| Definition | Novosphingobium aromaticivorans DSM 12444 chromosome, complete genome. |
|---|---|
| Accession | NC_007794 |
| Length | 3,561,584 |
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The map label for this gene is 87199742
Identifier: 87199742
GI number: 87199742
Start: 1814724
End: 1815650
Strand: Direct
Name: 87199742
Synonym: Saro_1725
Alternate gene names: NA
Gene position: 1814724-1815650 (Clockwise)
Preceding gene: 87199741
Following gene: 87199743
Centisome position: 50.95
GC content: 68.28
Gene sequence:
>927_bases ATGAAGAAAGCGGCATATCTTTTCGCGTTGGCGGCGAGCGTTCAGGTGGTTCCGGCCATCGCGCAGGACGGTCCGCCGCC TCTCGCGCCAGCGTCCGCCCCGGTCGAGCCGGACGCCGTTCCGCTCTACGGTGCGCAGACGCCGGGCAGCGCTTCGAGCG AGCAGTGGGTCAAGTTCGGCGGGCGCGACTATGCGGTCCGCAACGTAACGCGCCCGACGATCACGCCGGTCCTGCCCGAT CCGGCGAAGGCGACGGGCGCGGCGGTCGTCGTCGCGCCTGGCGGTGCGTTCATGATGCTGGCGATGGACCACGAAGGCTG GAAGGTCGCCCGCGCCCTTGCCGACCGAGGCATCGCCGCGTTCGTGCTCAAGTACCGTCTCAACCCGACGCCGAGGGACG AGGCCGAAGCGGGCCGGTACATGAACGAGCAACTCGGCAGGGAAGTCGGCCATCCGATGACCGGCGACCTTCTCGGCAAG TCGATGGCCCCTGCTGACGGCAAGGCCGCCATCGCATGGGTCCGGACCAACGCCGCGCGCTTCGGCATCGATCCCGCACG CGTCGGCATGATCGGTTTCTCTGCTGGTGCCATGACCACGCGCCGCGTGGGCCTGGACGGCGACGCCGCCACGCGTCCTG CATTCCTCGGCTATATCTATGGCCCGCAGGACGCCGAGCCGGTGCCTGCCGATGCGCCACCGATGTTCGATGCCATCGCT CTCGACGATGCGCTCTTCCCGTCGAAGGGCTTTCCCATCGCCCAGGCCTGGCTCGATGCCAGGCGTCCGGTCGAGATCCA CGGCTACCAGAAGGGCAACCACGGCTTCGGCCTTGGCCTGCCCGGCACCACCACCACCCTCCTGATCGACCAGTTCACCG CGTGGCTCCAGATGCAGGGCTTCCTCGCGCGAAAGGACAGCAAGTGA
Upstream 100 bases:
>100_bases GCTTCGGACATGTCGGCAAAATCCACCGGCAACATGATCAACGTTGATGCGGGGAACGCCCAGGCCTTCACTCGCTGACC GTTCCCGGGAGAGGATAACG
Downstream 100 bases:
>100_bases CTCTCCCGATTTCCGCAGATCTCATCGCCGAACGCAACGCCCGCCACGTCGAGGCGCTCGAGGAAGATTATGCCGCGCTC GGTCGCAAGCTTGCACGCAC
Product: hypothetical protein
Products: NA
Alternate protein names: Endo-1 4-Beta-Xylanase; Endo-1 4-Beta-Xylanase B; Esterase/Lipase-Like Protein; Esterase/Lipase-Like
Number of amino acids: Translated: 308; Mature: 308
Protein sequence:
>308_residues MKKAAYLFALAASVQVVPAIAQDGPPPLAPASAPVEPDAVPLYGAQTPGSASSEQWVKFGGRDYAVRNVTRPTITPVLPD PAKATGAAVVVAPGGAFMMLAMDHEGWKVARALADRGIAAFVLKYRLNPTPRDEAEAGRYMNEQLGREVGHPMTGDLLGK SMAPADGKAAIAWVRTNAARFGIDPARVGMIGFSAGAMTTRRVGLDGDAATRPAFLGYIYGPQDAEPVPADAPPMFDAIA LDDALFPSKGFPIAQAWLDARRPVEIHGYQKGNHGFGLGLPGTTTTLLIDQFTAWLQMQGFLARKDSK
Sequences:
>Translated_308_residues MKKAAYLFALAASVQVVPAIAQDGPPPLAPASAPVEPDAVPLYGAQTPGSASSEQWVKFGGRDYAVRNVTRPTITPVLPD PAKATGAAVVVAPGGAFMMLAMDHEGWKVARALADRGIAAFVLKYRLNPTPRDEAEAGRYMNEQLGREVGHPMTGDLLGK SMAPADGKAAIAWVRTNAARFGIDPARVGMIGFSAGAMTTRRVGLDGDAATRPAFLGYIYGPQDAEPVPADAPPMFDAIA LDDALFPSKGFPIAQAWLDARRPVEIHGYQKGNHGFGLGLPGTTTTLLIDQFTAWLQMQGFLARKDSK >Mature_308_residues MKKAAYLFALAASVQVVPAIAQDGPPPLAPASAPVEPDAVPLYGAQTPGSASSEQWVKFGGRDYAVRNVTRPTITPVLPD PAKATGAAVVVAPGGAFMMLAMDHEGWKVARALADRGIAAFVLKYRLNPTPRDEAEAGRYMNEQLGREVGHPMTGDLLGK SMAPADGKAAIAWVRTNAARFGIDPARVGMIGFSAGAMTTRRVGLDGDAATRPAFLGYIYGPQDAEPVPADAPPMFDAIA LDDALFPSKGFPIAQAWLDARRPVEIHGYQKGNHGFGLGLPGTTTTLLIDQFTAWLQMQGFLARKDSK
Specific function: Unknown
COG id: COG0657
COG function: function code I; Esterase/lipase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 32523; Mature: 32523
Theoretical pI: Translated: 8.74; Mature: 8.74
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.6 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.6 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKKAAYLFALAASVQVVPAIAQDGPPPLAPASAPVEPDAVPLYGAQTPGSASSEQWVKFG CCCHHEEHHHHHHHHEEEHHHCCCCCCCCCCCCCCCCCCEEEECCCCCCCCCCHHHHHCC GRDYAVRNVTRPTITPVLPDPAKATGAAVVVAPGGAFMMLAMDHEGWKVARALADRGIAA CCCEEEECCCCCCCCCCCCCCCCCCCCEEEEECCCEEEEEEECCCCHHHHHHHHHCCCEE FVLKYRLNPTPRDEAEAGRYMNEQLGREVGHPMTGDLLGKSMAPADGKAAIAWVRTNAAR EEEEEECCCCCCCHHHHHHHHHHHHHHHHCCCCCHHHHCCCCCCCCCCEEEEEEEECCHH FGIDPARVGMIGFSAGAMTTRRVGLDGDAATRPAFLGYIYGPQDAEPVPADAPPMFDAIA HCCCHHHEEEEEECCCCCEEEEECCCCCCCCCCEEEEEEECCCCCCCCCCCCCCCHHHHH LDDALFPSKGFPIAQAWLDARRPVEIHGYQKGNHGFGLGLPGTTTTLLIDQFTAWLQMQG HCCCCCCCCCCCHHHHHHCCCCCEEEECEECCCCCEECCCCCCHHHHHHHHHHHHHHHHH FLARKDSK HHHCCCCC >Mature Secondary Structure MKKAAYLFALAASVQVVPAIAQDGPPPLAPASAPVEPDAVPLYGAQTPGSASSEQWVKFG CCCHHEEHHHHHHHHEEEHHHCCCCCCCCCCCCCCCCCCEEEECCCCCCCCCCHHHHHCC GRDYAVRNVTRPTITPVLPDPAKATGAAVVVAPGGAFMMLAMDHEGWKVARALADRGIAA CCCEEEECCCCCCCCCCCCCCCCCCCCEEEEECCCEEEEEEECCCCHHHHHHHHHCCCEE FVLKYRLNPTPRDEAEAGRYMNEQLGREVGHPMTGDLLGKSMAPADGKAAIAWVRTNAAR EEEEEECCCCCCCHHHHHHHHHHHHHHHHCCCCCHHHHCCCCCCCCCCEEEEEEEECCHH FGIDPARVGMIGFSAGAMTTRRVGLDGDAATRPAFLGYIYGPQDAEPVPADAPPMFDAIA HCCCHHHEEEEEECCCCCEEEEECCCCCCCCCCEEEEEEECCCCCCCCCCCCCCCHHHHH LDDALFPSKGFPIAQAWLDARRPVEIHGYQKGNHGFGLGLPGTTTTLLIDQFTAWLQMQG HCCCCCCCCCCCHHHHHHCCCCCEEEECEECCCCCEECCCCCCHHHHHHHHHHHHHHHHH FLARKDSK HHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA