| Definition | Novosphingobium aromaticivorans DSM 12444 chromosome, complete genome. |
|---|---|
| Accession | NC_007794 |
| Length | 3,561,584 |
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The map label for this gene is 87199909
Identifier: 87199909
GI number: 87199909
Start: 2002968
End: 2005016
Strand: Direct
Name: 87199909
Synonym: Saro_1892
Alternate gene names: NA
Gene position: 2002968-2005016 (Clockwise)
Preceding gene: 87199908
Following gene: 87199910
Centisome position: 56.24
GC content: 63.88
Gene sequence:
>2049_bases ATGCGTAACCTTCTGAACGTTGCAGCGCCGCTGGCGCTGACCCTTTCGTGCGCCCTGGCGACGCCTGCCACGGCGGAGAC GGTGACGGCAACATCGCCGGACGGCAGCCTGGTGCTGTCGGTGACCACCGACAACGACGGCCACCCGCTCTACAGCCTGA CCCGCAAGGGCAAGCTCCTGCTAGGATCGTCGATGCTGGGTTTCATCACCAGCGATGGCCCAACTATGCAACGCGGGCAG ACCATCATCGGCAGCGAGAAGGGATCGGGCAAGGAGACCTGGGAACAGCCCTGGGGTGAGCGGCGCTATGTCACCGACAA TCATAACGAGCTTCTGGTGAAGTTCGAACAGGTGCCGGACTGGGGCGGGCGCCGCATGAACGTGCGCTTCCGCCTGTTCG ACGATGGCTTCGGTTTCCGCTACGAGATCCCCGAACAGCCCGCGATGAAGGTGATGAAGATCGCGGACGAGCTTACCGAG TTCAACGTGGCGCAGAACGGCACGGCTTGGTGGATTCCGGGCGGTGAATGGAACCGCTATGAGCAGGTCTACCAGAAGAC GGCGATCGACGGCGTCTCGACCGCGCACACTCCGATCACGATGAAGCTGGCGGACGGGACGCACCTGTCGTTCCACGAGG CGGCGCTGGTGGACTATTCGGCGATGTGGCTGAAGCGGCAGACGGGCACCTCGTTCCGCGCCACGCTTTCACCTTCGCCG AACGGGCCCAAGGTGACGCGCGCGGTTCCGTTCAACACCCCATGGCGCACCGTGCGGATTGCCGACAATGCGAAGGGCAT CGTCGAGAACGACCTCGAACTGAACCTCAACGAGCCGAACAGGATCGGTGACGTTTCGTACTTCAAGCCGATGAAGTACA TCGGCATCTGGTGGGGCATGATCCGGGGCGACTGGTCCTGGGCGGAAGGCCCGAAGCACGGCGCGACGACCGCGCGGACC AAGCAGTACATCGACTTCGCAGCCAGGCACGGTTTTGGCGGGGTATTGGTGGAAGGCTGGGACAAGGGCTGGAACGGGAC CTGGTTCGGCAGCGGCAAGGAGTTCTCCTATACCGAGGCGACGCCCGACTTCGATCTTGAGGCAGTGACGAAATATGGCG CGAAGAAGGGCGTCATGCTGATCGGCCATCACGAGACGGGCGGCAACATCGCGAACTACGAGGCGCAGCTCGAGGACGCA ATGAAGCTCTACGACAAGCTGGGCGTGCGCGCGGTGAAGACCGGGTACGTCGCCGATGCGGGTGGCATCCTTGCACCAGG CGATGCGCCGGGCACCTACCGGATGGAGTACCACGACGGGCAGCGGCAGGTGCAGCATCACCTCAAGGTGGTCGAGATCG CCGCGAAGTATCGCATCGCGATCAACGCGCACGAGCCGGTGAAGGACACCGGCCTTCGCCGCACATATCCCAACTGGATC GACCGCGAAGGCGCGCGCGGCATGGAATACAACGCGTGGGGGCAGTTCGCCAACGGACCGGACCACGAGCCGACGCTGGT CTATACGCGGATGCTGTCGGGGCCGATGGACTACACCCCGGGCATCCTCAGCCTGGAAGGCGCCAACAAGGTGCCGCTGG CATCGACGCTCGCCAAGCAGCTCGGGCTGTACCTTGCGATCTATTCGCCGATCCAGATGGCAGCGGATTTCATCGAGAGC CTCGAATCGCACCCGAAGGAACTGGCGTTCATCAAACAGGTCCCGGCAGATTGGTCCGAAAGCCACCTGATCGCGGGCGA AGTTGGCGACTATGCGATCTTCGCGCGCAAGGACCGCAACAGCGAGGACTGGTACGTCGGCGGCGTCAATGATGCGACGG CGCGCGACGTTTCGCTTTCCCTCGACTTCCTCGATCCCGGCAAGACCTACACCGCGACGGTGTGGAAGGACGGCGAAGGC GCCACCTACGAAACCGAGGCACGCCACCGGATCGCCTATGCCACGCTCAAGGTGAAGAAGGGCGACGTGCTGCCCGCCTG GCTGGCGCCGGGAGGCGGACTTGCGGTGCGCCTCCACCCGGGGAAGTAG
Upstream 100 bases:
>100_bases ACGGGCTGGTGCGGGAGGGCAAGGAAATGGCGTCGGTCAACGGCGCGACAGTGGGGCAGTTGCCGCCGTTCGGCGCGCTC CTGATCGAAGAGAGGATCTG
Downstream 100 bases:
>100_bases TGGGCGGCCGCTGCGACATTGCAGTTGGTGAAGGCGCAATGCACAGTCTTCGCCAACTGCTTCCGTGCGCATAGCTATCC TGCATACATATGCGTGCTGA
Product: alpha-glucosidase
Products: NA
Alternate protein names: Glycoside Hydrolase; Glycoside Hydrolase Family; Alpha-Glucosidase Family Protein; Alpha-Glucosidase Protein; Glycoside Hydrolase Family Protein; Esterase; Alpha-Glucosidase-Like Protein; Glycosyl Hydrolase Family; Alpha-Glucosidase SusB; Secreted Protein
Number of amino acids: Translated: 682; Mature: 682
Protein sequence:
>682_residues MRNLLNVAAPLALTLSCALATPATAETVTATSPDGSLVLSVTTDNDGHPLYSLTRKGKLLLGSSMLGFITSDGPTMQRGQ TIIGSEKGSGKETWEQPWGERRYVTDNHNELLVKFEQVPDWGGRRMNVRFRLFDDGFGFRYEIPEQPAMKVMKIADELTE FNVAQNGTAWWIPGGEWNRYEQVYQKTAIDGVSTAHTPITMKLADGTHLSFHEAALVDYSAMWLKRQTGTSFRATLSPSP NGPKVTRAVPFNTPWRTVRIADNAKGIVENDLELNLNEPNRIGDVSYFKPMKYIGIWWGMIRGDWSWAEGPKHGATTART KQYIDFAARHGFGGVLVEGWDKGWNGTWFGSGKEFSYTEATPDFDLEAVTKYGAKKGVMLIGHHETGGNIANYEAQLEDA MKLYDKLGVRAVKTGYVADAGGILAPGDAPGTYRMEYHDGQRQVQHHLKVVEIAAKYRIAINAHEPVKDTGLRRTYPNWI DREGARGMEYNAWGQFANGPDHEPTLVYTRMLSGPMDYTPGILSLEGANKVPLASTLAKQLGLYLAIYSPIQMAADFIES LESHPKELAFIKQVPADWSESHLIAGEVGDYAIFARKDRNSEDWYVGGVNDATARDVSLSLDFLDPGKTYTATVWKDGEG ATYETEARHRIAYATLKVKKGDVLPAWLAPGGGLAVRLHPGK
Sequences:
>Translated_682_residues MRNLLNVAAPLALTLSCALATPATAETVTATSPDGSLVLSVTTDNDGHPLYSLTRKGKLLLGSSMLGFITSDGPTMQRGQ TIIGSEKGSGKETWEQPWGERRYVTDNHNELLVKFEQVPDWGGRRMNVRFRLFDDGFGFRYEIPEQPAMKVMKIADELTE FNVAQNGTAWWIPGGEWNRYEQVYQKTAIDGVSTAHTPITMKLADGTHLSFHEAALVDYSAMWLKRQTGTSFRATLSPSP NGPKVTRAVPFNTPWRTVRIADNAKGIVENDLELNLNEPNRIGDVSYFKPMKYIGIWWGMIRGDWSWAEGPKHGATTART KQYIDFAARHGFGGVLVEGWDKGWNGTWFGSGKEFSYTEATPDFDLEAVTKYGAKKGVMLIGHHETGGNIANYEAQLEDA MKLYDKLGVRAVKTGYVADAGGILAPGDAPGTYRMEYHDGQRQVQHHLKVVEIAAKYRIAINAHEPVKDTGLRRTYPNWI DREGARGMEYNAWGQFANGPDHEPTLVYTRMLSGPMDYTPGILSLEGANKVPLASTLAKQLGLYLAIYSPIQMAADFIES LESHPKELAFIKQVPADWSESHLIAGEVGDYAIFARKDRNSEDWYVGGVNDATARDVSLSLDFLDPGKTYTATVWKDGEG ATYETEARHRIAYATLKVKKGDVLPAWLAPGGGLAVRLHPGK >Mature_682_residues MRNLLNVAAPLALTLSCALATPATAETVTATSPDGSLVLSVTTDNDGHPLYSLTRKGKLLLGSSMLGFITSDGPTMQRGQ TIIGSEKGSGKETWEQPWGERRYVTDNHNELLVKFEQVPDWGGRRMNVRFRLFDDGFGFRYEIPEQPAMKVMKIADELTE FNVAQNGTAWWIPGGEWNRYEQVYQKTAIDGVSTAHTPITMKLADGTHLSFHEAALVDYSAMWLKRQTGTSFRATLSPSP NGPKVTRAVPFNTPWRTVRIADNAKGIVENDLELNLNEPNRIGDVSYFKPMKYIGIWWGMIRGDWSWAEGPKHGATTART KQYIDFAARHGFGGVLVEGWDKGWNGTWFGSGKEFSYTEATPDFDLEAVTKYGAKKGVMLIGHHETGGNIANYEAQLEDA MKLYDKLGVRAVKTGYVADAGGILAPGDAPGTYRMEYHDGQRQVQHHLKVVEIAAKYRIAINAHEPVKDTGLRRTYPNWI DREGARGMEYNAWGQFANGPDHEPTLVYTRMLSGPMDYTPGILSLEGANKVPLASTLAKQLGLYLAIYSPIQMAADFIES LESHPKELAFIKQVPADWSESHLIAGEVGDYAIFARKDRNSEDWYVGGVNDATARDVSLSLDFLDPGKTYTATVWKDGEG ATYETEARHRIAYATLKVKKGDVLPAWLAPGGGLAVRLHPGK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 75418; Mature: 75418
Theoretical pI: Translated: 6.61; Mature: 6.61
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.1 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 0.1 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRNLLNVAAPLALTLSCALATPATAETVTATSPDGSLVLSVTTDNDGHPLYSLTRKGKLL CCCHHHHHHHHHHEEEEHCCCCCCCCEEEEECCCCCEEEEEEECCCCCCEEEECCCCEEE LGSSMLGFITSDGPTMQRGQTIIGSEKGSGKETWEQPWGERRYVTDNHNELLVKFEQVPD ECCCEEEEEECCCCCHHCCCEEEECCCCCCCCHHHCCCCCCCCEECCCCEEEEEEECCCC WGGRRMNVRFRLFDDGFGFRYEIPEQPAMKVMKIADELTEFNVAQNGTAWWIPGGEWNRY CCCCEEEEEEEEEECCCCEEEECCCCHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCHHH EQVYQKTAIDGVSTAHTPITMKLADGTHLSFHEAALVDYSAMWLKRQTGTSFRATLSPSP HHHHHHHHCCCCCCCCCCEEEEECCCCCEEEHHHHHHHHHHHEEEECCCCCEEEEECCCC NGPKVTRAVPFNTPWRTVRIADNAKGIVENDLELNLNEPNRIGDVSYFKPMKYIGIWWGM CCCEEEEEECCCCCCEEEEEECCCCCEEECCCEEECCCCCCCCCCHHHCCHHHHHHEEEE IRGDWSWAEGPKHGATTARTKQYIDFAARHGFGGVLVEGWDKGWNGTWFGSGKEFSYTEA EECCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCEEEECCCCCCCCEECCCCCCCEECCC