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The map label for this gene is 87199743

Identifier: 87199743

GI number: 87199743

Start: 1815647

End: 1816936

Strand: Direct

Name: 87199743

Synonym: Saro_1726

Alternate gene names: NA

Gene position: 1815647-1816936 (Clockwise)

Preceding gene: 87199742

Following gene: 87199744

Centisome position: 50.98

GC content: 64.57

Gene sequence:

>1290_bases
GTGACTCTCCCGATTTCCGCAGATCTCATCGCCGAACGCAACGCCCGCCACGTCGAGGCGCTCGAGGAAGATTATGCCGC
GCTCGGTCGCAAGCTTGCACGCACCGGCATCGATATCGATGCGATCAAGGATCGCGTGGCGGGCTTCTCGGTCGCCGTTC
CGTCGTGGGGCGCGGGACGCGGTGGCACGCGCTTCGCCAAGTTCCCGATCCCGGGCGAGCCGACCAACATCCATGAGAAG
CTCGAGGACTGCGCGGTCATCCAGCAGCTCTCGCGCGTCACGCCCCGCGTCTCGCCGCATTTCCCGTGGGACAAGGTGAG
CGACTACAAGGCCCTGCGCGAGGAAGCGGCAAGCCTCGGCCTTGGCTGGGATGCGGTCAACTCGAACACCTTCCAGGACC
AGGTCGGGCAGGCCCATACTTACGCCAATGGCTCGCTCTCGGCGCAGGATGCCGCGACGCGCCGTCAGGCGGTCGAACAC
AACATCGAATGCATCGAGATCGGCGTTCAGCTCGGCTCGACCGACCTGACTGTGTGGGTCGGCGACGGCACCAACTTCCC
CGGCCAGCAGGACCTTGGCCGCAGCCTCGACCGCTATCTCGATGGCGCTGCGCAGATCTATGCCGCGCTGCCCGACGACT
GGCGGATGCTGCTCGAACACAAGATGTTCGAGCCGGCCTTCTACTCGACTGTCATCAGCGACTGGGGCTCGTCCATCCTC
GCCGCGCAGGAACTCGGCCCCAAGGCCAAGTGTCTCGTCGATCTCGGCCACCATGCGCCCAACGTGAACATCGAGCAGAT
CGTCGCGCGCCTGCACCGCTTCGGAAAGCTCGGTGGCTTCCACTTCAACGACAGCAAGTACGGAGACGACGACCTCGATT
CCGGCTCGATCAATCCGCACCAGTTGTTCCTCGTATTCAACGAACTGGTCGAGGCTGAGCTCAACCCGCGGGATGGCTTC
AACCCCAGCTACATGATCGACCAGTCGCACAACGTGACCGACCCGATCGAATCCATGCTGTCTTCTGCCGAGACGATCAC
GCAGTGCTTCGCGAAGGCCCAGCTTGTGGATCGCGAGGCGCTTCACGCCGCGCAGGAAACCAACGACACGATGATGGCGT
TCCAGGCCCTGCGGCGGGCCTACAACGTCGATGTCGCGCCGATCCTTGCCAAGGCGCGCATGGAAGCGGGCGGCGCGATC
GACGTGCTCGAAGCCTACCGCACCAGCCAGTATCGCGGCCGGAAGGCGCAGGAACGCAAGGCTGTCGGCCTCGGCGCCGG
CATCGTCTGA

Upstream 100 bases:

>100_bases
GCTTCGGCCTTGGCCTGCCCGGCACCACCACCACCCTCCTGATCGACCAGTTCACCGCGTGGCTCCAGATGCAGGGCTTC
CTCGCGCGAAAGGACAGCAA

Downstream 100 bases:

>100_bases
AAGACCTGCGATCCAATCAGAAGAAACGACATCGGGAGTGAGTAGAATGAACATCCGCAACGGCCTTTCGGTCGCAACGC
TACTTGCCAGCACCACCGTG

Product: xylose isomerase-like TIM barrel domain-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 429; Mature: 428

Protein sequence:

>429_residues
MTLPISADLIAERNARHVEALEEDYAALGRKLARTGIDIDAIKDRVAGFSVAVPSWGAGRGGTRFAKFPIPGEPTNIHEK
LEDCAVIQQLSRVTPRVSPHFPWDKVSDYKALREEAASLGLGWDAVNSNTFQDQVGQAHTYANGSLSAQDAATRRQAVEH
NIECIEIGVQLGSTDLTVWVGDGTNFPGQQDLGRSLDRYLDGAAQIYAALPDDWRMLLEHKMFEPAFYSTVISDWGSSIL
AAQELGPKAKCLVDLGHHAPNVNIEQIVARLHRFGKLGGFHFNDSKYGDDDLDSGSINPHQLFLVFNELVEAELNPRDGF
NPSYMIDQSHNVTDPIESMLSSAETITQCFAKAQLVDREALHAAQETNDTMMAFQALRRAYNVDVAPILAKARMEAGGAI
DVLEAYRTSQYRGRKAQERKAVGLGAGIV

Sequences:

>Translated_429_residues
MTLPISADLIAERNARHVEALEEDYAALGRKLARTGIDIDAIKDRVAGFSVAVPSWGAGRGGTRFAKFPIPGEPTNIHEK
LEDCAVIQQLSRVTPRVSPHFPWDKVSDYKALREEAASLGLGWDAVNSNTFQDQVGQAHTYANGSLSAQDAATRRQAVEH
NIECIEIGVQLGSTDLTVWVGDGTNFPGQQDLGRSLDRYLDGAAQIYAALPDDWRMLLEHKMFEPAFYSTVISDWGSSIL
AAQELGPKAKCLVDLGHHAPNVNIEQIVARLHRFGKLGGFHFNDSKYGDDDLDSGSINPHQLFLVFNELVEAELNPRDGF
NPSYMIDQSHNVTDPIESMLSSAETITQCFAKAQLVDREALHAAQETNDTMMAFQALRRAYNVDVAPILAKARMEAGGAI
DVLEAYRTSQYRGRKAQERKAVGLGAGIV
>Mature_428_residues
TLPISADLIAERNARHVEALEEDYAALGRKLARTGIDIDAIKDRVAGFSVAVPSWGAGRGGTRFAKFPIPGEPTNIHEKL
EDCAVIQQLSRVTPRVSPHFPWDKVSDYKALREEAASLGLGWDAVNSNTFQDQVGQAHTYANGSLSAQDAATRRQAVEHN
IECIEIGVQLGSTDLTVWVGDGTNFPGQQDLGRSLDRYLDGAAQIYAALPDDWRMLLEHKMFEPAFYSTVISDWGSSILA
AQELGPKAKCLVDLGHHAPNVNIEQIVARLHRFGKLGGFHFNDSKYGDDDLDSGSINPHQLFLVFNELVEAELNPRDGFN
PSYMIDQSHNVTDPIESMLSSAETITQCFAKAQLVDREALHAAQETNDTMMAFQALRRAYNVDVAPILAKARMEAGGAID
VLEAYRTSQYRGRKAQERKAVGLGAGIV

Specific function: Unknown

COG id: COG4952

COG function: function code M; Predicted sugar isomerase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the rhamnose isomerase family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013451
- InterPro:   IPR013022
- InterPro:   IPR012307 [H]

Pfam domain/function: PF01261 AP_endonuc_2 [H]

EC number: NA

Molecular weight: Translated: 47031; Mature: 46900

Theoretical pI: Translated: 5.08; Mature: 5.08

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTLPISADLIAERNARHVEALEEDYAALGRKLARTGIDIDAIKDRVAGFSVAVPSWGAGR
CCCCCCHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCEEECCCCCCCC
GGTRFAKFPIPGEPTNIHEKLEDCAVIQQLSRVTPRVSPHFPWDKVSDYKALREEAASLG
CCCEEEECCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHCC
LGWDAVNSNTFQDQVGQAHTYANGSLSAQDAATRRQAVEHNIECIEIGVQLGSTDLTVWV
CCCCCCCCCCHHHHHCCCEECCCCCCCHHHHHHHHHHHHCCCEEEEEEEEECCCEEEEEE
GDGTNFPGQQDLGRSLDRYLDGAAQIYAALPDDWRMLLEHKMFEPAFYSTVISDWGSSIL
CCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCHHHHHHHHHHHCHHHH
AAQELGPKAKCLVDLGHHAPNVNIEQIVARLHRFGKLGGFHFNDSKYGDDDLDSGSINPH
HHHHCCCHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCCEECCCCCCCCCCCCCCCCCHH
QLFLVFNELVEAELNPRDGFNPSYMIDQSHNVTDPIESMLSSAETITQCFAKAQLVDREA
HHHHHHHHHHHHCCCCCCCCCCCEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
LHAAQETNDTMMAFQALRRAYNVDVAPILAKARMEAGGAIDVLEAYRTSQYRGRKAQERK
HHHHHHCCHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCHHHHHH
AVGLGAGIV
HHCCCCCCC
>Mature Secondary Structure 
TLPISADLIAERNARHVEALEEDYAALGRKLARTGIDIDAIKDRVAGFSVAVPSWGAGR
CCCCCHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCEEECCCCCCCC
GGTRFAKFPIPGEPTNIHEKLEDCAVIQQLSRVTPRVSPHFPWDKVSDYKALREEAASLG
CCCEEEECCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHCC
LGWDAVNSNTFQDQVGQAHTYANGSLSAQDAATRRQAVEHNIECIEIGVQLGSTDLTVWV
CCCCCCCCCCHHHHHCCCEECCCCCCCHHHHHHHHHHHHCCCEEEEEEEEECCCEEEEEE
GDGTNFPGQQDLGRSLDRYLDGAAQIYAALPDDWRMLLEHKMFEPAFYSTVISDWGSSIL
CCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCHHHHHHHHHHHCHHHH
AAQELGPKAKCLVDLGHHAPNVNIEQIVARLHRFGKLGGFHFNDSKYGDDDLDSGSINPH
HHHHCCCHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCCEECCCCCCCCCCCCCCCCCHH
QLFLVFNELVEAELNPRDGFNPSYMIDQSHNVTDPIESMLSSAETITQCFAKAQLVDREA
HHHHHHHHHHHHCCCCCCCCCCCEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
LHAAQETNDTMMAFQALRRAYNVDVAPILAKARMEAGGAIDVLEAYRTSQYRGRKAQERK
HHHHHHCCHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCHHHHHH
AVGLGAGIV
HHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 11481430 [H]