| Definition | Novosphingobium aromaticivorans DSM 12444 chromosome, complete genome. |
|---|---|
| Accession | NC_007794 |
| Length | 3,561,584 |
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The map label for this gene is 87200235
Identifier: 87200235
GI number: 87200235
Start: 2363361
End: 2364449
Strand: Reverse
Name: 87200235
Synonym: Saro_2220
Alternate gene names: NA
Gene position: 2364449-2363361 (Counterclockwise)
Preceding gene: 87200238
Following gene: 87200234
Centisome position: 66.39
GC content: 67.03
Gene sequence:
>1089_bases ATGGCTGATTTTCCGACGCGGCCCGACGAGGTCGACGCGGTCTGGCTCGAAGCGCGACTGGCCGATGCCGGCGTTCTGGA TGGTGCCCGGATCGTCAAGGTGGAATGGCAATCCATCGGCACCGGGCAGGTCGGCGATACCGCGCGCTTCTCTCTGACCT ATGATCGCCCGGCGCCGCTCGCGCCCGCCTCGGTGGCGGCCAAGTTTCCGTCAAGCGACCCGACAAGCCGGCAGACCGCC GCGTCGTTCTCGCTCTACAAGCGCGAGGTGAACTTCTACCGCGATGTCGCGGGCCTGATCGACATGCGCGTGCCTCGGGC CTACGCCGCCTTGCTCGACGACAACGGCTGCGATTTCGTGCTGCTGTTCGAGGATCTGGGGCCGTGCGAAGCGGGCAACC AGCTTTCCGGATGCGGGATCGACCAGGCGCGCGACGCGCTCCGGCAGGCGGCCGCTCTTCACGCCGCGACGCTGGACCAC CCGGTCCTCGACAGCGAATGGTTGCAGACCGACCCACAGGCCAGCGCCATGCTGCGCGCGCTCTATCCACAGGCGCAGGC CATCTTTCGCGAGCGCTATGCCGATGCGCTCGACCCGGCGCTCATGGCGATCTGCGACGAACTCGATGAATGCGCCGACC TCTGGTTCGACCGCAAGCCTGCCCGCCGCAGCTTCCTTCACGGCGATTTCCGCCTCGACAATATGCTGTTCGGCATCCGG GACGGGCAGGAGCCGATCGCGCTGGTAGACTGGCAGACGGCTGCAGTGGGATGCGGCCTTACCGACATCGGCTATTTCAT GGGCTGCGGCATCGGCTCCGGCCTGCGCCGCCCCCACGAGGCGGCCCTGCTCGACTTGTACTGCGCGGAGATGACGCGCC GCGGCGTTGCCATGACCCGTGACGAGATCATGGACGATTACCGCATCGGCGCGCTTCACGGCGTTTCGACCGCCGTGTTC AGTTCCGCCTTCGTCGTCCGCACCGAGCGGGGCGACGCCAATTTCCTCTCGATGGCGCGCGGCGCGTGCGAGCTTGCTCT CGAACACAACAGCCTCGGGGCCCTCAAGCGTCGGATGGAGAATGCGTGA
Upstream 100 bases:
>100_bases GAGCGGGTGTCGCGTTCCATCGCGTTGACCTGATCGGTCAATTGCTGGTCTCTTCCAATGCGGGACGCTCTCTGCCAGCC TGCGAGGTGGGAGAGACGAT
Downstream 100 bases:
>100_bases TGCTGAGCAAGGGTGACGATTTTCCGCTGCACCAGACGCCCGAACCGGTCGCCTATGCCGGGACCGACCGCAACTTCTAC GACCGCTACTTCTTCAACGG
Product: hypothetical protein
Products: NA
Alternate protein names: Phosphotransferase Family Protein; Conserved Domain Protein; Protein Kinase-Like Protein
Number of amino acids: Translated: 362; Mature: 361
Protein sequence:
>362_residues MADFPTRPDEVDAVWLEARLADAGVLDGARIVKVEWQSIGTGQVGDTARFSLTYDRPAPLAPASVAAKFPSSDPTSRQTA ASFSLYKREVNFYRDVAGLIDMRVPRAYAALLDDNGCDFVLLFEDLGPCEAGNQLSGCGIDQARDALRQAAALHAATLDH PVLDSEWLQTDPQASAMLRALYPQAQAIFRERYADALDPALMAICDELDECADLWFDRKPARRSFLHGDFRLDNMLFGIR DGQEPIALVDWQTAAVGCGLTDIGYFMGCGIGSGLRRPHEAALLDLYCAEMTRRGVAMTRDEIMDDYRIGALHGVSTAVF SSAFVVRTERGDANFLSMARGACELALEHNSLGALKRRMENA
Sequences:
>Translated_362_residues MADFPTRPDEVDAVWLEARLADAGVLDGARIVKVEWQSIGTGQVGDTARFSLTYDRPAPLAPASVAAKFPSSDPTSRQTA ASFSLYKREVNFYRDVAGLIDMRVPRAYAALLDDNGCDFVLLFEDLGPCEAGNQLSGCGIDQARDALRQAAALHAATLDH PVLDSEWLQTDPQASAMLRALYPQAQAIFRERYADALDPALMAICDELDECADLWFDRKPARRSFLHGDFRLDNMLFGIR DGQEPIALVDWQTAAVGCGLTDIGYFMGCGIGSGLRRPHEAALLDLYCAEMTRRGVAMTRDEIMDDYRIGALHGVSTAVF SSAFVVRTERGDANFLSMARGACELALEHNSLGALKRRMENA >Mature_361_residues ADFPTRPDEVDAVWLEARLADAGVLDGARIVKVEWQSIGTGQVGDTARFSLTYDRPAPLAPASVAAKFPSSDPTSRQTAA SFSLYKREVNFYRDVAGLIDMRVPRAYAALLDDNGCDFVLLFEDLGPCEAGNQLSGCGIDQARDALRQAAALHAATLDHP VLDSEWLQTDPQASAMLRALYPQAQAIFRERYADALDPALMAICDELDECADLWFDRKPARRSFLHGDFRLDNMLFGIRD GQEPIALVDWQTAAVGCGLTDIGYFMGCGIGSGLRRPHEAALLDLYCAEMTRRGVAMTRDEIMDDYRIGALHGVSTAVFS SAFVVRTERGDANFLSMARGACELALEHNSLGALKRRMENA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 39637; Mature: 39506
Theoretical pI: Translated: 4.56; Mature: 4.56
Prosite motif: PS00109 PROTEIN_KINASE_TYR
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.5 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 5.5 %Cys+Met (Translated Protein) 2.5 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 5.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MADFPTRPDEVDAVWLEARLADAGVLDGARIVKVEWQSIGTGQVGDTARFSLTYDRPAPL CCCCCCCCCCHHEEEEEHHHHCCCCCCCCEEEEEEECCCCCCCCCCCEEEEEEECCCCCC APASVAAKFPSSDPTSRQTAASFSLYKREVNFYRDVAGLIDMRVPRAYAALLDDNGCDFV CCHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHCCCCCCCEE LLFEDLGPCEAGNQLSGCGIDQARDALRQAAALHAATLDHPVLDSEWLQTDPQASAMLRA EEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCHHHCCCCHHHHHHHH LYPQAQAIFRERYADALDPALMAICDELDECADLWFDRKPARRSFLHGDFRLDNMLFGIR HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCCEEECCEEEEEC DGQEPIALVDWQTAAVGCGLTDIGYFMGCGIGSGLRRPHEAALLDLYCAEMTRRGVAMTR CCCCCEEEEECCHHHHCCCHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHCCCHHHH DEIMDDYRIGALHGVSTAVFSSAFVVRTERGDANFLSMARGACELALEHNSLGALKRRME HHHHHHHHHHHHHHHHHHHHCCEEEEEECCCCCHHHHHHCCHHHEEECCCHHHHHHHHHC NA CC >Mature Secondary Structure ADFPTRPDEVDAVWLEARLADAGVLDGARIVKVEWQSIGTGQVGDTARFSLTYDRPAPL CCCCCCCCCHHEEEEEHHHHCCCCCCCCEEEEEEECCCCCCCCCCCEEEEEEECCCCCC APASVAAKFPSSDPTSRQTAASFSLYKREVNFYRDVAGLIDMRVPRAYAALLDDNGCDFV CCHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHCCCCCCCEE LLFEDLGPCEAGNQLSGCGIDQARDALRQAAALHAATLDHPVLDSEWLQTDPQASAMLRA EEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCHHHCCCCHHHHHHHH LYPQAQAIFRERYADALDPALMAICDELDECADLWFDRKPARRSFLHGDFRLDNMLFGIR HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCCEEECCEEEEEC DGQEPIALVDWQTAAVGCGLTDIGYFMGCGIGSGLRRPHEAALLDLYCAEMTRRGVAMTR CCCCCEEEEECCHHHHCCCHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHCCCHHHH DEIMDDYRIGALHGVSTAVFSSAFVVRTERGDANFLSMARGACELALEHNSLGALKRRME HHHHHHHHHHHHHHHHHHHHCCEEEEEECCCCCHHHHHHCCHHHEEECCCHHHHHHHHHC NA CC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA