| Definition | Novosphingobium aromaticivorans DSM 12444 chromosome, complete genome. |
|---|---|
| Accession | NC_007794 |
| Length | 3,561,584 |
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The map label for this gene is ilvH
Identifier: 87200276
GI number: 87200276
Start: 2401871
End: 2402389
Strand: Direct
Name: ilvH
Synonym: Saro_2262
Alternate gene names: 87200276
Gene position: 2401871-2402389 (Clockwise)
Preceding gene: 87200275
Following gene: 87200277
Centisome position: 67.44
GC content: 66.47
Gene sequence:
>519_bases ATGATGCACATCGCTCAGGAGGCGCAGGAGCGCCACGTCCTCACCATCACTGTCGACAACGAGGCAGGCATCCTCGCCAA GATCGCCGGGCTCTTCACCGCGCGCGGCTATAATATCGACAGCCTGACCGTGGCCGACATCACAGACGGCCACGACGTCA GCCGCATCACCATCGTGACGCACGGCCCGCCGCCGATCATCGACCAGATCCGCGCGCAGCTCGAACGACTCGTGCCGGTC CACAAGGTCACCGACCTCACCGAAGTCGGCCCCTTCGTCGAGCGCGAGCTGGCCCTGATCAAGGTCTCGGGCAAGGGCGA GAACCGCGTCGAGGCGCTGCGCCTCGCCGACGTGTTCCGCGCCAAGGTGGTCGACACCACGACCTCCAGCTTCATCTTCG AGCTGACCGGCGCGCCGGACAAGATCGACAGCTTCGTCTCGCTGATGAAGGAGCTTGGCCTCGTCGAGGTCGGCCGCACC GGCATCGTCGGCATGATCCGCGGCGCCACCGCCGCCTGA
Upstream 100 bases:
>100_bases CGTCGGGGGCTGCGCACACCGACATGATCCTCTACGGGGACGAAGTCGCCGGCACGATGGACGACGAAGCCAAGGCGCTG GTCTGAAGGACACCGGAACA
Downstream 100 bases:
>100_bases ATTGACTGGATACTCGAACAAGCAACCAACCGGAGCAACACCCACTCGTCACCCTGAACTCGCTTCAGGGTCCATGTGTC GGTAAGCACTGCCTTTTTCT
Product: acetolactate synthase 3 regulatory subunit
Products: NA
Alternate protein names: Acetohydroxy-acid synthase small subunit; AHAS; ALS [H]
Number of amino acids: Translated: 172; Mature: 172
Protein sequence:
>172_residues MMHIAQEAQERHVLTITVDNEAGILAKIAGLFTARGYNIDSLTVADITDGHDVSRITIVTHGPPPIIDQIRAQLERLVPV HKVTDLTEVGPFVERELALIKVSGKGENRVEALRLADVFRAKVVDTTTSSFIFELTGAPDKIDSFVSLMKELGLVEVGRT GIVGMIRGATAA
Sequences:
>Translated_172_residues MMHIAQEAQERHVLTITVDNEAGILAKIAGLFTARGYNIDSLTVADITDGHDVSRITIVTHGPPPIIDQIRAQLERLVPV HKVTDLTEVGPFVERELALIKVSGKGENRVEALRLADVFRAKVVDTTTSSFIFELTGAPDKIDSFVSLMKELGLVEVGRT GIVGMIRGATAA >Mature_172_residues MMHIAQEAQERHVLTITVDNEAGILAKIAGLFTARGYNIDSLTVADITDGHDVSRITIVTHGPPPIIDQIRAQLERLVPV HKVTDLTEVGPFVERELALIKVSGKGENRVEALRLADVFRAKVVDTTTSSFIFELTGAPDKIDSFVSLMKELGLVEVGRT GIVGMIRGATAA
Specific function: Valine and isoleucine biosynthesis; first step. [C]
COG id: COG0440
COG function: function code E; Acetolactate synthase, small (regulatory) subunit
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 ACT domain [H]
Homologues:
Organism=Escherichia coli, GI1786266, Length=159, Percent_Identity=41.5094339622642, Blast_Score=128, Evalue=2e-31, Organism=Saccharomyces cerevisiae, GI6319837, Length=212, Percent_Identity=29.2452830188679, Blast_Score=100, Evalue=1e-22,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004789 - InterPro: IPR019455 - InterPro: IPR002912 [H]
Pfam domain/function: PF01842 ACT; PF10369 ALS_ss_C [H]
EC number: =2.2.1.6 [H]
Molecular weight: Translated: 18597; Mature: 18597
Theoretical pI: Translated: 5.61; Mature: 5.61
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MMHIAQEAQERHVLTITVDNEAGILAKIAGLFTARGYNIDSLTVADITDGHDVSRITIVT CCCCHHHHCCCEEEEEEECCCCCHHHHHHHHHHHCCCCCCCEEEEECCCCCCCEEEEEEE HGPPPIIDQIRAQLERLVPVHKVTDLTEVGPFVERELALIKVSGKGENRVEALRLADVFR CCCCCHHHHHHHHHHHHCCHHHHHCHHHHCCHHHCEEEEEEEECCCCCHHHHHHHHHHHH AKVVDTTTSSFIFELTGAPDKIDSFVSLMKELGLVEVGRTGIVGMIRGATAA HHHHCCCCCEEEEEECCCCHHHHHHHHHHHHCCEEEECCCCEEEEECCCCCC >Mature Secondary Structure MMHIAQEAQERHVLTITVDNEAGILAKIAGLFTARGYNIDSLTVADITDGHDVSRITIVT CCCCHHHHCCCEEEEEEECCCCCHHHHHHHHHHHCCCCCCCEEEEECCCCCCCEEEEEEE HGPPPIIDQIRAQLERLVPVHKVTDLTEVGPFVERELALIKVSGKGENRVEALRLADVFR CCCCCHHHHHHHHHHHHCCHHHHHCHHHHCCHHHCEEEEEEEECCCCCHHHHHHHHHHHH AKVVDTTTSSFIFELTGAPDKIDSFVSLMKELGLVEVGRTGIVGMIRGATAA HHHHCCCCCEEEEEECCCCHHHHHHHHHHHHCCEEEECCCCEEEEECCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9389475 [H]