| Definition | Novosphingobium aromaticivorans DSM 12444 chromosome, complete genome. |
|---|---|
| Accession | NC_007794 |
| Length | 3,561,584 |
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The map label for this gene is purL
Identifier: 87200270
GI number: 87200270
Start: 2394320
End: 2396479
Strand: Direct
Name: purL
Synonym: Saro_2256
Alternate gene names: 87200270
Gene position: 2394320-2396479 (Clockwise)
Preceding gene: 87200269
Following gene: 87200272
Centisome position: 67.23
GC content: 66.11
Gene sequence:
>2160_bases ATGTCTCAGATCACTCCTGATGTCGTCGCCGCCCATGGGCTGTCCGAGGAAGAATACCAGCGCGTGCTGCACGCGCTCGG GCGCGAGCCGAACCTTGTCGAGCTCGGCATCTTCTCGGTCATGTGGTCGGAGCATTGCTCCTACAAGTCGAGCCGCATCC ACCTCAAGAAACTGCCGACTTCGGCCCCCTGGGTGATCTGCGGGCCCGGCGAGAACGCTGGCGTGATCGACATCGGCGAT GGCCAGGCCGCCATCTTCAAGATGGAGAGCCACAACCACCCGTCGTACATCGAACCCTACCAGGGCGCGGCGACGGGCGT CGGCGGCATCCTGCGCGACGTGTTCACGATGGGCGCCCGCCCGGTGGCGAACATGAACGCCCTGCGCTTCGGCCGCCCGG ATCACCCGAAGATGAAGCACCTCGTGCAGGGCGTCGTCGCGGGCATCGGCGGCTACGGCAACTGCGTCGGCGTGCCGACG GTGGGTGGCGAGACCAACTTCCACAAGGCCTATGACGGCAACATCCTCGTCAACGCGATGACCGTTGGCGTGGCGGACAC CGACAAGATCTTCTATTCGGCCGCCACCGGCCTCGGTAACCCGATCGTCTACGTCGGCTCCAAGACCGGGCGCGACGGCA TCCACGGCGCGACCATGGCCTCGGCCGACTTCGACGAGAAGTCCGACGAGAAGCGCCCGACCGTGCAGGTAGGCGACCCC TTCACCGAGAAGCTGCTGATCGAGGCCTGCCTCGAACTGATGGCGACCGACGCGATCGTGGCCATCCAGGACATGGGCGC TGCGGGCCTCACCTCGTCGTCGGTCGAAATGGCGACCAACGGCAAGGCCGGCATCATCCTCGACATGGACAAGGTGCCGT GCCGCGAAGAAGGCATGACGCCTTACGAGATGATGCTCTCGGAAAGCCAGGAGCGCATGCTCATGGTCCTGAAGCCCGGC AAGGAAGCCATGGCCGAAGCCATCTTCCGCAAGTGGGAGCTGGACTTCGCGGTGATCGGCGAAGTGACCGACACCGGCCA CATGGTCCTGAAGTTCCAGGGCGAAACCGTCTGCGACATTCCGCTCGGCCCCCTTGCCGAAGACGCCCCGCTCTATGACC GCCCCGCCCTTTCGCTGGCCGACTACAAGGCCTGGGCCAATGTCGCACCGCTCGGCACCGTGCCGGAAAGCACGGATCTT GGCGCGGATCTGGTGAAGCTGATCGGCTGCCCCGACCTCGCCAACCGCCGCTGGATCTTCGAGCAGTACGACAGCCAGGT CGGCGCCGACACGCTGCAGAAGTCCGGCGGAGATGCGGCGGTCGTGCGCATCCACGGCACCAGCAAGGCTCTCGCGATCA GCACCGACTGCACGCCGCGCTATTGCTATGCCGATCCCTATGAAGGCGGCAAGCAGGCCGTCGCGGAAACGTGGCGCAAC ATCTGCGCGGTGGGCGCGCGTCCGCTGGCGATCACCAATTGCCTCAACTTCGCCAACCCGCAGCGCCCCGAGATCATGGC CCAGATCGTCCAGGCGCTGAACGGCATGGGCGATGCGTGCCGCGCGCTGGATTACCCGATCGTCTCGGGCAACGTCTCGC TCTACAACGAATCGAAGGCCACCGGCGGCGGCTCGGCCATCCTGCCCACGCCCGCCATCGGCGGCGTCGGCCTGATGCTC GACCACGAAGTGATGACCACGGTCGCGTTCAAGGATGAAGGCGATGCGATCTGGCTGGTGGGCGGCGAAGGCACCCACCT TGGTCAGTCGCTCTACCTGCGCGAAATCCACGGCCGCGAGGATGGCGATGCACCGTCGGTCGATCTGGCGGTCGAGCGCA GGAACGGCGAGCAGGTCCGCGAATGGATCGCCGCCGGCAGGCTGAGCGCCGTGCACGATATTTCCGACGGTGGCCTTCTG GTCGCGCTGACCGAAATGGCGCTGGCCGGAAACAAGGGCTGCACCCTCGACATCGCCCTCACCACCGCCGCCGCATTCGG TGAAGACCAGTCGCGCTACGTCGTCACGACGCGGGCGGGCGAAGTGCTGGAAGGTGCGACCCGCCTCGGCACGGTCGGCG GCTCGCAGGTTGCAGGCGTCGAACTCGCCGCGCTGCGCGAAGCAAACGAGGCCTTCTTCCGCGACTGGATGGAAGGCTAA
Upstream 100 bases:
>100_bases GTTCGCCACGATGGTCGCCGCCACCGCCGCCACCTGGTTCACACTCAGGTTCGCCGGTTAGGACTAGCCTCTTGCGCGCC ACATCGCTAAGGCGCGCGCC
Downstream 100 bases:
>100_bases GCCAGGCCTTCATACCTGCGCCCCCCGAATGGCGGGGCGCAGGCCGGTCCTCCCGGTCAGGCCGCCAGTTTGGAGGCGTT CTTCCCCAGCAGGTCATAGG
Product: phosphoribosylformylglycinamidine synthase II
Products: NA
Alternate protein names: Phosphoribosylformylglycinamidine synthase II; FGAM synthase II
Number of amino acids: Translated: 719; Mature: 718
Protein sequence:
>719_residues MSQITPDVVAAHGLSEEEYQRVLHALGREPNLVELGIFSVMWSEHCSYKSSRIHLKKLPTSAPWVICGPGENAGVIDIGD GQAAIFKMESHNHPSYIEPYQGAATGVGGILRDVFTMGARPVANMNALRFGRPDHPKMKHLVQGVVAGIGGYGNCVGVPT VGGETNFHKAYDGNILVNAMTVGVADTDKIFYSAATGLGNPIVYVGSKTGRDGIHGATMASADFDEKSDEKRPTVQVGDP FTEKLLIEACLELMATDAIVAIQDMGAAGLTSSSVEMATNGKAGIILDMDKVPCREEGMTPYEMMLSESQERMLMVLKPG KEAMAEAIFRKWELDFAVIGEVTDTGHMVLKFQGETVCDIPLGPLAEDAPLYDRPALSLADYKAWANVAPLGTVPESTDL GADLVKLIGCPDLANRRWIFEQYDSQVGADTLQKSGGDAAVVRIHGTSKALAISTDCTPRYCYADPYEGGKQAVAETWRN ICAVGARPLAITNCLNFANPQRPEIMAQIVQALNGMGDACRALDYPIVSGNVSLYNESKATGGGSAILPTPAIGGVGLML DHEVMTTVAFKDEGDAIWLVGGEGTHLGQSLYLREIHGREDGDAPSVDLAVERRNGEQVREWIAAGRLSAVHDISDGGLL VALTEMALAGNKGCTLDIALTTAAAFGEDQSRYVVTTRAGEVLEGATRLGTVGGSQVAGVELAALREANEAFFRDWMEG
Sequences:
>Translated_719_residues MSQITPDVVAAHGLSEEEYQRVLHALGREPNLVELGIFSVMWSEHCSYKSSRIHLKKLPTSAPWVICGPGENAGVIDIGD GQAAIFKMESHNHPSYIEPYQGAATGVGGILRDVFTMGARPVANMNALRFGRPDHPKMKHLVQGVVAGIGGYGNCVGVPT VGGETNFHKAYDGNILVNAMTVGVADTDKIFYSAATGLGNPIVYVGSKTGRDGIHGATMASADFDEKSDEKRPTVQVGDP FTEKLLIEACLELMATDAIVAIQDMGAAGLTSSSVEMATNGKAGIILDMDKVPCREEGMTPYEMMLSESQERMLMVLKPG KEAMAEAIFRKWELDFAVIGEVTDTGHMVLKFQGETVCDIPLGPLAEDAPLYDRPALSLADYKAWANVAPLGTVPESTDL GADLVKLIGCPDLANRRWIFEQYDSQVGADTLQKSGGDAAVVRIHGTSKALAISTDCTPRYCYADPYEGGKQAVAETWRN ICAVGARPLAITNCLNFANPQRPEIMAQIVQALNGMGDACRALDYPIVSGNVSLYNESKATGGGSAILPTPAIGGVGLML DHEVMTTVAFKDEGDAIWLVGGEGTHLGQSLYLREIHGREDGDAPSVDLAVERRNGEQVREWIAAGRLSAVHDISDGGLL VALTEMALAGNKGCTLDIALTTAAAFGEDQSRYVVTTRAGEVLEGATRLGTVGGSQVAGVELAALREANEAFFRDWMEG >Mature_718_residues SQITPDVVAAHGLSEEEYQRVLHALGREPNLVELGIFSVMWSEHCSYKSSRIHLKKLPTSAPWVICGPGENAGVIDIGDG QAAIFKMESHNHPSYIEPYQGAATGVGGILRDVFTMGARPVANMNALRFGRPDHPKMKHLVQGVVAGIGGYGNCVGVPTV GGETNFHKAYDGNILVNAMTVGVADTDKIFYSAATGLGNPIVYVGSKTGRDGIHGATMASADFDEKSDEKRPTVQVGDPF TEKLLIEACLELMATDAIVAIQDMGAAGLTSSSVEMATNGKAGIILDMDKVPCREEGMTPYEMMLSESQERMLMVLKPGK EAMAEAIFRKWELDFAVIGEVTDTGHMVLKFQGETVCDIPLGPLAEDAPLYDRPALSLADYKAWANVAPLGTVPESTDLG ADLVKLIGCPDLANRRWIFEQYDSQVGADTLQKSGGDAAVVRIHGTSKALAISTDCTPRYCYADPYEGGKQAVAETWRNI CAVGARPLAITNCLNFANPQRPEIMAQIVQALNGMGDACRALDYPIVSGNVSLYNESKATGGGSAILPTPAIGGVGLMLD HEVMTTVAFKDEGDAIWLVGGEGTHLGQSLYLREIHGREDGDAPSVDLAVERRNGEQVREWIAAGRLSAVHDISDGGLLV ALTEMALAGNKGCTLDIALTTAAAFGEDQSRYVVTTRAGEVLEGATRLGTVGGSQVAGVELAALREANEAFFRDWMEG
Specific function: Unknown
COG id: COG0046
COG function: function code F; Phosphoribosylformylglycinamidine (FGAM) synthase, synthetase domain
Gene ontology:
Cell location: Cytoplasm
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the FGAMS family
Homologues:
Organism=Escherichia coli, GI48994899, Length=776, Percent_Identity=25.5154639175258, Blast_Score=134, Evalue=2e-32, Organism=Saccharomyces cerevisiae, GI6321498, Length=750, Percent_Identity=22.9333333333333, Blast_Score=111, Evalue=4e-25, Organism=Drosophila melanogaster, GI24582111, Length=656, Percent_Identity=23.780487804878, Blast_Score=99, Evalue=7e-21, Organism=Drosophila melanogaster, GI24582109, Length=656, Percent_Identity=23.780487804878, Blast_Score=99, Evalue=7e-21, Organism=Drosophila melanogaster, GI17137292, Length=656, Percent_Identity=23.780487804878, Blast_Score=99, Evalue=7e-21,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): PURL_NOVAD (Q2G630)
Other databases:
- EMBL: CP000248 - RefSeq: YP_497527.1 - ProteinModelPortal: Q2G630 - SMR: Q2G630 - STRING: Q2G630 - GeneID: 3916572 - GenomeReviews: CP000248_GR - KEGG: nar:Saro_2256 - NMPDR: fig|48935.1.peg.1737 - eggNOG: COG0046 - HOGENOM: HBG311214 - OMA: YGNSFGV - PhylomeDB: Q2G630 - ProtClustDB: PRK01213 - BioCyc: NARO279238:SARO_2256-MONOMER - GO: GO:0005737 - HAMAP: MF_00420 - InterPro: IPR000728 - InterPro: IPR010918 - InterPro: IPR010074 - InterPro: IPR016188 - TIGRFAMs: TIGR01736
Pfam domain/function: PF00586 AIRS; PF02769 AIRS_C; SSF56042 AIR_synth_C; SSF55326 PurM_N-like
EC number: =6.3.5.3
Molecular weight: Translated: 76495; Mature: 76363
Theoretical pI: Translated: 4.60; Mature: 4.60
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 3.5 %Met (Translated Protein) 5.3 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 3.3 %Met (Mature Protein) 5.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSQITPDVVAAHGLSEEEYQRVLHALGREPNLVELGIFSVMWSEHCSYKSSRIHLKKLPT CCCCCCHHHHHCCCCHHHHHHHHHHHCCCCCEEEHHHHHHHHHHHCCCCCCCEEEEECCC SAPWVICGPGENAGVIDIGDGQAAIFKMESHNHPSYIEPYQGAATGVGGILRDVFTMGAR CCCEEEECCCCCCCEEEECCCCEEEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHCCCC PVANMNALRFGRPDHPKMKHLVQGVVAGIGGYGNCVGVPTVGGETNFHKAYDGNILVNAM CCCCCCCEECCCCCCHHHHHHHHHHHHHCCCCCCEEECCCCCCCCCCCEECCCCEEEEEE TVGVADTDKIFYSAATGLGNPIVYVGSKTGRDGIHGATMASADFDEKSDEKRPTVQVGDP EECCCCCCHHHEEHHCCCCCCEEEECCCCCCCCCCCCEEECCCCCCCCCCCCCEEEECCC FTEKLLIEACLELMATDAIVAIQDMGAAGLTSSSVEMATNGKAGIILDMDKVPCREEGMT HHHHHHHHHHHHHHHCCCEEEEECCCCCCCCCCCEEEECCCCEEEEEECCCCCCCCCCCC PYEMMLSESQERMLMVLKPGKEAMAEAIFRKWELDFAVIGEVTDTGHMVLKFQGETVCDI HHHHHHCCCCCEEEEEECCCHHHHHHHHHHHHCCCEEEEEEECCCCEEEEEECCCEEEEC PLGPLAEDAPLYDRPALSLADYKAWANVAPLGTVPESTDLGADLVKLIGCPDLANRRWIF CCCCCCCCCCCCCCCCCCHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCHH EQYDSQVGADTLQKSGGDAAVVRIHGTSKALAISTDCTPRYCYADPYEGGKQAVAETWRN HHHHHHCCHHHHHHCCCCEEEEEEECCCCEEEEECCCCCCEEECCCCCCHHHHHHHHHHH ICAVGARPLAITNCLNFANPQRPEIMAQIVQALNGMGDACRALDYPIVSGNVSLYNESKA HHHCCCCCHHHHHHHHCCCCCCHHHHHHHHHHHCCCCHHHHHCCCCEEECCEEEEECCCC TGGGSAILPTPAIGGVGLMLDHEVMTTVAFKDEGDAIWLVGGEGTHLGQSLYLREIHGRE CCCCCEECCCCCCCCEEEEECHHEEEEEEEECCCCEEEEECCCCCCCCHHHHHHHHCCCC DGDAPSVDLAVERRNGEQVREWIAAGRLSAVHDISDGGLLVALTEMALAGNKGCTLDIAL CCCCCCEEEEEECCCCHHHHHHHHHCCCHHEEECCCCCEEEEEEHHHHCCCCCCEEEEEE TTAAAFGEDQSRYVVTTRAGEVLEGATRLGTVGGSQVAGVELAALREANEAFFRDWMEG EEHHHCCCCCCCEEEEECCCHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure SQITPDVVAAHGLSEEEYQRVLHALGREPNLVELGIFSVMWSEHCSYKSSRIHLKKLPT CCCCCHHHHHCCCCHHHHHHHHHHHCCCCCEEEHHHHHHHHHHHCCCCCCCEEEEECCC SAPWVICGPGENAGVIDIGDGQAAIFKMESHNHPSYIEPYQGAATGVGGILRDVFTMGAR CCCEEEECCCCCCCEEEECCCCEEEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHCCCC PVANMNALRFGRPDHPKMKHLVQGVVAGIGGYGNCVGVPTVGGETNFHKAYDGNILVNAM CCCCCCCEECCCCCCHHHHHHHHHHHHHCCCCCCEEECCCCCCCCCCCEECCCCEEEEEE TVGVADTDKIFYSAATGLGNPIVYVGSKTGRDGIHGATMASADFDEKSDEKRPTVQVGDP EECCCCCCHHHEEHHCCCCCCEEEECCCCCCCCCCCCEEECCCCCCCCCCCCCEEEECCC FTEKLLIEACLELMATDAIVAIQDMGAAGLTSSSVEMATNGKAGIILDMDKVPCREEGMT HHHHHHHHHHHHHHHCCCEEEEECCCCCCCCCCCEEEECCCCEEEEEECCCCCCCCCCCC PYEMMLSESQERMLMVLKPGKEAMAEAIFRKWELDFAVIGEVTDTGHMVLKFQGETVCDI HHHHHHCCCCCEEEEEECCCHHHHHHHHHHHHCCCEEEEEEECCCCEEEEEECCCEEEEC PLGPLAEDAPLYDRPALSLADYKAWANVAPLGTVPESTDLGADLVKLIGCPDLANRRWIF CCCCCCCCCCCCCCCCCCHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCHH EQYDSQVGADTLQKSGGDAAVVRIHGTSKALAISTDCTPRYCYADPYEGGKQAVAETWRN HHHHHHCCHHHHHHCCCCEEEEEEECCCCEEEEECCCCCCEEECCCCCCHHHHHHHHHHH ICAVGARPLAITNCLNFANPQRPEIMAQIVQALNGMGDACRALDYPIVSGNVSLYNESKA HHHCCCCCHHHHHHHHCCCCCCHHHHHHHHHHHCCCCHHHHHCCCCEEECCEEEEECCCC TGGGSAILPTPAIGGVGLMLDHEVMTTVAFKDEGDAIWLVGGEGTHLGQSLYLREIHGRE CCCCCEECCCCCCCCEEEEECHHEEEEEEEECCCCEEEEECCCCCCCCHHHHHHHHCCCC DGDAPSVDLAVERRNGEQVREWIAAGRLSAVHDISDGGLLVALTEMALAGNKGCTLDIAL CCCCCCEEEEEECCCCHHHHHHHHHCCCHHEEECCCCCEEEEEEHHHHCCCCCCEEEEEE TTAAAFGEDQSRYVVTTRAGEVLEGATRLGTVGGSQVAGVELAALREANEAFFRDWMEG EEHHHCCCCCCCEEEEECCCHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA