| Definition | Novosphingobium aromaticivorans DSM 12444 chromosome, complete genome. |
|---|---|
| Accession | NC_007794 |
| Length | 3,561,584 |
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The map label for this gene is 87199510
Identifier: 87199510
GI number: 87199510
Start: 1534155
End: 1534484
Strand: Reverse
Name: 87199510
Synonym: Saro_1491
Alternate gene names: NA
Gene position: 1534484-1534155 (Counterclockwise)
Preceding gene: 87199511
Following gene: 87199509
Centisome position: 43.08
GC content: 62.42
Gene sequence:
>330_bases ATGAAAACACTGTTCTGCATTTTCGCATCCCTGCCACTGGCCGGCTGTTCCGTTGCATCGGCTGCCCCTGACGGCCGGAC TCTGTTCGCGCAAAATTGTTCATCGTGCCACGCGGCTGGCCCCGGCCACCCTGGCACCGCACGCCTCGCCATCGATGCCG GGCCTGACTTTGCCGTACTCGAACAGCGCACCGACCTCACCCCCGAACATGTCACCATGGCGATCCGCCAAGGGTTCATG ATGATGCCCCCGTTCCGCCAGACCGAGCTTTCAGACGCCGATGTGAAAGCCATCGCTGCCTGGCTTTCGGCCCCCAAACC AAAGCGCTGA
Upstream 100 bases:
>100_bases ACGCGCTCATGAAGCTTAGCCAACGCATCAAGCGCGCACTGGACCCTTCGGGCATCATGGCCCCCGGGAAGAGTGGCATC TGGTCGGATGGAGCGTCCTC
Downstream 100 bases:
>100_bases GGTGGATACGATGACCGATCTCAATCCTCTTCTCGCCCGCCTTGCCGCCGCCGGCACGCGGATCACCGCGATCGAACGGC CCACCGACCTCGCCATGCTC
Product: cytochrome c, class I
Products: NA
Alternate protein names: P-Cresol Methylhydroxylase Subunit
Number of amino acids: Translated: 109; Mature: 109
Protein sequence:
>109_residues MKTLFCIFASLPLAGCSVASAAPDGRTLFAQNCSSCHAAGPGHPGTARLAIDAGPDFAVLEQRTDLTPEHVTMAIRQGFM MMPPFRQTELSDADVKAIAAWLSAPKPKR
Sequences:
>Translated_109_residues MKTLFCIFASLPLAGCSVASAAPDGRTLFAQNCSSCHAAGPGHPGTARLAIDAGPDFAVLEQRTDLTPEHVTMAIRQGFM MMPPFRQTELSDADVKAIAAWLSAPKPKR >Mature_109_residues MKTLFCIFASLPLAGCSVASAAPDGRTLFAQNCSSCHAAGPGHPGTARLAIDAGPDFAVLEQRTDLTPEHVTMAIRQGFM MMPPFRQTELSDADVKAIAAWLSAPKPKR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 11556; Mature: 11556
Theoretical pI: Translated: 7.97; Mature: 7.97
Prosite motif: PS51007 CYTC
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.7 %Cys (Translated Protein) 4.6 %Met (Translated Protein) 8.3 %Cys+Met (Translated Protein) 3.7 %Cys (Mature Protein) 4.6 %Met (Mature Protein) 8.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKTLFCIFASLPLAGCSVASAAPDGRTLFAQNCSSCHAAGPGHPGTARLAIDAGPDFAVL CCHHEEEEHHCCCCCCCCCCCCCCCCEEEECCCCCCCCCCCCCCCCEEEEEECCCCEEEE EQRTDLTPEHVTMAIRQGFMMMPPFRQTELSDADVKAIAAWLSAPKPKR CCCCCCCHHHHHHHHHCCEECCCCCCCCCCCCHHHHHHHHHHCCCCCCC >Mature Secondary Structure MKTLFCIFASLPLAGCSVASAAPDGRTLFAQNCSSCHAAGPGHPGTARLAIDAGPDFAVL CCHHEEEEHHCCCCCCCCCCCCCCCCEEEECCCCCCCCCCCCCCCCEEEEEECCCCEEEE EQRTDLTPEHVTMAIRQGFMMMPPFRQTELSDADVKAIAAWLSAPKPKR CCCCCCCHHHHHHHHHCCEECCCCCCCCCCCCHHHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA