| Definition | Novosphingobium aromaticivorans DSM 12444 chromosome, complete genome. |
|---|---|
| Accession | NC_007794 |
| Length | 3,561,584 |
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The map label for this gene is pgl [H]
Identifier: 87199911
GI number: 87199911
Start: 2006637
End: 2007263
Strand: Direct
Name: pgl [H]
Synonym: Saro_1894
Alternate gene names: 87199911
Gene position: 2006637-2007263 (Clockwise)
Preceding gene: 87199910
Following gene: 87199912
Centisome position: 56.34
GC content: 64.91
Gene sequence:
>627_bases ATGACTGAGCCGCAACCGGCGACAGTCTCGTGGGCCCAGCCAGGCAATGCGACTGCGGTTGCCGATCATATCGCGCGGGT CGTGAATGCACCGGGGCGGAAGAGGATCGCATTCACAGGCGGTTCGACGCCGATCAAGGTTCTGTCCCTGCTGAAGGATA GACCGCTCGACTGGTCTTCGGTGACTATTGCGCTGACCGACGACCGGTGCGTGCCGGACGACCATCCGGCCAGCAATTTC GGGAAGATCCACGCCGCGCTCGGCGCGTCCGGCGCACGGTTCGAGCGCCTTGAGGAAGGCGCACAGGTAGAGCCGTTCGA CCTCGTCTGGCTCGGCATGGGAGAGGACGGACACGTCGCCTCGCTGTTTCCCCACATGCAGGCGGTGGTGCGTCCGGGAC CGACGGTGATCGCGACGACGCCGATCCCGCTTCCGCCGGAAGCACCATTCGACAGGCTGACCCTGAACCGCAAGGCGCTC AAGGCGAGCCGGGAGATAATCCTCGTGGTCACCGGCGCTTCCAAGAAGGCGCTGCTTGAGCGCGTCATTGCCGGCGACGA TGGCTATCCCGTCGCCGATTTCCTGCGTGGCTATGGCCCGCCGGTCACGATCTACTGGAGCGAATGA
Upstream 100 bases:
>100_bases GTCTGGGCCGACACCGACATGGAAGCCAAGCCCTATGCCGCAGGAAGCTGGGGGCCGAACGCAGGCATCGCCCTTACCGA GCGGGACGGGAGAAGCTGGA
Downstream 100 bases:
>100_bases TGGCGATGAACCCAACTGTCGAGCGCGTCACCCAGCGCATCATCGAGCGTTCGCGCAGCACCCGCGCCGCATATCTCGAT CTTGTGGAACGTTCGCGCGA
Product: 6-phosphogluconolactonase
Products: NA
Alternate protein names: 6PGL [H]
Number of amino acids: Translated: 208; Mature: 207
Protein sequence:
>208_residues MTEPQPATVSWAQPGNATAVADHIARVVNAPGRKRIAFTGGSTPIKVLSLLKDRPLDWSSVTIALTDDRCVPDDHPASNF GKIHAALGASGARFERLEEGAQVEPFDLVWLGMGEDGHVASLFPHMQAVVRPGPTVIATTPIPLPPEAPFDRLTLNRKAL KASREIILVVTGASKKALLERVIAGDDGYPVADFLRGYGPPVTIYWSE
Sequences:
>Translated_208_residues MTEPQPATVSWAQPGNATAVADHIARVVNAPGRKRIAFTGGSTPIKVLSLLKDRPLDWSSVTIALTDDRCVPDDHPASNF GKIHAALGASGARFERLEEGAQVEPFDLVWLGMGEDGHVASLFPHMQAVVRPGPTVIATTPIPLPPEAPFDRLTLNRKAL KASREIILVVTGASKKALLERVIAGDDGYPVADFLRGYGPPVTIYWSE >Mature_207_residues TEPQPATVSWAQPGNATAVADHIARVVNAPGRKRIAFTGGSTPIKVLSLLKDRPLDWSSVTIALTDDRCVPDDHPASNFG KIHAALGASGARFERLEEGAQVEPFDLVWLGMGEDGHVASLFPHMQAVVRPGPTVIATTPIPLPPEAPFDRLTLNRKALK ASREIILVVTGASKKALLERVIAGDDGYPVADFLRGYGPPVTIYWSE
Specific function: Hydrolysis of 6-phosphogluconolactone to 6- phosphogluconate [H]
COG id: COG0363
COG function: function code G; 6-phosphogluconolactonase/Glucosamine-6-phosphate isomerase/deaminase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the glucosamine/galactosamine-6-phosphate isomerase family. 6-phosphogluconolactonase subfamily [H]
Homologues:
Organism=Homo sapiens, GI52145310, Length=213, Percent_Identity=29.5774647887324, Blast_Score=72, Evalue=5e-13, Organism=Drosophila melanogaster, GI24641119, Length=179, Percent_Identity=28.4916201117318, Blast_Score=64, Evalue=6e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005900 [H]
Pfam domain/function: NA
EC number: =3.1.1.31 [H]
Molecular weight: Translated: 22305; Mature: 22174
Theoretical pI: Translated: 6.68; Mature: 6.68
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 1.9 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 1.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTEPQPATVSWAQPGNATAVADHIARVVNAPGRKRIAFTGGSTPIKVLSLLKDRPLDWSS CCCCCCCEEEECCCCCCHHHHHHHHHHHCCCCCEEEEEECCCCHHHHHHHHHCCCCCCCE VTIALTDDRCVPDDHPASNFGKIHAALGASGARFERLEEGAQVEPFDLVWLGMGEDGHVA EEEEEECCCCCCCCCCCCCCCEEEHHHCCCCHHHHHHHCCCCCCCEEEEEEECCCCCCHH SLFPHMQAVVRPGPTVIATTPIPLPPEAPFDRLTLNRKALKASREIILVVTGASKKALLE HHHHHHHHHHCCCCCEEEECCCCCCCCCCCHHHCCCHHHHHCCCEEEEEEECCCHHHHHH RVIAGDDGYPVADFLRGYGPPVTIYWSE HHHCCCCCCCHHHHHHCCCCCEEEEECC >Mature Secondary Structure TEPQPATVSWAQPGNATAVADHIARVVNAPGRKRIAFTGGSTPIKVLSLLKDRPLDWSS CCCCCCEEEECCCCCCHHHHHHHHHHHCCCCCEEEEEECCCCHHHHHHHHHCCCCCCCE VTIALTDDRCVPDDHPASNFGKIHAALGASGARFERLEEGAQVEPFDLVWLGMGEDGHVA EEEEEECCCCCCCCCCCCCCCEEEHHHCCCCHHHHHHHCCCCCCCEEEEEEECCCCCCHH SLFPHMQAVVRPGPTVIATTPIPLPPEAPFDRLTLNRKALKASREIILVVTGASKKALLE HHHHHHHHHHCCCCCEEEECCCCCCCCCCCHHHCCCHHHHHCCCEEEEEEECCCHHHHHH RVIAGDDGYPVADFLRGYGPPVTIYWSE HHHCCCCCCCHHHHHHCCCCCEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 10984043 [H]