TPDFDLEAVTKYGAKKGVMLIGHHETGGNIANYEAQLEDAMKLYDKLGVRAVKTGYVADA CCCCCHHHHHHCCCCCCEEEEEEECCCCCEECHHHHHHHHHHHHHHHCCEEEECCCEECC GGILAPGDAPGTYRMEYHDGQRQVQHHLKVVEIAAKYRIAINAHEPVKDTGLRRTYPNWI CCEECCCCCCCEEEEEEECCHHHHHHHHHHEEEEEEEEEEEECCCCCHHCCCCCCCCCHH DREGARGMEYNAWGQFANGPDHEPTLVYTRMLSGPMDYTPGILSLEGANKVPLASTLAKQ CCCCCCCCEECCCCCCCCCCCCCCEEEEEEHHCCCCCCCCCEEEECCCCCCCHHHHHHHH LGLYLAIYSPIQMAADFIESLESHPKELAFIKQVPADWSESHLIAGEVGDYAIFARKDRN HCEEEEECCHHHHHHHHHHHHHCCHHHHHHHHHCCCCCCCCEEEEECCCCEEEEEECCCC SEDWYVGGVNDATARDVSLSLDFLDPGKTYTATVWKDGEGATYETEARHRIAYATLKVKK CCCEEEECCCCCCCCEEEEEEEECCCCCEEEEEEEECCCCCEEECCCCCEEEEEEEEEEC GDVLPAWLAPGGGLAVRLHPGK CCCCEEEECCCCCEEEEEECCC >Mature Secondary Structure MRNLLNVAAPLALTLSCALATPATAETVTATSPDGSLVLSVTTDNDGHPLYSLTRKGKLL CCCHHHHHHHHHHEEEEHCCCCCCCCEEEEECCCCCEEEEEEECCCCCCEEEECCCCEEE LGSSMLGFITSDGPTMQRGQTIIGSEKGSGKETWEQPWGERRYVTDNHNELLVKFEQVPD ECCCEEEEEECCCCCHHCCCEEEECCCCCCCCHHHCCCCCCCCEECCCCEEEEEEECCCC WGGRRMNVRFRLFDDGFGFRYEIPEQPAMKVMKIADELTEFNVAQNGTAWWIPGGEWNRY CCCCEEEEEEEEEECCCCEEEECCCCHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCHHH EQVYQKTAIDGVSTAHTPITMKLADGTHLSFHEAALVDYSAMWLKRQTGTSFRATLSPSP HHHHHHHHCCCCCCCCCCEEEEECCCCCEEEHHHHHHHHHHHEEEECCCCCEEEEECCCC NGPKVTRAVPFNTPWRTVRIADNAKGIVENDLELNLNEPNRIGDVSYFKPMKYIGIWWGM CCCEEEEEECCCCCCEEEEEECCCCCEEECCCEEECCCCCCCCCCHHHCCHHHHHHEEEE IRGDWSWAEGPKHGATTARTKQYIDFAARHGFGGVLVEGWDKGWNGTWFGSGKEFSYTEA EECCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCEEEECCCCCCCCEECCCCCCCEECCC TPDFDLEAVTKYGAKKGVMLIGHHETGGNIANYEAQLEDAMKLYDKLGVRAVKTGYVADA CCCCCHHHHHHCCCCCCEEEEEEECCCCCEECHHHHHHHHHHHHHHHCCEEEECCCEECC GGILAPGDAPGTYRMEYHDGQRQVQHHLKVVEIAAKYRIAINAHEPVKDTGLRRTYPNWI CCEECCCCCCCEEEEEEECCHHHHHHHHHHEEEEEEEEEEEECCCCCHHCCCCCCCCCHH DREGARGMEYNAWGQFANGPDHEPTLVYTRMLSGPMDYTPGILSLEGANKVPLASTLAKQ CCCCCCCCEECCCCCCCCCCCCCCEEEEEEHHCCCCCCCCCEEEECCCCCCCHHHHHHHH LGLYLAIYSPIQMAADFIESLESHPKELAFIKQVPADWSESHLIAGEVGDYAIFARKDRN HCEEEEECCHHHHHHHHHHHHHCCHHHHHHHHHCCCCCCCCEEEEECCCCEEEEEECCCC SEDWYVGGVNDATARDVSLSLDFLDPGKTYTATVWKDGEGATYETEARHRIAYATLKVKK CCCEEEECCCCCCCCEEEEEEEECCCCCEEEEEEEECCCCCEEECCCCCEEEEEEEEEEC GDVLPAWLAPGGGLAVRLHPGK CCCCEEEECCCCCEEEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA