Click here to switch to the map view.

The map label for this gene is 87199543

Identifier: 87199543

GI number: 87199543

Start: 1569771

End: 1570430

Strand: Direct

Name: 87199543

Synonym: Saro_1525

Alternate gene names: NA

Gene position: 1569771-1570430 (Clockwise)

Preceding gene: 87199542

Following gene: 87199544

Centisome position: 44.08

GC content: 59.7

Gene sequence:

>660_bases
ATGAAACGAACTGTTCTTGTCGGATGCGTTTTGGTGTCACTGGTCCCGCAACTCGCGGGTTGCACTGTTTTCAGGCAGAT
CGGCTTTGCACCACACAGCAAGCCCAAGGAGCATCTGGTTGTGCAAGATGCAGTCAAGGCCGACACCTTGGCGTTGAGAG
CTCGTAGCAGCACTGAGCAGCAGTTGCCGGTGCCTGCGCCGTCGGTTCTCACCAACATTGCGCGTGACCAACTCGCCGCA
GGCAATTTTGGACTGGCAATAGAGACATTCAGGCTGGCTCGCGGCGCGGGGGAACCCCTGGCGCCGGTGCTTAACGGACT
TGGCGTTGCTTATGCCCACCTTGGTCGCGCTGATCTGGCGGCCAACAATTTCCGCTTGGCTATTGCACGCGACCCAGATG
AGGAGCGCTATCGCTGGAACCTGTCGAAACTGCTTGCGCAGACGGAAATGGCCCGGGCGAGGGACCAGGTTGAATTGTAT
GTCTCTCCCGGGCCAGCCGCAGAACCAGACGTGGCTGGGCAGGCTGGCAAGCTGGTCAAAGTCTCGCCGGGCCAATTCGT
TATCCGTACCGTCAATTTCGAGAGCGCCAAGCCGGTTCGCAGCGCGGATGTCGGTTCTGTACGCAAGCGTCGCGAGACCA
AGGACGGCTTGCACGACTGA

Upstream 100 bases:

>100_bases
CTCGTAACCTGCATGCTTCCCACCATGATCGGCGTGCTGATGATACCTGCCGCCATTCGCGTTGTCCGGAAACTCCTCCC
TGTGATGTTAGGATAGTCCC

Downstream 100 bases:

>100_bases
TCTGAAAGACCGGCCAGGTTATGATTGAATCCCACCAGCAGGCGATTGCGTTCTTGTTGCTCCTTGGATTTGCCGTCGCT
GGGACGATAAGTGACGTCCG

Product: TPR repeat-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 219; Mature: 219

Protein sequence:

>219_residues
MKRTVLVGCVLVSLVPQLAGCTVFRQIGFAPHSKPKEHLVVQDAVKADTLALRARSSTEQQLPVPAPSVLTNIARDQLAA
GNFGLAIETFRLARGAGEPLAPVLNGLGVAYAHLGRADLAANNFRLAIARDPDEERYRWNLSKLLAQTEMARARDQVELY
VSPGPAAEPDVAGQAGKLVKVSPGQFVIRTVNFESAKPVRSADVGSVRKRRETKDGLHD

Sequences:

>Translated_219_residues
MKRTVLVGCVLVSLVPQLAGCTVFRQIGFAPHSKPKEHLVVQDAVKADTLALRARSSTEQQLPVPAPSVLTNIARDQLAA
GNFGLAIETFRLARGAGEPLAPVLNGLGVAYAHLGRADLAANNFRLAIARDPDEERYRWNLSKLLAQTEMARARDQVELY
VSPGPAAEPDVAGQAGKLVKVSPGQFVIRTVNFESAKPVRSADVGSVRKRRETKDGLHD
>Mature_219_residues
MKRTVLVGCVLVSLVPQLAGCTVFRQIGFAPHSKPKEHLVVQDAVKADTLALRARSSTEQQLPVPAPSVLTNIARDQLAA
GNFGLAIETFRLARGAGEPLAPVLNGLGVAYAHLGRADLAANNFRLAIARDPDEERYRWNLSKLLAQTEMARARDQVELY
VSPGPAAEPDVAGQAGKLVKVSPGQFVIRTVNFESAKPVRSADVGSVRKRRETKDGLHD

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 23591; Mature: 23591

Theoretical pI: Translated: 10.25; Mature: 10.25

Prosite motif: PS50005 TPR ; PS50293 TPR_REGION

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
0.9 %Met     (Translated Protein)
1.8 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
1.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKRTVLVGCVLVSLVPQLAGCTVFRQIGFAPHSKPKEHLVVQDAVKADTLALRARSSTEQ
CCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCC
QLPVPAPSVLTNIARDQLAAGNFGLAIETFRLARGAGEPLAPVLNGLGVAYAHLGRADLA
CCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCHHCC
ANNFRLAIARDPDEERYRWNLSKLLAQTEMARARDQVELYVSPGPAAEPDVAGQAGKLVK
CCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCCCCCEEE
VSPGQFVIRTVNFESAKPVRSADVGSVRKRRETKDGLHD
ECCCCEEEEEECCCCCCCCCCCCHHHHHHHHHHCCCCCC
>Mature Secondary Structure
MKRTVLVGCVLVSLVPQLAGCTVFRQIGFAPHSKPKEHLVVQDAVKADTLALRARSSTEQ
CCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCC
QLPVPAPSVLTNIARDQLAAGNFGLAIETFRLARGAGEPLAPVLNGLGVAYAHLGRADLA
CCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCHHCC
ANNFRLAIARDPDEERYRWNLSKLLAQTEMARARDQVELYVSPGPAAEPDVAGQAGKLVK
CCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCCCCCEEE
VSPGQFVIRTVNFESAKPVRSADVGSVRKRRETKDGLHD
ECCCCEEEEEECCCCCCCCCCCCHHHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA