| Definition | Novosphingobium aromaticivorans DSM 12444 chromosome, complete genome. |
|---|---|
| Accession | NC_007794 |
| Length | 3,561,584 |
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The map label for this gene is ilvC
Identifier: 87200277
GI number: 87200277
Start: 2402566
End: 2403585
Strand: Direct
Name: ilvC
Synonym: Saro_2263
Alternate gene names: 87200277
Gene position: 2402566-2403585 (Clockwise)
Preceding gene: 87200276
Following gene: 87200278
Centisome position: 67.46
GC content: 63.92
Gene sequence:
>1020_bases ATGAAAGTCTATTACGACGCAGACTGCGATCTGAACCTCATCACGGACAAGAAGATCGCCATTCTCGGCTACGGCTCGCA GGGCCACGCCCACGCGCAGAACCTGCGCGATTCGGGCGTCAAGGACGTGGCCATCGCGCTGCGCCCCGGTTCGGCCAGCG CCAAGAAGGCCGAAGCCGCCGGCTTCAAGGTCCTCGCCAACGCCGATGCCGCCGCCTGGGCCGACATCCTCATGATCCTT GCGCCGGACGAGCACCAGGCCGCAATCTATGCCGATGACCTGCACGCCAACATGAAGCCGGGCGCCGCGCTTGCCTTCGC GCACGGCCTCAACATCCACTTCGGCCTGATCGAGGCGCGCGCCGACATCGACGTGATCATGATCGCGCCGAAGGGCCCGG GCCACACCGTCCGCTCGGAATATCAGCGTGGCGGCGGCGTGCCCTGCCTGATCGCCGTCCATCAGAACGTGACCGGCAAC GCCCACGACGTCGCTCTTGCCTATGCCTCGGGCGTCGGCGGTGGCCGTTCGGGCATCATCGAAACCAACTTCCGCGAGGA ATGCGAAACCGACCTGTTCGGCGAGCAGGTCGTGCTGTGCGGTGGCACCACCGCCCTGATCCAGGCCGGTTTCGAAACGC TGGTCGAAGCCGGCTACGCGCCGGAAATGGCCTACTTCGAATGCCTCCACGAACTGAAGCTGATCGTCGACCTGCTTTAT GAAGGCGGCATCGCCAACATGCGCTACTCGATCTCGAACACTGCCGAATACGGCGACATCAAGACGGGTCCGCGCATCAT CACCGAAGAGACCAAGAAGGAAATGAAGCGCGTCCTCGCCGACATCCAGGAAGGTCGCTTCGTCAAGGACTTCGTGCTCG ACAACCGCGCCGGCCAGCCCGAACTCAAGGCTGCCCGCGGTCTCGCCAAGCGCCACCAGATCGAGGAAACCGGCGCCAAG CTGCGCGCCATGATGCCCTGGATCGGCGCTAACAAGCTCGTGGACCAGACCAAGAACTGA
Upstream 100 bases:
>100_bases TGTCGGTAAGCACTGCCTTTTTCTGGCGAGAACTGCGTACGCGACAAGATGGATGCTGAAACAGGTTCAGCATGACGATC AGGACAAGAGGGAAAACACC
Downstream 100 bases:
>100_bases TCGCAAGCATTTGAATTTGGCGACTCTTTACGGGTCGTCAAATTCCACCAACGGCCGCGCACAATCGACGAAAGCAGTGG ACGCCACCGTATTGGACGCT
Product: ketol-acid reductoisomerase
Products: NA
Alternate protein names: Acetohydroxy-acid isomeroreductase; Alpha-keto-beta-hydroxylacil reductoisomerase
Number of amino acids: Translated: 339; Mature: 339
Protein sequence:
>339_residues MKVYYDADCDLNLITDKKIAILGYGSQGHAHAQNLRDSGVKDVAIALRPGSASAKKAEAAGFKVLANADAAAWADILMIL APDEHQAAIYADDLHANMKPGAALAFAHGLNIHFGLIEARADIDVIMIAPKGPGHTVRSEYQRGGGVPCLIAVHQNVTGN AHDVALAYASGVGGGRSGIIETNFREECETDLFGEQVVLCGGTTALIQAGFETLVEAGYAPEMAYFECLHELKLIVDLLY EGGIANMRYSISNTAEYGDIKTGPRIITEETKKEMKRVLADIQEGRFVKDFVLDNRAGQPELKAARGLAKRHQIEETGAK LRAMMPWIGANKLVDQTKN
Sequences:
>Translated_339_residues MKVYYDADCDLNLITDKKIAILGYGSQGHAHAQNLRDSGVKDVAIALRPGSASAKKAEAAGFKVLANADAAAWADILMIL APDEHQAAIYADDLHANMKPGAALAFAHGLNIHFGLIEARADIDVIMIAPKGPGHTVRSEYQRGGGVPCLIAVHQNVTGN AHDVALAYASGVGGGRSGIIETNFREECETDLFGEQVVLCGGTTALIQAGFETLVEAGYAPEMAYFECLHELKLIVDLLY EGGIANMRYSISNTAEYGDIKTGPRIITEETKKEMKRVLADIQEGRFVKDFVLDNRAGQPELKAARGLAKRHQIEETGAK LRAMMPWIGANKLVDQTKN >Mature_339_residues MKVYYDADCDLNLITDKKIAILGYGSQGHAHAQNLRDSGVKDVAIALRPGSASAKKAEAAGFKVLANADAAAWADILMIL APDEHQAAIYADDLHANMKPGAALAFAHGLNIHFGLIEARADIDVIMIAPKGPGHTVRSEYQRGGGVPCLIAVHQNVTGN AHDVALAYASGVGGGRSGIIETNFREECETDLFGEQVVLCGGTTALIQAGFETLVEAGYAPEMAYFECLHELKLIVDLLY EGGIANMRYSISNTAEYGDIKTGPRIITEETKKEMKRVLADIQEGRFVKDFVLDNRAGQPELKAARGLAKRHQIEETGAK LRAMMPWIGANKLVDQTKN
Specific function: Valine and isoleucine biosynthesis; second step. [C]
COG id: COG0059
COG function: function code EH; Ketol-acid reductoisomerase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the ketol-acid reductoisomerase family
Homologues:
Organism=Escherichia coli, GI1790210, Length=295, Percent_Identity=38.3050847457627, Blast_Score=153, Evalue=2e-38, Organism=Saccharomyces cerevisiae, GI6323387, Length=344, Percent_Identity=30.5232558139535, Blast_Score=112, Evalue=7e-26,
Paralogues:
None
Copy number: 160 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 1420 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 480 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). [C]
Swissprot (AC and ID): ILVC_NOVAD (Q2G623)
Other databases:
- EMBL: CP000248 - RefSeq: YP_497534.1 - ProteinModelPortal: Q2G623 - SMR: Q2G623 - STRING: Q2G623 - GeneID: 3916579 - GenomeReviews: CP000248_GR - KEGG: nar:Saro_2263 - NMPDR: fig|48935.1.peg.1744 - eggNOG: COG0059 - HOGENOM: HBG286525 - OMA: MAYAKGI - PhylomeDB: Q2G623 - ProtClustDB: PRK05479 - BioCyc: NARO279238:SARO_2263-MONOMER - HAMAP: MF_00435 - InterPro: IPR008927 - InterPro: IPR013023 - InterPro: IPR000506 - InterPro: IPR013328 - InterPro: IPR013116 - Gene3D: G3DSA:1.10.1040.10 - PANTHER: PTHR21371 - TIGRFAMs: TIGR00465
Pfam domain/function: PF01450 IlvC; PF07991 IlvN; SSF48179 6DGDH_C_like
EC number: =1.1.1.86
Molecular weight: Translated: 36488; Mature: 36488
Theoretical pI: Translated: 5.96; Mature: 5.96
Prosite motif: NA
Important sites: ACT_SITE 108-108
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 4.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKVYYDADCDLNLITDKKIAILGYGSQGHAHAQNLRDSGVKDVAIALRPGSASAKKAEAA CEEEECCCCCEEEEECCEEEEEEECCCCCHHHHHHHHCCCCEEEEEEECCCCCCCHHHHC GFKVLANADAAAWADILMILAPDEHQAAIYADDLHANMKPGAALAFAHGLNIHFGLIEAR CEEEEECCCHHHHEEEEEEECCCCCCEEEEEECCCCCCCCCEEEEEECCCEEEEEEEEEC ADIDVIMIAPKGPGHTVRSEYQRGGGVPCLIAVHQNVTGNAHDVALAYASGVGGGRSGII CCEEEEEECCCCCCCHHHHHHHHCCCCEEEEEEECCCCCCCCEEEEEEECCCCCCCCCEE ETNFREECETDLFGEQVVLCGGTTALIQAGFETLVEAGYAPEMAYFECLHELKLIVDLLY ECCCHHHHHHHHCCCEEEEECCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHH EGGIANMRYSISNTAEYGDIKTGPRIITEETKKEMKRVLADIQEGRFVKDFVLDNRAGQP CCCCCEEEEEECCCCCCCCCCCCCEEEHHHHHHHHHHHHHHHHCCCEEEHHHHCCCCCCC ELKAARGLAKRHQIEETGAKLRAMMPWIGANKLVDQTKN HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHCCCC >Mature Secondary Structure MKVYYDADCDLNLITDKKIAILGYGSQGHAHAQNLRDSGVKDVAIALRPGSASAKKAEAA CEEEECCCCCEEEEECCEEEEEEECCCCCHHHHHHHHCCCCEEEEEEECCCCCCCHHHHC GFKVLANADAAAWADILMILAPDEHQAAIYADDLHANMKPGAALAFAHGLNIHFGLIEAR CEEEEECCCHHHHEEEEEEECCCCCCEEEEEECCCCCCCCCEEEEEECCCEEEEEEEEEC ADIDVIMIAPKGPGHTVRSEYQRGGGVPCLIAVHQNVTGNAHDVALAYASGVGGGRSGII CCEEEEEECCCCCCCHHHHHHHHCCCCEEEEEEECCCCCCCCEEEEEEECCCCCCCCCEE ETNFREECETDLFGEQVVLCGGTTALIQAGFETLVEAGYAPEMAYFECLHELKLIVDLLY ECCCHHHHHHHHCCCEEEEECCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHH EGGIANMRYSISNTAEYGDIKTGPRIITEETKKEMKRVLADIQEGRFVKDFVLDNRAGQP CCCCCEEEEEECCCCCCCCCCCCCEEEHHHHHHHHHHHHHHHHCCCEEEHHHHCCCCCCC ELKAARGLAKRHQIEETGAKLRAMMPWIGANKLVDQTKN HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA