| Definition | Novosphingobium aromaticivorans DSM 12444 chromosome, complete genome. |
|---|---|
| Accession | NC_007794 |
| Length | 3,561,584 |
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The map label for this gene is 87200282
Identifier: 87200282
GI number: 87200282
Start: 2407965
End: 2409011
Strand: Direct
Name: 87200282
Synonym: Saro_2268
Alternate gene names: NA
Gene position: 2407965-2409011 (Clockwise)
Preceding gene: 87200281
Following gene: 87200283
Centisome position: 67.61
GC content: 66.57
Gene sequence:
>1047_bases ATGGCCGAAGAAGCGATTCTCGAACCCGATCTGCCGATCATCGACCCGCACCACCACCTGTGGGACCTGCGCCCGCTGAT CGCCTCGTTTCCCGAGCCGCGCCATCCCTTCATCGAGACGCTGACCCACTCGGCCTACTACACCTTCGACCAATTGCTCG CCGACGCGCGCGGCGGGCACAACGTGGTGGCGACGGTCTACATGGAATGCGGCGCATTCTACCGCGCCGGCGCGGAAGCG GCCATGAAGCCGGTCGGCGAAGTCGAATTCGTGAACGGCGTTGCGGCCCAGGGCGCGAGCGGCCTCTACGGCGATTTCCG CCCCTGTGCCGCCATCATCGGCCATGCCGACCTGCAACTGGGCGACGGCGCGCGCCCGGTCCTCGAAGCCCTGTCAGAGG TGGGCAATGGCCGCTTCCGGGGAATCCGCCACCAGGGCGCTTGGGACGCCAATCCGGATGTCCTCGGCCCGCCTTTCCAC GCCCCGCCCCGGCTCTACCTGTCGGATGAATTTCGCAAGGGCTTCAGGCATCTGGGCGAACTGGGCCTCACCTTCGATGC CTGGCTGCTCGAACCGCAATTGTCCGACGTGCTCGATCTCGCCCGCGCATTTCCCGACCAGCCGATCTGCCTCGACCATT GCGGCACGCCACTCGGCACGTCCAGCTATCACGGCAAGCTGCACGAACGCTTCGAAGGGTGGCGCACCTCGATCCGCGCG ATCGCGCAGTGCCCCAACGTGACGGTCAAGCTTGGCGGCCTCGCCATGGCGTTCTGCGGCCTGCCCGAAGAGGGACCGAT GGCTGGCCTTTCGTCCGAAACGCTCGCCGCGATGTGGCGCCCCTACATCGAGACCTGCATCGAGGCCTTCGGGCCCGAGC GCGCGATGTTCGAAAGCAATTATCCGGTCGACAAGTGGGGCGCGAGCTACAACGTGCTGTGGAACGCCTTCAAGCGCCTT GCACATGGCGCATCCGATGCCGAAAAGCGCGCCCTCTTCGCGGGCACCGCGGCGCGGTTCTACGGGCTGGAGGACCTGCT GGCCTGA
Upstream 100 bases:
>100_bases GGCCGCCCGTTCAATCAAGCGATTAGAACCTGCTTGATACGGTCGCGTCATGCGCCATAGTCCCCCCACGCCCGCAAGAG GCGCGCAATGGGACAGGACA
Downstream 100 bases:
>100_bases CCAGCTTTGACAAGCTGCCCGGCATGATCTAGCCATTTTAACCATTCGATTAAACACACCTTCAAGGACCCGAGCCGAAT GCCCCTGCCCCCGCTATTCG
Product: amidohydrolase 2
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 348; Mature: 347
Protein sequence:
>348_residues MAEEAILEPDLPIIDPHHHLWDLRPLIASFPEPRHPFIETLTHSAYYTFDQLLADARGGHNVVATVYMECGAFYRAGAEA AMKPVGEVEFVNGVAAQGASGLYGDFRPCAAIIGHADLQLGDGARPVLEALSEVGNGRFRGIRHQGAWDANPDVLGPPFH APPRLYLSDEFRKGFRHLGELGLTFDAWLLEPQLSDVLDLARAFPDQPICLDHCGTPLGTSSYHGKLHERFEGWRTSIRA IAQCPNVTVKLGGLAMAFCGLPEEGPMAGLSSETLAAMWRPYIETCIEAFGPERAMFESNYPVDKWGASYNVLWNAFKRL AHGASDAEKRALFAGTAARFYGLEDLLA
Sequences:
>Translated_348_residues MAEEAILEPDLPIIDPHHHLWDLRPLIASFPEPRHPFIETLTHSAYYTFDQLLADARGGHNVVATVYMECGAFYRAGAEA AMKPVGEVEFVNGVAAQGASGLYGDFRPCAAIIGHADLQLGDGARPVLEALSEVGNGRFRGIRHQGAWDANPDVLGPPFH APPRLYLSDEFRKGFRHLGELGLTFDAWLLEPQLSDVLDLARAFPDQPICLDHCGTPLGTSSYHGKLHERFEGWRTSIRA IAQCPNVTVKLGGLAMAFCGLPEEGPMAGLSSETLAAMWRPYIETCIEAFGPERAMFESNYPVDKWGASYNVLWNAFKRL AHGASDAEKRALFAGTAARFYGLEDLLA >Mature_347_residues AEEAILEPDLPIIDPHHHLWDLRPLIASFPEPRHPFIETLTHSAYYTFDQLLADARGGHNVVATVYMECGAFYRAGAEAA MKPVGEVEFVNGVAAQGASGLYGDFRPCAAIIGHADLQLGDGARPVLEALSEVGNGRFRGIRHQGAWDANPDVLGPPFHA PPRLYLSDEFRKGFRHLGELGLTFDAWLLEPQLSDVLDLARAFPDQPICLDHCGTPLGTSSYHGKLHERFEGWRTSIRAI AQCPNVTVKLGGLAMAFCGLPEEGPMAGLSSETLAAMWRPYIETCIEAFGPERAMFESNYPVDKWGASYNVLWNAFKRLA HGASDAEKRALFAGTAARFYGLEDLLA
Specific function: Unknown
COG id: COG3618
COG function: function code R; Predicted metal-dependent hydrolase of the TIM-barrel fold
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR006992 [H]
Pfam domain/function: PF04909 Amidohydro_2 [H]
EC number: NA
Molecular weight: Translated: 38132; Mature: 38000
Theoretical pI: Translated: 5.21; Mature: 5.21
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.0 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 2.0 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAEEAILEPDLPIIDPHHHLWDLRPLIASFPEPRHPFIETLTHSAYYTFDQLLADARGGH CCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCC NVVATVYMECGAFYRAGAEAAMKPVGEVEFVNGVAAQGASGLYGDFRPCAAIIGHADLQL CHHHHHHHHHHHHHHCCHHHHHCCCCCHHHHHHHHHCCCCCCCCCHHHHHHHHCCCCCCC GDGARPVLEALSEVGNGRFRGIRHQGAWDANPDVLGPPFHAPPRLYLSDEFRKGFRHLGE CCCCHHHHHHHHHHCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCEECHHHHHHHHHHHH LGLTFDAWLLEPQLSDVLDLARAFPDQPICLDHCGTPLGTSSYHGKLHERFEGWRTSIRA HCCCHHHHCCCHHHHHHHHHHHHCCCCCEEHHHCCCCCCCCCHHHHHHHHHHHHHHHHHH IAQCPNVTVKLGGLAMAFCGLPEEGPMAGLSSETLAAMWRPYIETCIEAFGPERAMFESN HHHCCCCEEEECHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHCCC YPVDKWGASYNVLWNAFKRLAHGASDAEKRALFAGTAARFYGLEDLLA CCHHHHCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCHHHHHC >Mature Secondary Structure AEEAILEPDLPIIDPHHHLWDLRPLIASFPEPRHPFIETLTHSAYYTFDQLLADARGGH CCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCC NVVATVYMECGAFYRAGAEAAMKPVGEVEFVNGVAAQGASGLYGDFRPCAAIIGHADLQL CHHHHHHHHHHHHHHCCHHHHHCCCCCHHHHHHHHHCCCCCCCCCHHHHHHHHCCCCCCC GDGARPVLEALSEVGNGRFRGIRHQGAWDANPDVLGPPFHAPPRLYLSDEFRKGFRHLGE CCCCHHHHHHHHHHCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCEECHHHHHHHHHHHH LGLTFDAWLLEPQLSDVLDLARAFPDQPICLDHCGTPLGTSSYHGKLHERFEGWRTSIRA HCCCHHHHCCCHHHHHHHHHHHHCCCCCEEHHHCCCCCCCCCHHHHHHHHHHHHHHHHHH IAQCPNVTVKLGGLAMAFCGLPEEGPMAGLSSETLAAMWRPYIETCIEAFGPERAMFESN HHHCCCCEEEECHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHCCC YPVDKWGASYNVLWNAFKRLAHGASDAEKRALFAGTAARFYGLEDLLA CCHHHHCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCHHHHHC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9163424 [H]