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The map label for this gene is 87199541

Identifier: 87199541

GI number: 87199541

Start: 1567809

End: 1568795

Strand: Direct

Name: 87199541

Synonym: Saro_1523

Alternate gene names: NA

Gene position: 1567809-1568795 (Clockwise)

Preceding gene: 87199540

Following gene: 87199542

Centisome position: 44.02

GC content: 59.37

Gene sequence:

>987_bases
ATGACCCTCGAACTTCTCAGGTTCTTTGCCCTGTTGGCTATCTTCGTATTCGTCGTGATCGTCGTGCAGCAGGCCGCCAA
TGCAACGCTCACGCGGCAGCGCAATCGCAACGCGGTCAACAAGCGGCTGAAGCTGCTCGCGTCGGGGATGGATCGGGAAG
CGGTCACAAATCTTCTCAAGGTCAATCACGCAGGGTCTTTCAGGCGCCGCGGGATTGTCGTCCGGCTTCGCAGGATGCTT
GCCAGAACCGGCATGAGCATAACGCCGGACAGGATATTGGCGGGAATGGCCATCGCGACTGCGGTGGCCATAATACTGCT
GAGCCTTCTGGCGTTCAGTCTCGGCACCACGATAACCTTGGGTACGATTCTGCTGATTTGTGTCGTCGGCCTTGGTTTCG
GGGCCGGCATTCCCTACGTCGTTTTGAACCGTAGCGCGGAAAAGCGAAGGAAGCGGATGGAGCAGCAGTTCGCTCCCGCC
GTGGACATCTTCACGCGCGCCTTGCGAGCAGGGCATCCTGTAGCTTCGGCGATCAGCCTCCTGTCCACTGAGATGGCGGA
TCCAATCGGCACAGAGTTCGGCCTCGTCGCGGACGAGATCGCCTATGGCGCGAACCTCAATGACTCCCTGGTAGCACTTG
CGGAACGCTGGGAACTGGAAGATCTGCACATGTTCGCAGTCTGCCTGTCAGTGCAGAGCGAAACGGGCGGCAATCTGGCT
GAGATCCTTGGAAACCTTGCGTCGGTCATTCGCGACCGCGCGAGCCTTTACCAGAAGGTGCGCGCGTTGAGCTCCGAAGG
GCGGGCAAGCGCCTGGATGCTTTCGGTCCTGCCCGCACTGACGATGCTTGTCCTCTTCATGATAAACCCGAGCTTCTACC
TTGAGGTGTCGGGCGACCCGCTGTTCGCGACAAGTTTCGCCGGCATGATCGGTCTCTATCTCATCGGCGTGCTGTGGCTT
CGCAGCATGGTTGACCTGAAGGTGTGA

Upstream 100 bases:

>100_bases
TTCGAAGCGACCGGCATCCGCCCCCGGTTCGCTGCACGCCTCGAGGCGAGTGGCATCCACCTCGCCGCCGATCTATTCAA
GCCGACGATGGGGTGATCGC

Downstream 100 bases:

>100_bases
TGATGGATTTTATCCTCCAGAACGCGCTGCTTAGATCGCTCATTCTGGCGCTGTTTTTTGCGGCGACAGTCATCGCGGCC
TTCTCTGCCATCAGTTATTT

Product: type II secretion system protein

Products: NA

Alternate protein names: Flp Pilus Assembly Protein TadB; Type II Secretion System F Domain Protein; Pilus Assembly Protein; Type II Secretion System F Domain-Containing Protein; Flp Pilus Assembly Protein; TadB Protein; Integral Membrane Protein; Bacterial Type II Secretion System Protein F Domain; Pilus Assembly Protein TadB; Type II/IV Secretion System Protein TadC Subfamily; Type II Secretion System F Domain; Type II Secretion System Protein F Domain; Tad Secretion System Pilus Assembly Protein; Type II Secretion System Protein F; Secretion System Protein; Type II Secretion System; Secretion System Protein TadB; Tight Adherence TadB-Related Transmembrane Protein; Bacterial Type II Secretion System Protein F Domain Protein; Flp Pilus Assembly Protein TadC; TadB-Like Pilus Assembly Protein; Type II Secretion System F Protein; Type II/IV Secretion System Membrane Protein; Tad Secretion System Secretion Accessory Protein; Component Of Type IV Pilus; Type II Secretion System Integral Membrane Subunit; Tight Adherence TadB-Like Transmembrane Protein; Components Of Type IV Pilus; TadC Family Type II/IV Secretion System Protein

Number of amino acids: Translated: 328; Mature: 327

Protein sequence:

>328_residues
MTLELLRFFALLAIFVFVVIVVQQAANATLTRQRNRNAVNKRLKLLASGMDREAVTNLLKVNHAGSFRRRGIVVRLRRML
ARTGMSITPDRILAGMAIATAVAIILLSLLAFSLGTTITLGTILLICVVGLGFGAGIPYVVLNRSAEKRRKRMEQQFAPA
VDIFTRALRAGHPVASAISLLSTEMADPIGTEFGLVADEIAYGANLNDSLVALAERWELEDLHMFAVCLSVQSETGGNLA
EILGNLASVIRDRASLYQKVRALSSEGRASAWMLSVLPALTMLVLFMINPSFYLEVSGDPLFATSFAGMIGLYLIGVLWL
RSMVDLKV

Sequences:

>Translated_328_residues
MTLELLRFFALLAIFVFVVIVVQQAANATLTRQRNRNAVNKRLKLLASGMDREAVTNLLKVNHAGSFRRRGIVVRLRRML
ARTGMSITPDRILAGMAIATAVAIILLSLLAFSLGTTITLGTILLICVVGLGFGAGIPYVVLNRSAEKRRKRMEQQFAPA
VDIFTRALRAGHPVASAISLLSTEMADPIGTEFGLVADEIAYGANLNDSLVALAERWELEDLHMFAVCLSVQSETGGNLA
EILGNLASVIRDRASLYQKVRALSSEGRASAWMLSVLPALTMLVLFMINPSFYLEVSGDPLFATSFAGMIGLYLIGVLWL
RSMVDLKV
>Mature_327_residues
TLELLRFFALLAIFVFVVIVVQQAANATLTRQRNRNAVNKRLKLLASGMDREAVTNLLKVNHAGSFRRRGIVVRLRRMLA
RTGMSITPDRILAGMAIATAVAIILLSLLAFSLGTTITLGTILLICVVGLGFGAGIPYVVLNRSAEKRRKRMEQQFAPAV
DIFTRALRAGHPVASAISLLSTEMADPIGTEFGLVADEIAYGANLNDSLVALAERWELEDLHMFAVCLSVQSETGGNLAE
ILGNLASVIRDRASLYQKVRALSSEGRASAWMLSVLPALTMLVLFMINPSFYLEVSGDPLFATSFAGMIGLYLIGVLWLR
SMVDLKV

Specific function: Unknown

COG id: COG4965

COG function: function code U; Flp pilus assembly protein TadB

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 35696; Mature: 35565

Theoretical pI: Translated: 10.48; Mature: 10.48

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
4.0 %Met     (Translated Protein)
4.6 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
3.7 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTLELLRFFALLAIFVFVVIVVQQAANATLTRQRNRNAVNKRLKLLASGMDREAVTNLLK
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHH
VNHAGSFRRRGIVVRLRRMLARTGMSITPDRILAGMAIATAVAIILLSLLAFSLGTTITL
HCCCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
GTILLICVVGLGFGAGIPYVVLNRSAEKRRKRMEQQFAPAVDIFTRALRAGHPVASAISL
HHHHHHHHHHHCCCCCCCCEEECCCHHHHHHHHHHHHCHHHHHHHHHHHCCCHHHHHHHH
LSTEMADPIGTEFGLVADEIAYGANLNDSLVALAERWELEDLHMFAVCLSVQSETGGNLA
HHHHHCCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHCHHHHHHHHHHHHHHCCCCCCHH
EILGNLASVIRDRASLYQKVRALSSEGRASAWMLSVLPALTMLVLFMINPSFYLEVSGDP
HHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCC
LFATSFAGMIGLYLIGVLWLRSMVDLKV
HHHHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
TLELLRFFALLAIFVFVVIVVQQAANATLTRQRNRNAVNKRLKLLASGMDREAVTNLLK
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHH
VNHAGSFRRRGIVVRLRRMLARTGMSITPDRILAGMAIATAVAIILLSLLAFSLGTTITL
HCCCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
GTILLICVVGLGFGAGIPYVVLNRSAEKRRKRMEQQFAPAVDIFTRALRAGHPVASAISL
HHHHHHHHHHHCCCCCCCCEEECCCHHHHHHHHHHHHCHHHHHHHHHHHCCCHHHHHHHH
LSTEMADPIGTEFGLVADEIAYGANLNDSLVALAERWELEDLHMFAVCLSVQSETGGNLA
HHHHHCCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHCHHHHHHHHHHHHHHCCCCCCHH
EILGNLASVIRDRASLYQKVRALSSEGRASAWMLSVLPALTMLVLFMINPSFYLEVSGDP
HHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCC
LFATSFAGMIGLYLIGVLWLRSMVDLKV
HHHHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA