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The map label for this gene is 87199542

Identifier: 87199542

GI number: 87199542

Start: 1568798

End: 1569766

Strand: Direct

Name: 87199542

Synonym: Saro_1524

Alternate gene names: NA

Gene position: 1568798-1569766 (Clockwise)

Preceding gene: 87199541

Following gene: 87199543

Centisome position: 44.05

GC content: 58.93

Gene sequence:

>969_bases
ATGGATTTTATCCTCCAGAACGCGCTGCTTAGATCGCTCATTCTGGCGCTGTTTTTTGCGGCGACAGTCATCGCGGCCTT
CTCTGCCATCAGTTATTTTACCCGACGTGCCCAGGTGCGCGCGCATCTGCGCACTGTGTCGGTTGACAGCGGCGCCTCGA
ACGGCGCGGAAACGAGCCTTGCACAGAGCCGGTCCGGACCGTTCTGGAGCATCGTCAATGTAATCGAGCGCACAGGTCTC
AGCCTCGCCGACAGCAATCCGGACGCGCTGCGCACAAAGCTGATTGCGGCCGGCTTCGAAGCCACCGAAGCGCCGACCAT
CTATACGCTCTCCCGGCTCATCCTCGTTTTTCTCCTGCCTGCGTGTGCCATTAGCTACTTGATGCTGACGGGATCCGAAC
TCACCATCTTCAAGCTCTACATGGTCGGATCTGTCAGCGGGCTGCTCGGCCTCATCGCCCCTGCTTGGTTTGTGCGGATC
AAGGCAGATCGAAGGATGGAGGCGATAACCAACGGTTTCCCGAATTGCCTGGATCTCATCCTGGTATGCGTCGAGGCTGG
TCTCGGCATGGAAGCGGCATTCGATCGTGTCAGCCGGGAAATCGCACGTGCAGAGCCGCAGGTCGCCCACCTTCTAGTGC
GAACCAATCTCCACTTGAGGGCCGGCGCCACTCGCGAGGAAGCGTTGCACCGCATGGCAACGCTTGCTGGCGTCGACGAG
ATCAGGTCGTTTGCGACCTTGCTTATCCAGTCCGAGAAGCTTGGCACCAGCATTGGTACCACTTTGCGGGTCTTTGCGTC
CGAAATGCGCGAAAAACGCCGAATGCGGGCTGAGGAGAAGGCGCATCGCCTTCCCGTCCTGATTTCCCTTCCGCTCGTAA
CCTGCATGCTTCCCACCATGATCGGCGTGCTGATGATACCTGCCGCCATTCGCGTTGTCCGGAAACTCCTCCCTGTGATG
TTAGGATAG

Upstream 100 bases:

>100_bases
CGGGCGACCCGCTGTTCGCGACAAGTTTCGCCGGCATGATCGGTCTCTATCTCATCGGCGTGCTGTGGCTTCGCAGCATG
GTTGACCTGAAGGTGTGATG

Downstream 100 bases:

>100_bases
TCCCATGAAACGAACTGTTCTTGTCGGATGCGTTTTGGTGTCACTGGTCCCGCAACTCGCGGGTTGCACTGTTTTCAGGC
AGATCGGCTTTGCACCACAC

Product: type II secretion system protein

Products: NA

Alternate protein names: Flp Pilus Assembly Protein TadC; Type II Secretion System F Domain Protein; Type II/IV Secretion System Protein TadC Subfamily; Type II Secretion System F Domain-Containing Protein; TadC Protein; Flp Pilus Assembly Protein; Tad Secretion System Secretion Accessory Protein; Type II Secretion System F Domain; Bacterial Type II Secretion System Protein F Domain; Pilus Assembly Protein; Tight Adherence TadC-Like Transmembrane Protein; Pilus Component Protein; TadC Pilus Assembly Protein; Integral Membrane Protein; TadC Family Type II/IV Secretion System Protein; Type II Secretion System; TadC Component Of Type IV Pilus; Type II Secretion System Protein F Domain; Type II Secretion System Protein F Domain Protein; Tight Adherence TadC-Related Transmembrane Protein; Secretion System Protein TadC; Tyrosine Phenol-Lyase; Pilus Assembly Protein TadC; Putative Tight Adherence TadC-Like Transmembrane Protein; TadC Subunit; Components Of Type IV Pilus TadC; Pilus Assemble Protein; Component Of Type IV Pilus; Type II Secretion System Protein F; Type II Secretion System Integral Membrane Subunit; Component Of Pilus Protein; Components Of Type IV Pilus

Number of amino acids: Translated: 322; Mature: 322

Protein sequence:

>322_residues
MDFILQNALLRSLILALFFAATVIAAFSAISYFTRRAQVRAHLRTVSVDSGASNGAETSLAQSRSGPFWSIVNVIERTGL
SLADSNPDALRTKLIAAGFEATEAPTIYTLSRLILVFLLPACAISYLMLTGSELTIFKLYMVGSVSGLLGLIAPAWFVRI
KADRRMEAITNGFPNCLDLILVCVEAGLGMEAAFDRVSREIARAEPQVAHLLVRTNLHLRAGATREEALHRMATLAGVDE
IRSFATLLIQSEKLGTSIGTTLRVFASEMREKRRMRAEEKAHRLPVLISLPLVTCMLPTMIGVLMIPAAIRVVRKLLPVM
LG

Sequences:

>Translated_322_residues
MDFILQNALLRSLILALFFAATVIAAFSAISYFTRRAQVRAHLRTVSVDSGASNGAETSLAQSRSGPFWSIVNVIERTGL
SLADSNPDALRTKLIAAGFEATEAPTIYTLSRLILVFLLPACAISYLMLTGSELTIFKLYMVGSVSGLLGLIAPAWFVRI
KADRRMEAITNGFPNCLDLILVCVEAGLGMEAAFDRVSREIARAEPQVAHLLVRTNLHLRAGATREEALHRMATLAGVDE
IRSFATLLIQSEKLGTSIGTTLRVFASEMREKRRMRAEEKAHRLPVLISLPLVTCMLPTMIGVLMIPAAIRVVRKLLPVM
LG
>Mature_322_residues
MDFILQNALLRSLILALFFAATVIAAFSAISYFTRRAQVRAHLRTVSVDSGASNGAETSLAQSRSGPFWSIVNVIERTGL
SLADSNPDALRTKLIAAGFEATEAPTIYTLSRLILVFLLPACAISYLMLTGSELTIFKLYMVGSVSGLLGLIAPAWFVRI
KADRRMEAITNGFPNCLDLILVCVEAGLGMEAAFDRVSREIARAEPQVAHLLVRTNLHLRAGATREEALHRMATLAGVDE
IRSFATLLIQSEKLGTSIGTTLRVFASEMREKRRMRAEEKAHRLPVLISLPLVTCMLPTMIGVLMIPAAIRVVRKLLPVM
LG

Specific function: Unknown

COG id: COG2064

COG function: function code NU; Flp pilus assembly protein TadC

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 35165; Mature: 35165

Theoretical pI: Translated: 10.26; Mature: 10.26

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
3.7 %Met     (Translated Protein)
5.0 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
3.7 %Met     (Mature Protein)
5.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDFILQNALLRSLILALFFAATVIAAFSAISYFTRRAQVRAHLRTVSVDSGASNGAETSL
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCCCHHHHH
AQSRSGPFWSIVNVIERTGLSLADSNPDALRTKLIAAGFEATEAPTIYTLSRLILVFLLP
HHHCCCCHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHH
ACAISYLMLTGSELTIFKLYMVGSVSGLLGLIAPAWFVRIKADRRMEAITNGFPNCLDLI
HHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHH
LVCVEAGLGMEAAFDRVSREIARAEPQVAHLLVRTNLHLRAGATREEALHRMATLAGVDE
HHHHHHCCCHHHHHHHHHHHHHHCCHHHHHHHHHHCCCEECCCCHHHHHHHHHHHHHHHH
IRSFATLLIQSEKLGTSIGTTLRVFASEMREKRRMRAEEKAHRLPVLISLPLVTCMLPTM
HHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHH
IGVLMIPAAIRVVRKLLPVMLG
HHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MDFILQNALLRSLILALFFAATVIAAFSAISYFTRRAQVRAHLRTVSVDSGASNGAETSL
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCCCHHHHH
AQSRSGPFWSIVNVIERTGLSLADSNPDALRTKLIAAGFEATEAPTIYTLSRLILVFLLP
HHHCCCCHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHH
ACAISYLMLTGSELTIFKLYMVGSVSGLLGLIAPAWFVRIKADRRMEAITNGFPNCLDLI
HHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHH
LVCVEAGLGMEAAFDRVSREIARAEPQVAHLLVRTNLHLRAGATREEALHRMATLAGVDE
HHHHHHCCCHHHHHHHHHHHHHHCCHHHHHHHHHHCCCEECCCCHHHHHHHHHHHHHHHH
IRSFATLLIQSEKLGTSIGTTLRVFASEMREKRRMRAEEKAHRLPVLISLPLVTCMLPTM
HHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHH
IGVLMIPAAIRVVRKLLPVMLG
HHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA