| Definition | Novosphingobium aromaticivorans DSM 12444 chromosome, complete genome. |
|---|---|
| Accession | NC_007794 |
| Length | 3,561,584 |
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The map label for this gene is zwf [H]
Identifier: 87199910
GI number: 87199910
Start: 2005196
End: 2006644
Strand: Direct
Name: zwf [H]
Synonym: Saro_1893
Alternate gene names: 87199910
Gene position: 2005196-2006644 (Clockwise)
Preceding gene: 87199909
Following gene: 87199911
Centisome position: 56.3
GC content: 64.39
Gene sequence:
>1449_bases ATGATCGAGTCCAGCTGTTCCGCACTGCTGCTGTTCGGCGCGACCGGCGACCTTTCCCGCCGGATGCTTCTGCCTTCGCT CTACGCCCTTCACGAAGACGGCCTGATCCGGCCGGACCTGCGCATCGTGGGCACGGCCCGGTCCGAGCATGACGACGCCG AGTTCCGCGAATTCGCCCGCGAGGCGCTTGCCGAATTCCTGCCCGAGGACCGGCGGGACGAGGAAAAGCTCGCGAGTTTC CTCGAACGGCTCGAATACCAGACCCTCGATGCCTCGAATGTCGATGGCTTCGGCGAACTGGCCCGCAAGCTGGGCGACAC CTCGTGCGGCCTCTCGATTTTCCTGTCCACCGCGCCGTTCCTGTTCGAACCGACGATCGAAGGCCTGCGCCGGGCGGGCT TGGCCCATGAGAACGTGCGGATCGGCCTTGAAAAGCCGCTCGGGAACGACCTTGCATCGTCCACCCGTATCAACGATGCG GTTGCCGCCGCCTTTGCCGAGGAACAGATCTTCCGGATCGACCATTACCTTGGCAAGGAAACGGTCCAGAACCTCATGGC ACTGCGCTTTGCCAACATGATGTTCGAGCCGTTGTGGAACGCAGGCGGTATCGACCATGTGCAGATCACGGTTAGCGAGA CGGTCGGCCTCGAAGGGCGCAAGGGCTTCTACGACGACACCGGCGCACTGCGCGACATGGTGCAGAACCACATGCTCCAG TTGCTCGCCCTGACCGCAATGGAGCCGCCGGCAAGCCTCGACGCCACGTCGATCCGCGACGAAAAGGTCAAGGTCCTGCG CGCGCTTCGCCCGGTCAAGGCGGAGGAAATGGTGCGGGGCCAGTACCGCGCCGGGGCGGTGAAGGGCACGTCGGTCACCG GATACCAGGAAGACCTTGGCGAAGTGTCCGACACGGAGACCTTCGTGGCGATCAAGGCCCATGTCGACAACTGGCGTTGG ACCGGCGTGCCGTTCTACCTGCGCACCGGCAAGCGACTTGGCGAGCGGCGCAGCGAGATCGTGGTCGAGTTCAAGCCTGT TCCGCACAACCTCTTTGCCGAGCGCGGGGGAAGGCTTCGCCCCAACCGCCTCGTCATCCGCCTCCAGCCCGAGGAATATG TGCGGCTGCAGGTGATGGCGAAGGAGCCGGGGCTCGACCGTGGCGGTATTGTGCTGCGCGACGTCAATCTCGACCTTTCG TTGACCGCAGCCTTCGCCAAGGCGCGCCGCCGCATTGCCTACGAACGCCTGCTGCTCGACCTGATCGAGGGCGAACAGAC CTTGTTCGTCCGGCGAGACGAAGTGGAAGCGCAGTGGAAGTGGGTCGACGCCATCCGCAAGGTCTGGGCCGACACCGACA TGGAAGCCAAGCCCTATGCCGCAGGAAGCTGGGGGCCGAACGCAGGCATCGCCCTTACCGAGCGGGACGGGAGAAGCTGG AATGACTGA
Upstream 100 bases:
>100_bases CTGCATACATATGCGTGCTGAATCGCAGCGCCTTAGGGTCTAGGGCCTTCGTGCGAGGCACGGTTGCCGAGACCGCAACG CCAAGGGGAGATATGCGTCG
Downstream 100 bases:
>100_bases GCCGCAACCGGCGACAGTCTCGTGGGCCCAGCCAGGCAATGCGACTGCGGTTGCCGATCATATCGCGCGGGTCGTGAATG CACCGGGGCGGAAGAGGATC
Product: glucose-6-phosphate 1-dehydrogenase
Products: NA
Alternate protein names: G6PD [H]
Number of amino acids: Translated: 482; Mature: 482
Protein sequence:
>482_residues MIESSCSALLLFGATGDLSRRMLLPSLYALHEDGLIRPDLRIVGTARSEHDDAEFREFAREALAEFLPEDRRDEEKLASF LERLEYQTLDASNVDGFGELARKLGDTSCGLSIFLSTAPFLFEPTIEGLRRAGLAHENVRIGLEKPLGNDLASSTRINDA VAAAFAEEQIFRIDHYLGKETVQNLMALRFANMMFEPLWNAGGIDHVQITVSETVGLEGRKGFYDDTGALRDMVQNHMLQ LLALTAMEPPASLDATSIRDEKVKVLRALRPVKAEEMVRGQYRAGAVKGTSVTGYQEDLGEVSDTETFVAIKAHVDNWRW TGVPFYLRTGKRLGERRSEIVVEFKPVPHNLFAERGGRLRPNRLVIRLQPEEYVRLQVMAKEPGLDRGGIVLRDVNLDLS LTAAFAKARRRIAYERLLLDLIEGEQTLFVRRDEVEAQWKWVDAIRKVWADTDMEAKPYAAGSWGPNAGIALTERDGRSW ND
Sequences:
>Translated_482_residues MIESSCSALLLFGATGDLSRRMLLPSLYALHEDGLIRPDLRIVGTARSEHDDAEFREFAREALAEFLPEDRRDEEKLASF LERLEYQTLDASNVDGFGELARKLGDTSCGLSIFLSTAPFLFEPTIEGLRRAGLAHENVRIGLEKPLGNDLASSTRINDA VAAAFAEEQIFRIDHYLGKETVQNLMALRFANMMFEPLWNAGGIDHVQITVSETVGLEGRKGFYDDTGALRDMVQNHMLQ LLALTAMEPPASLDATSIRDEKVKVLRALRPVKAEEMVRGQYRAGAVKGTSVTGYQEDLGEVSDTETFVAIKAHVDNWRW TGVPFYLRTGKRLGERRSEIVVEFKPVPHNLFAERGGRLRPNRLVIRLQPEEYVRLQVMAKEPGLDRGGIVLRDVNLDLS LTAAFAKARRRIAYERLLLDLIEGEQTLFVRRDEVEAQWKWVDAIRKVWADTDMEAKPYAAGSWGPNAGIALTERDGRSW ND >Mature_482_residues MIESSCSALLLFGATGDLSRRMLLPSLYALHEDGLIRPDLRIVGTARSEHDDAEFREFAREALAEFLPEDRRDEEKLASF LERLEYQTLDASNVDGFGELARKLGDTSCGLSIFLSTAPFLFEPTIEGLRRAGLAHENVRIGLEKPLGNDLASSTRINDA VAAAFAEEQIFRIDHYLGKETVQNLMALRFANMMFEPLWNAGGIDHVQITVSETVGLEGRKGFYDDTGALRDMVQNHMLQ LLALTAMEPPASLDATSIRDEKVKVLRALRPVKAEEMVRGQYRAGAVKGTSVTGYQEDLGEVSDTETFVAIKAHVDNWRW TGVPFYLRTGKRLGERRSEIVVEFKPVPHNLFAERGGRLRPNRLVIRLQPEEYVRLQVMAKEPGLDRGGIVLRDVNLDLS LTAAFAKARRRIAYERLLLDLIEGEQTLFVRRDEVEAQWKWVDAIRKVWADTDMEAKPYAAGSWGPNAGIALTERDGRSW ND
Specific function: Pentose phosphate pathway; first step. [C]
COG id: COG0364
COG function: function code G; Glucose-6-phosphate 1-dehydrogenase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the glucose-6-phosphate dehydrogenase family [H]
Homologues:
Organism=Homo sapiens, GI108773793, Length=486, Percent_Identity=36.8312757201646, Blast_Score=305, Evalue=6e-83, Organism=Homo sapiens, GI109389365, Length=486, Percent_Identity=36.8312757201646, Blast_Score=305, Evalue=8e-83, Organism=Homo sapiens, GI52145310, Length=475, Percent_Identity=28.4210526315789, Blast_Score=166, Evalue=6e-41, Organism=Escherichia coli, GI1788158, Length=480, Percent_Identity=50.2083333333333, Blast_Score=456, Evalue=1e-129, Organism=Caenorhabditis elegans, GI17538218, Length=486, Percent_Identity=36.0082304526749, Blast_Score=308, Evalue=4e-84, Organism=Saccharomyces cerevisiae, GI6324088, Length=474, Percent_Identity=34.5991561181435, Blast_Score=265, Evalue=9e-72, Organism=Drosophila melanogaster, GI24643350, Length=469, Percent_Identity=35.3944562899787, Blast_Score=280, Evalue=2e-75, Organism=Drosophila melanogaster, GI24643352, Length=469, Percent_Identity=35.3944562899787, Blast_Score=280, Evalue=2e-75, Organism=Drosophila melanogaster, GI221513548, Length=488, Percent_Identity=28.2786885245902, Blast_Score=182, Evalue=5e-46,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001282 - InterPro: IPR019796 - InterPro: IPR022675 - InterPro: IPR022674 - InterPro: IPR016040 [H]
Pfam domain/function: PF02781 G6PD_C; PF00479 G6PD_N [H]
EC number: =1.1.1.49 [H]
Molecular weight: Translated: 54175; Mature: 54175
Theoretical pI: Translated: 5.15; Mature: 5.15
Prosite motif: PS00069 G6P_DEHYDROGENASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIESSCSALLLFGATGDLSRRMLLPSLYALHEDGLIRPDLRIVGTARSEHDDAEFREFAR CCCCCCCEEEEEECCCCCHHHHHHHHHHHHCCCCCCCCCCEEEECCCCCCCHHHHHHHHH EALAEFLPEDRRDEEKLASFLERLEYQTLDASNVDGFGELARKLGDTSCGLSIFLSTAPF HHHHHHCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHCCCCCCCEEEECCCCC LFEPTIEGLRRAGLAHENVRIGLEKPLGNDLASSTRINDAVAAAFAEEQIFRIDHYLGKE EECHHHHHHHHHCCCCCCEEEEECCCCCCHHHHHCHHHHHHHHHHHHHHHHHHHHHHCHH TVQNLMALRFANMMFEPLWNAGGIDHVQITVSETVGLEGRKGFYDDTGALRDMVQNHMLQ HHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEEHHCCCCCCCCCCCCHHHHHHHHHHHHHH LLALTAMEPPASLDATSIRDEKVKVLRALRPVKAEEMVRGQYRAGAVKGTSVTGYQEDLG HHHHHHCCCCCCCCCCCCHHHHHHHHHHHCCCCHHHHHHCHHHCCCCCCCCCCCCHHHHC EVSDTETFVAIKAHVDNWRWTGVPFYLRTGKRLGERRSEIVVEFKPVPHNLFAERGGRLR CCCCCCEEEEEEEECCCEEECCCCCEECCCHHHHCCCCCEEEEEECCCHHHHHHCCCCCC PNRLVIRLQPEEYVRLQVMAKEPGLDRGGIVLRDVNLDLSLTAAFAKARRRIAYERLLLD CCEEEEEECCCCEEEEEEEECCCCCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHH LIEGEQTLFVRRDEVEAQWKWVDAIRKVWADTDMEAKPYAAGSWGPNAGIALTERDGRSW HHCCCCEEEEEECCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCEEEEECCCCCC ND CC >Mature Secondary Structure MIESSCSALLLFGATGDLSRRMLLPSLYALHEDGLIRPDLRIVGTARSEHDDAEFREFAR CCCCCCCEEEEEECCCCCHHHHHHHHHHHHCCCCCCCCCCEEEECCCCCCCHHHHHHHHH EALAEFLPEDRRDEEKLASFLERLEYQTLDASNVDGFGELARKLGDTSCGLSIFLSTAPF HHHHHHCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHCCCCCCCEEEECCCCC LFEPTIEGLRRAGLAHENVRIGLEKPLGNDLASSTRINDAVAAAFAEEQIFRIDHYLGKE EECHHHHHHHHHCCCCCCEEEEECCCCCCHHHHHCHHHHHHHHHHHHHHHHHHHHHHCHH TVQNLMALRFANMMFEPLWNAGGIDHVQITVSETVGLEGRKGFYDDTGALRDMVQNHMLQ HHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEEHHCCCCCCCCCCCCHHHHHHHHHHHHHH LLALTAMEPPASLDATSIRDEKVKVLRALRPVKAEEMVRGQYRAGAVKGTSVTGYQEDLG HHHHHHCCCCCCCCCCCCHHHHHHHHHHHCCCCHHHHHHCHHHCCCCCCCCCCCCHHHHC EVSDTETFVAIKAHVDNWRWTGVPFYLRTGKRLGERRSEIVVEFKPVPHNLFAERGGRLR CCCCCCEEEEEEEECCCEEECCCCCEECCCHHHHCCCCCEEEEEECCCHHHHHHCCCCCC PNRLVIRLQPEEYVRLQVMAKEPGLDRGGIVLRDVNLDLSLTAAFAKARRRIAYERLLLD CCEEEEEECCCCEEEEEEEECCCCCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHH LIEGEQTLFVRRDEVEAQWKWVDAIRKVWADTDMEAKPYAAGSWGPNAGIALTERDGRSW HHCCCCEEEEEECCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCEEEEECCCCCC ND CC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 2254282 [H]