREWFDGLVALSGAIAHGQSILAAQALGADFAYIGSAWIATEEANANAAYKQAIVDSRADDIVYSNLFTGVH GNYLRSSIVNAGLDPENLPESDPSKMNFGSGGNTDAKAWKDIWGSGQGIGAVSAIEPVATRVDRLERQYRQAAEALSANS APFLKETRYV
Specific function: Unknown
COG id: COG2070
COG function: function code R; Dioxygenases related to 2-nitropropane dioxygenase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 35399; Mature: 35268
Theoretical pI: Translated: 5.35; Mature: 5.35
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPLPPLFANLRLPVIASPLFIISCPELVIAQCKAGIVGSFPSLNARPISQLDEWLHQITE CCCCCCHHCCCCHHHHCCCCEEECHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHH ELAAHNRANPDRPAAPFAVNQIVHKTNNRLDEDMALCAKWQVPMLITSLGAREDVYNAAH HHHHCCCCCCCCCCCCHHHHHHHHHHCCCHHHHHHHHHHCCHHHHHHHHCCHHHHHHHHC GWGGIVLHDVINDRFARKAIEKGADGLIPVAAGAGGHAGAQSPFALMQEIREWFDGLVAL CCCCHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHH SGAIAHGQSILAAQALGADFAYIGSAWIATEEANANAAYKQAIVDSRADDIVYSNLFTGV HHHHHHHHHHHHHHHHCCCHHHHCCHHEEECCCCCHHHHHHHHHHCCHHHHHHHHHHHCC HGNYLRSSIVNAGLDPENLPESDPSKMNFGSGGNTDAKAWKDIWGSGQGIGAVSAIEPVA CHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCHHHHHHHHH TRVDRLERQYRQAAEALSANSAPFLKETRYV HHHHHHHHHHHHHHHHHCCCCCCCHHHCCCC >Mature Secondary Structure PLPPLFANLRLPVIASPLFIISCPELVIAQCKAGIVGSFPSLNARPISQLDEWLHQITE CCCCCHHCCCCHHHHCCCCEEECHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHH ELAAHNRANPDRPAAPFAVNQIVHKTNNRLDEDMALCAKWQVPMLITSLGAREDVYNAAH HHHHCCCCCCCCCCCCHHHHHHHHHHCCCHHHHHHHHHHCCHHHHHHHHCCHHHHHHHHC GWGGIVLHDVINDRFARKAIEKGADGLIPVAAGAGGHAGAQSPFALMQEIREWFDGLVAL CCCCHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHH SGAIAHGQSILAAQALGADFAYIGSAWIATEEANANAAYKQAIVDSRADDIVYSNLFTGV HHHHHHHHHHHHHHHHCCCHHHHCCHHEEECCCCCHHHHHHHHHHCCHHHHHHHHHHHCC HGNYLRSSIVNAGLDPENLPESDPSKMNFGSGGNTDAKAWKDIWGSGQGIGAVSAIEPVA CHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCHHHHHHHHH TRVDRLERQYRQAAEALSANSAPFLKETRYV HHHHHHHHHHHHHHHHHCCCCCCCHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA