Definition Novosphingobium aromaticivorans DSM 12444 chromosome, complete genome.
Accession NC_007794
Length 3,561,584

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The map label for this gene is 87200272

Identifier: 87200272

GI number: 87200272

Start: 2397437

End: 2398069

Strand: Direct

Name: 87200272

Synonym: Saro_2258

Alternate gene names: NA

Gene position: 2397437-2398069 (Clockwise)

Preceding gene: 87200270

Following gene: 87200274

Centisome position: 67.31

GC content: 66.98

Gene sequence:

>633_bases
ATGTTAGCCTCGGCCCAAGGGGTGCGCCTGACGGGGGAAGAAGGCGATATGACCAGCAAATGGCCTACCATGCTCGGCGC
GGTCGCGGGGGCTGCCGCACTTGGCGCGGGCCTTCAGGTCGGGGGCACCGGGCTCGAAGGGTGGCACCTGGCCGCGCGAT
GGACGGCGCGGATCGGCTTTCCGATCTTCCTGATAACTTATGCCGCCTCGTCCTTCGCAAGGCTTTCGCCAGCGCCGTGG
AGCCGCGGCCTCGTGCGCGACCGGCGTTGGTGGGGCCTCGGCTTTGCCGCGAGCCATACGATCCACCTCTTCGCCCTGAT
CGTGGCGCTGCGCCTTGATCCCGAGCCGCGTACGCTCGTCTCGCTCATTCCCGGCGGGATCGCCTATGCGTTCATCTTCG
CGATGGCCCTTACATCGAACGACGCTGCCATGCGCACGCTGGGGCGCAACTGGAAGCGGCTTCATACCTTAGGCATCCAC
GTGATCTGGCTGATCTTCACGCTTGCCTATGCAAAGCGCATTCCGCTGGCCGAATCGCGGGCCATAGCGGTGCCCATGAC
CCTGCTCGCACTGGCCGCGCTGGGCTTGCGCGTACTTGCCCGTCGCCCTCGCCGCGCCGCTGGGCTCGCCTGA

Upstream 100 bases:

>100_bases
GGTCATTGCATTCACGGCGTGTTCTCCCACTTGCTATTCCTCAATATACTAACATTGGTGTAAATACCTCGTCAACACGG
CTGGCGGGAAAGCAGCAGTG

Downstream 100 bases:

>100_bases
TCAGTCGAACACCCAGTCCTCGCGGGCAATGCCCAGCAGCGAGAGAATGGACGTCAGGTCGCCCCGGTCGATCCAGCCAT
CCGCCGCCGCGCGGGCCTTG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 210; Mature: 210

Protein sequence:

>210_residues
MLASAQGVRLTGEEGDMTSKWPTMLGAVAGAAALGAGLQVGGTGLEGWHLAARWTARIGFPIFLITYAASSFARLSPAPW
SRGLVRDRRWWGLGFAASHTIHLFALIVALRLDPEPRTLVSLIPGGIAYAFIFAMALTSNDAAMRTLGRNWKRLHTLGIH
VIWLIFTLAYAKRIPLAESRAIAVPMTLLALAALGLRVLARRPRRAAGLA

Sequences:

>Translated_210_residues
MLASAQGVRLTGEEGDMTSKWPTMLGAVAGAAALGAGLQVGGTGLEGWHLAARWTARIGFPIFLITYAASSFARLSPAPW
SRGLVRDRRWWGLGFAASHTIHLFALIVALRLDPEPRTLVSLIPGGIAYAFIFAMALTSNDAAMRTLGRNWKRLHTLGIH
VIWLIFTLAYAKRIPLAESRAIAVPMTLLALAALGLRVLARRPRRAAGLA
>Mature_210_residues
MLASAQGVRLTGEEGDMTSKWPTMLGAVAGAAALGAGLQVGGTGLEGWHLAARWTARIGFPIFLITYAASSFARLSPAPW
SRGLVRDRRWWGLGFAASHTIHLFALIVALRLDPEPRTLVSLIPGGIAYAFIFAMALTSNDAAMRTLGRNWKRLHTLGIH
VIWLIFTLAYAKRIPLAESRAIAVPMTLLALAALGLRVLARRPRRAAGLA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 22602; Mature: 22602

Theoretical pI: Translated: 12.24; Mature: 12.24

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLASAQGVRLTGEEGDMTSKWPTMLGAVAGAAALGAGLQVGGTGLEGWHLAARWTARIGF
CCCCCCCCEEECCCCCCCHHHHHHHHHHHHHHHHCCCCEECCCCCCCHHHHHHHHHHCCC
PIFLITYAASSFARLSPAPWSRGLVRDRRWWGLGFAASHTIHLFALIVALRLDPEPRTLV
HHHHHHHHHHHHHHCCCCCCCCCCCCCCCEECCCHHHHHHHHHHHHHHHHHCCCCCHHHH
SLIPGGIAYAFIFAMALTSNDAAMRTLGRNWKRLHTLGIHVIWLIFTLAYAKRIPLAESR
HHHCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC
AIAVPMTLLALAALGLRVLARRPRRAAGLA
CHHHHHHHHHHHHHHHHHHHCCCCHHCCCC
>Mature Secondary Structure
MLASAQGVRLTGEEGDMTSKWPTMLGAVAGAAALGAGLQVGGTGLEGWHLAARWTARIGF
CCCCCCCCEEECCCCCCCHHHHHHHHHHHHHHHHCCCCEECCCCCCCHHHHHHHHHHCCC
PIFLITYAASSFARLSPAPWSRGLVRDRRWWGLGFAASHTIHLFALIVALRLDPEPRTLV
HHHHHHHHHHHHHHCCCCCCCCCCCCCCCEECCCHHHHHHHHHHHHHHHHHCCCCCHHHH
SLIPGGIAYAFIFAMALTSNDAAMRTLGRNWKRLHTLGIHVIWLIFTLAYAKRIPLAESR
HHHCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC
AIAVPMTLLALAALGLRVLARRPRRAAGLA
CHHHHHHHHHHHHHHHHHHHCCCCHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA