| Definition | Novosphingobium aromaticivorans DSM 12444 chromosome, complete genome. |
|---|---|
| Accession | NC_007794 |
| Length | 3,561,584 |
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The map label for this gene is 87200021
Identifier: 87200021
GI number: 87200021
Start: 2139629
End: 2140384
Strand: Reverse
Name: 87200021
Synonym: Saro_2005
Alternate gene names: NA
Gene position: 2140384-2139629 (Counterclockwise)
Preceding gene: 87200022
Following gene: 87200019
Centisome position: 60.1
GC content: 67.06
Gene sequence:
>756_bases ATGACCGGGATCGGTTCGAGGACGGTATGTGCGCGCGGCGCGCTGGTGGTTCTGGGCGTGATGGCGGCTGCGCCGTCGGT TCACGCGCAGTCGGTCGATGCCGGAGTTGAGGCCTCGACCGACGAAGTGCGGCGAGGCCTGAGCTGGAGCGACGGCGAGA TTTCGGCCTCGGCCGATGCCCTCGTTGGCTTCGGCGGTTTCGACGCGTCGGCCCGCGTATCGATGCTGCGCAAGTCGGAC CGCCATGCCAATGCGGACGTCGTGGCCGACCTCGCCCTGGGCCGGGACTGGGACCTGAGCGGCTTTACCGTGCGGACCGA GGCCATCGGCCACGTTTTCGGCGGCGCCGACGCCAGCATGGATTATGTCGAGCTTGGCCTCGGTGCCCGGTACTCCATCG GACCGTTGCAGGTCGGGGCAGGGGCCTTCTACGCGCCCAGCCAGGACGCCATAGGCGGCGACAATCTCTACCTCAGGGCC AGTGCGAACTTCGGGGTGCCGGCGCTGCCGGTCAGCCTTTCTGCCTCGGTCGGCCATACCACGGGCGACACGAAGGACGC CCGGTCTGCGCGGCTACGGCCACTGGGTGATTATACGGACTGGAAGCTGGGGGTCGAATACAACCAGTTCCCGTTCACGA TCGGCGTGGATTATGCGGGAACCGACGTCGACACGTCGCGGGTGCCACTGTCGCCATATGCCGACCTCAAGCATGCGGGC GACCGCGTGGTCGGCAGGGTCAGGCTTTCATTCTGA
Upstream 100 bases:
>100_bases GAGGCAATGATGGCTATCGTGGCGCAGGATCGGGATGCCATACTCGTTGATGCAGATGATGCGCGCCAGCGCACGAGGAC GGACAAGGAGGCATGACGGA
Downstream 100 bases:
>100_bases CGGGATTGGAACGGCCCCCGCGGGTGCGGGGGCCGGAACCGGTCAGAGGTTTTCGAGCATGTGCTCGGCCGAGCTGACCT TGAAGTCGCCCGGAGCTTCG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 251; Mature: 250
Protein sequence:
>251_residues MTGIGSRTVCARGALVVLGVMAAAPSVHAQSVDAGVEASTDEVRRGLSWSDGEISASADALVGFGGFDASARVSMLRKSD RHANADVVADLALGRDWDLSGFTVRTEAIGHVFGGADASMDYVELGLGARYSIGPLQVGAGAFYAPSQDAIGGDNLYLRA SANFGVPALPVSLSASVGHTTGDTKDARSARLRPLGDYTDWKLGVEYNQFPFTIGVDYAGTDVDTSRVPLSPYADLKHAG DRVVGRVRLSF
Sequences:
>Translated_251_residues MTGIGSRTVCARGALVVLGVMAAAPSVHAQSVDAGVEASTDEVRRGLSWSDGEISASADALVGFGGFDASARVSMLRKSD RHANADVVADLALGRDWDLSGFTVRTEAIGHVFGGADASMDYVELGLGARYSIGPLQVGAGAFYAPSQDAIGGDNLYLRA SANFGVPALPVSLSASVGHTTGDTKDARSARLRPLGDYTDWKLGVEYNQFPFTIGVDYAGTDVDTSRVPLSPYADLKHAG DRVVGRVRLSF >Mature_250_residues TGIGSRTVCARGALVVLGVMAAAPSVHAQSVDAGVEASTDEVRRGLSWSDGEISASADALVGFGGFDASARVSMLRKSDR HANADVVADLALGRDWDLSGFTVRTEAIGHVFGGADASMDYVELGLGARYSIGPLQVGAGAFYAPSQDAIGGDNLYLRAS ANFGVPALPVSLSASVGHTTGDTKDARSARLRPLGDYTDWKLGVEYNQFPFTIGVDYAGTDVDTSRVPLSPYADLKHAGD RVVGRVRLSF
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 26143; Mature: 26012
Theoretical pI: Translated: 5.05; Mature: 5.05
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 2.0 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 1.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTGIGSRTVCARGALVVLGVMAAAPSVHAQSVDAGVEASTDEVRRGLSWSDGEISASADA CCCCCCCHHHHCCHHHHHHHHHCCCCCCHHHCCCCCCCCHHHHHCCCCCCCCCCCCCCCE LVGFGGFDASARVSMLRKSDRHANADVVADLALGRDWDLSGFTVRTEAIGHVFGGADASM EEEECCCCHHHHHHHHHHCCCCCCCCEEEHHHCCCCCCCCCEEEEHHHHHHHHCCCCCCC DYVELGLGARYSIGPLQVGAGAFYAPSQDAIGGDNLYLRASANFGVPALPVSLSASVGHT CEEEECCCCCCCCCCEEECCCEEECCCCCCCCCCCEEEEEECCCCCCCCCEEEECCCCCC TGDTKDARSARLRPLGDYTDWKLGVEYNQFPFTIGVDYAGTDVDTSRVPLSPYADLKHAG CCCCCCCHHCCCCCCCCCCCEEECCEECCCCEEEECCCCCCCCCCCCCCCCCCHHHHHCC DRVVGRVRLSF CEEEEEEEECC >Mature Secondary Structure TGIGSRTVCARGALVVLGVMAAAPSVHAQSVDAGVEASTDEVRRGLSWSDGEISASADA CCCCCCHHHHCCHHHHHHHHHCCCCCCHHHCCCCCCCCHHHHHCCCCCCCCCCCCCCCE LVGFGGFDASARVSMLRKSDRHANADVVADLALGRDWDLSGFTVRTEAIGHVFGGADASM EEEECCCCHHHHHHHHHHCCCCCCCCEEEHHHCCCCCCCCCEEEEHHHHHHHHCCCCCCC DYVELGLGARYSIGPLQVGAGAFYAPSQDAIGGDNLYLRASANFGVPALPVSLSASVGHT CEEEECCCCCCCCCCEEECCCEEECCCCCCCCCCCEEEEEECCCCCCCCCEEEECCCCCC TGDTKDARSARLRPLGDYTDWKLGVEYNQFPFTIGVDYAGTDVDTSRVPLSPYADLKHAG CCCCCCCHHCCCCCCCCCCCEEECCEECCCCEEEECCCCCCCCCCCCCCCCCCHHHHHCC DRVVGRVRLSF CEEEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA