| Definition | Novosphingobium aromaticivorans DSM 12444 chromosome, complete genome. |
|---|---|
| Accession | NC_007794 |
| Length | 3,561,584 |
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The map label for this gene is ahcY
Identifier: 87200019
GI number: 87200019
Start: 2137479
End: 2138885
Strand: Reverse
Name: ahcY
Synonym: Saro_2003
Alternate gene names: 87200019
Gene position: 2138885-2137479 (Counterclockwise)
Preceding gene: 87200021
Following gene: 87200018
Centisome position: 60.05
GC content: 62.69
Gene sequence:
>1407_bases GTGGCCAGCGTGCTTGACGCCCAGAACGATTATGTTGTCGCCGACATCGGCCTTGCCGACTTCGGCCGCGCTGAAATCCG CATTGCGGAAACGGAAATGCCGGGCCTGATGGCCCTGCGCGAGGAGTTCGGCGCTTCGCAGCCGCTCAAGGGCGCGCGCA TCACCGGCTCGCTGCACATGACCATCCAGACCGCCGTGCTGATCGAGACCCTGGTCGCGCTGGGCGCCGAAGTGCGCTGG GCCACGTGCAACATCTTCTCCACGCAGGACCACGCCGCTGCCGCGATCGCCGCCGCCGGCATTCCGGTCTTCGCGGTGAA GGGCGAAAGCCTTGCCGAATACTGGGACTACGTCGGCTCGATCTTCGACTGGGGCGACCAGACCGCCAACATGATCCTCG ACGATGGCGGCGACGCCACGATGTTCGCCCTGTGGGGCGCGCGCGTCGAAGCCGGCGAGCCGCTGTTCGAACCCTCGAAC GCCGAGGAAATCGAATTCGTCCGCGCGCTCAAGGAATTCCTCAAGCGCAAGCCGGGCTACCTCACCATGTCCGTCGCCCA CATCAAGGGCGTTTCGGAAGAGACCACCACCGGCGTTCACCGCCTCTACCAGATCGCCAAGGACGGCAAGCTGCCGTTCC CAGCGATCAACGTGAACGACAGCGTTACCAAGTCGAAGTTCGACAACCTCTATGGCTGCAAGGAATCACTGGTCGACGCG ATCCGCCGCGCCACTGACGTGATGCTGGCCGGCAAGGTCGCATGCGTTGCCGGCTTCGGTGACGTGGGCAAGGGTTCGGC CGCATCGCTGCGCCAGGGCGGCGCGCGCGTGATGGTGACCGAGATCGATCCGATCTGCGCGCTCCAGGCCGCGATGGAAG GCTATGAAGTCGTCACGATGGAAGAAGCCGTCCAGCGCTGCGACATCTTCGTCACCGCCACCGGCAACGAAGACGTCATC ACCGCCGAGCACATGAAGGCGATGAAGCCGATGAGCATCGTCTGCAACATCGGCCACTTCGACAGCGAGATCCAGATCTC GGCGCTGAACAACTACAAGTGGACCGAGATCAAGCCGGGCACTGACCTGGTCGAGTTCCCCGACGGCAAGCAGATCATCA TCCTTGCCAAGGGACGTCTGGTGAACCTGGGCTGCGCCACCGGCCACCCGAGCTTCGTGATGTCCTCGTCGTTCACCAAC CAGGTGCTGGCTCAGATCGAGCTGTTCACCAAGAACGCCGAATACAAGAACGAAGTCTACGTCCTGCCCAAGCACCTCGA CGAAAAGGTCGCGGCGCTGCATCTCGAGAAGCTTGGCGTCAAGTTGACCAAGCTGAGCAAGAAGCAGGCGGACTATATCG GCGTTTCGCAGGAAGGTCCGTTCAAGCCGGATCACTACCGCTACTGA
Upstream 100 bases:
>100_bases AAGAAGTCTTTATATTAAGTTTGCACGTCGCGGCGCCCCGCGCTATGGGCAGCCGCAGGCGCGCTTGCCGCGCAGACCGA ACATTTCAGGAGACTGCCAC
Downstream 100 bases:
>100_bases GCGACCGTGCGGCGGGGCCTCGCGGTGTCGGGCCCAGCCTTTCGGCGACACATGGAAAGAGAGAGCCTCCGCCCGCGCGG GGGCTCTCTTTTCGTGTACA
Product: S-adenosyl-L-homocysteine hydrolase
Products: NA
Alternate protein names: S-adenosyl-L-homocysteine hydrolase; AdoHcyase
Number of amino acids: Translated: 468; Mature: 467
Protein sequence:
>468_residues MASVLDAQNDYVVADIGLADFGRAEIRIAETEMPGLMALREEFGASQPLKGARITGSLHMTIQTAVLIETLVALGAEVRW ATCNIFSTQDHAAAAIAAAGIPVFAVKGESLAEYWDYVGSIFDWGDQTANMILDDGGDATMFALWGARVEAGEPLFEPSN AEEIEFVRALKEFLKRKPGYLTMSVAHIKGVSEETTTGVHRLYQIAKDGKLPFPAINVNDSVTKSKFDNLYGCKESLVDA IRRATDVMLAGKVACVAGFGDVGKGSAASLRQGGARVMVTEIDPICALQAAMEGYEVVTMEEAVQRCDIFVTATGNEDVI TAEHMKAMKPMSIVCNIGHFDSEIQISALNNYKWTEIKPGTDLVEFPDGKQIIILAKGRLVNLGCATGHPSFVMSSSFTN QVLAQIELFTKNAEYKNEVYVLPKHLDEKVAALHLEKLGVKLTKLSKKQADYIGVSQEGPFKPDHYRY
Sequences:
>Translated_468_residues MASVLDAQNDYVVADIGLADFGRAEIRIAETEMPGLMALREEFGASQPLKGARITGSLHMTIQTAVLIETLVALGAEVRW ATCNIFSTQDHAAAAIAAAGIPVFAVKGESLAEYWDYVGSIFDWGDQTANMILDDGGDATMFALWGARVEAGEPLFEPSN AEEIEFVRALKEFLKRKPGYLTMSVAHIKGVSEETTTGVHRLYQIAKDGKLPFPAINVNDSVTKSKFDNLYGCKESLVDA IRRATDVMLAGKVACVAGFGDVGKGSAASLRQGGARVMVTEIDPICALQAAMEGYEVVTMEEAVQRCDIFVTATGNEDVI TAEHMKAMKPMSIVCNIGHFDSEIQISALNNYKWTEIKPGTDLVEFPDGKQIIILAKGRLVNLGCATGHPSFVMSSSFTN QVLAQIELFTKNAEYKNEVYVLPKHLDEKVAALHLEKLGVKLTKLSKKQADYIGVSQEGPFKPDHYRY >Mature_467_residues ASVLDAQNDYVVADIGLADFGRAEIRIAETEMPGLMALREEFGASQPLKGARITGSLHMTIQTAVLIETLVALGAEVRWA TCNIFSTQDHAAAAIAAAGIPVFAVKGESLAEYWDYVGSIFDWGDQTANMILDDGGDATMFALWGARVEAGEPLFEPSNA EEIEFVRALKEFLKRKPGYLTMSVAHIKGVSEETTTGVHRLYQIAKDGKLPFPAINVNDSVTKSKFDNLYGCKESLVDAI RRATDVMLAGKVACVAGFGDVGKGSAASLRQGGARVMVTEIDPICALQAAMEGYEVVTMEEAVQRCDIFVTATGNEDVIT AEHMKAMKPMSIVCNIGHFDSEIQISALNNYKWTEIKPGTDLVEFPDGKQIIILAKGRLVNLGCATGHPSFVMSSSFTNQ VLAQIELFTKNAEYKNEVYVLPKHLDEKVAALHLEKLGVKLTKLSKKQADYIGVSQEGPFKPDHYRY
Specific function: May play a key role in the regulation of the intracellular concentration of adenosylhomocysteine
COG id: COG0499
COG function: function code H; S-adenosylhomocysteine hydrolase
Gene ontology:
Cell location: Cytoplasm
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the adenosylhomocysteinase family
Homologues:
Organism=Homo sapiens, GI9951915, Length=460, Percent_Identity=60.4347826086956, Blast_Score=519, Evalue=1e-147, Organism=Homo sapiens, GI239937451, Length=438, Percent_Identity=60.2739726027397, Blast_Score=494, Evalue=1e-140, Organism=Homo sapiens, GI24308043, Length=463, Percent_Identity=47.9481641468683, Blast_Score=442, Evalue=1e-124, Organism=Homo sapiens, GI195539349, Length=463, Percent_Identity=47.9481641468683, Blast_Score=442, Evalue=1e-124, Organism=Homo sapiens, GI298286489, Length=463, Percent_Identity=47.9481641468683, Blast_Score=442, Evalue=1e-124, Organism=Homo sapiens, GI195539337, Length=463, Percent_Identity=47.9481641468683, Blast_Score=441, Evalue=1e-124, Organism=Homo sapiens, GI21361647, Length=463, Percent_Identity=47.0842332613391, Blast_Score=423, Evalue=1e-118, Organism=Caenorhabditis elegans, GI17506425, Length=464, Percent_Identity=61.6379310344828, Blast_Score=538, Evalue=1e-153, Organism=Saccharomyces cerevisiae, GI6320882, Length=480, Percent_Identity=59.1666666666667, Blast_Score=510, Evalue=1e-145, Organism=Drosophila melanogaster, GI24642172, Length=465, Percent_Identity=61.7204301075269, Blast_Score=537, Evalue=1e-153, Organism=Drosophila melanogaster, GI24656245, Length=464, Percent_Identity=48.7068965517241, Blast_Score=446, Evalue=1e-125, Organism=Drosophila melanogaster, GI45553387, Length=462, Percent_Identity=48.2683982683983, Blast_Score=423, Evalue=1e-118, Organism=Drosophila melanogaster, GI45553385, Length=461, Percent_Identity=48.1561822125813, Blast_Score=420, Evalue=1e-117,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): SAHH_NOVAD (Q2G6T1)
Other databases:
- EMBL: CP000248 - RefSeq: YP_497276.1 - ProteinModelPortal: Q2G6T1 - SMR: Q2G6T1 - STRING: Q2G6T1 - GeneID: 3917323 - GenomeReviews: CP000248_GR - KEGG: nar:Saro_2003 - NMPDR: fig|48935.1.peg.2270 - eggNOG: COG0499 - HOGENOM: HBG352029 - OMA: VITHDHM - PhylomeDB: Q2G6T1 - ProtClustDB: PRK05476 - BioCyc: NARO279238:SARO_2003-MONOMER - GO: GO:0005737 - GO: GO:0005488 - HAMAP: MF_00563 - InterPro: IPR000043 - InterPro: IPR015878 - InterPro: IPR020082 - PANTHER: PTHR23420 - PIRSF: PIRSF001109 - TIGRFAMs: TIGR00936
Pfam domain/function: PF05221 AdoHcyase; PF00670 AdoHcyase_NAD
EC number: =3.3.1.1
Molecular weight: Translated: 50901; Mature: 50770
Theoretical pI: Translated: 4.97; Mature: 4.97
Prosite motif: PS00738 ADOHCYASE_1; PS00739 ADOHCYASE_2
Important sites: BINDING 61-61 BINDING 135-135 BINDING 194-194 BINDING 224-224 BINDING 228-228 BINDING 229-229 BINDING 281-281 BINDING 316-316 BINDING 382-382
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 4.7 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 4.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MASVLDAQNDYVVADIGLADFGRAEIRIAETEMPGLMALREEFGASQPLKGARITGSLHM CCCCCCCCCCEEEEECCCCCCCCEEEEEECCCCCHHHHHHHHHCCCCCCCCCEEEEEEEE TIQTAVLIETLVALGAEVRWATCNIFSTQDHAAAAIAAAGIPVFAVKGESLAEYWDYVGS EHHHHHHHHHHHHCCCCEEEEEEEEECCCCHHHHHHHHCCCEEEEECCCHHHHHHHHHHH IFDWGDQTANMILDDGGDATMFALWGARVEAGEPLFEPSNAEEIEFVRALKEFLKRKPGY HHHCCCCCCCEEEECCCCEEEEEEECCEECCCCCCCCCCCCHHHHHHHHHHHHHHCCCCE LTMSVAHIKGVSEETTTGVHRLYQIAKDGKLPFPAINVNDSVTKSKFDNLYGCKESLVDA EEEEEHHHCCCCCHHHHHHHHHHHHHHCCCCCCCEECCCCCHHHHHHHHHHCHHHHHHHH IRRATDVMLAGKVACVAGFGDVGKGSAASLRQGGARVMVTEIDPICALQAAMEGYEVVTM HHHHHHHHHCCCEEEEECCCCCCCCCHHHHHCCCCEEEEEECCHHHHHHHHHCCCEEEEH EEAVQRCDIFVTATGNEDVITAEHMKAMKPMSIVCNIGHFDSEIQISALNNYKWTEIKPG HHHHHHCEEEEEECCCCCEEEHHHHHHCCCEEEEEECCCCCCEEEEEEECCCEEEEECCC TDLVEFPDGKQIIILAKGRLVNLGCATGHPSFVMSSSFTNQVLAQIELFTKNAEYKNEVY CCEEECCCCCEEEEEECCEEEEEEECCCCCCEEEECHHHHHHHHHHHHEECCCCCCCEEE VLPKHLDEKVAALHLEKLGVKLTKLSKKQADYIGVSQEGPFKPDHYRY EECCHHHHHHHHHHHHHHCCCHHHHHHHHCCEECCCCCCCCCCCCCCC >Mature Secondary Structure ASVLDAQNDYVVADIGLADFGRAEIRIAETEMPGLMALREEFGASQPLKGARITGSLHM CCCCCCCCCEEEEECCCCCCCCEEEEEECCCCCHHHHHHHHHCCCCCCCCCEEEEEEEE TIQTAVLIETLVALGAEVRWATCNIFSTQDHAAAAIAAAGIPVFAVKGESLAEYWDYVGS EHHHHHHHHHHHHCCCCEEEEEEEEECCCCHHHHHHHHCCCEEEEECCCHHHHHHHHHHH IFDWGDQTANMILDDGGDATMFALWGARVEAGEPLFEPSNAEEIEFVRALKEFLKRKPGY HHHCCCCCCCEEEECCCCEEEEEEECCEECCCCCCCCCCCCHHHHHHHHHHHHHHCCCCE LTMSVAHIKGVSEETTTGVHRLYQIAKDGKLPFPAINVNDSVTKSKFDNLYGCKESLVDA EEEEEHHHCCCCCHHHHHHHHHHHHHHCCCCCCCEECCCCCHHHHHHHHHHCHHHHHHHH IRRATDVMLAGKVACVAGFGDVGKGSAASLRQGGARVMVTEIDPICALQAAMEGYEVVTM HHHHHHHHHCCCEEEEECCCCCCCCCHHHHHCCCCEEEEEECCHHHHHHHHHCCCEEEEH EEAVQRCDIFVTATGNEDVITAEHMKAMKPMSIVCNIGHFDSEIQISALNNYKWTEIKPG HHHHHHCEEEEEECCCCCEEEHHHHHHCCCEEEEEECCCCCCEEEEEEECCCEEEEECCC TDLVEFPDGKQIIILAKGRLVNLGCATGHPSFVMSSSFTNQVLAQIELFTKNAEYKNEVY CCEEECCCCCEEEEEECCEEEEEEECCCCCCEEEECHHHHHHHHHHHHEECCCCCCCEEE VLPKHLDEKVAALHLEKLGVKLTKLSKKQADYIGVSQEGPFKPDHYRY EECCHHHHHHHHHHHHHHCCCHHHHHHHHCCEECCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA