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The map label for this gene is pchF [H]

Identifier: 87199509

GI number: 87199509

Start: 1532918

End: 1534144

Strand: Reverse

Name: pchF [H]

Synonym: Saro_1490

Alternate gene names: 87199509

Gene position: 1534144-1532918 (Counterclockwise)

Preceding gene: 87199510

Following gene: 87199508

Centisome position: 43.07

GC content: 62.59

Gene sequence:

>1227_bases
ATGACCGATCTCAATCCTCTTCTCGCCCGCCTTGCCGCCGCCGGCACGCGGATCACCGCGATCGAACGGCCCACCGACCT
CGCCATGCTCAAGGCTTCGCTTGCCCGCATTCGCGGGGTCAACGCCAACCATGTCGTTGCCATGGATGCCTTTGGAACGG
GCCTGGTCCTGCCCGAGAAGCAAGGTCCGGCGCAGTTGATCGACCTGACCGGCATGGCTCGCATCATCGATCTGGACGCC
GATTATGCGCTGACACTGGTCGAACCTGGCGTAACCTTCCGCCAACTGGGCGCAGAGATCACAAAAAGGCTGCTACCTTT
GTCGATCGACGCGACGGTCCATCCCGATGTCTCGGTCGCCGCCGCCACGCTTTCCCGCCAGTTCGGCTACACGCCCTATG
GCGACCGTGTGCTGATGCAGTGCGGCGCCGAGGTCGTGTTGCCCGGCGGCGACGTAGTGCGCCTCGGCATGGGTGCAGTG
CCAAAATCGCGCACATGGCAAATGTTCAAGCACAACTTCGGGCCGTACCTCGACGGGCTTTTCACCCAGTCGGACATGGG
TGTGGTTTCCCAACTCGGCCTGTGGCTTTCCCCCTTGCCGCCTGAACTGCGCGCCTTGCGGATCGAACTCGACGATAGCG
CCGCTGCGGACCAGTTGATCGACGCTCTGCGTCCGCTGCGTACTGCCAATGTCATCGCCCACAACATCGCCTTGACGAGC
GCTGCCTTCGACCGGGCCAGTTTTGGTGTACGCGGATCGGACAAAATGCTGCTGACCACGGCATTGACCGGTCTGCCCAA
AACACTCGCCGTATATTGGCCGATGATCGCGAAAATCATAGCAGAAACGCCCGGTGCACGGATGTTGCCAGACGATAACG
CGCCCGAATGGACTGCGCGCAAACACCTGCTTGCCGGTCAGGTACTACCCGGTGCACCACCGCCCGTACCTTTCATCGAT
TTCCAGGCTCCGGCCAGCAGCGGCATCTTGTCGCGGGCACACGAAGTGCTGGGCGCTACAGCCGTTGAATACTTGCTGAC
CGGGCGCACGCTCATGGCGCGGGTGCTTTCACCCGAAGACGGCCCCGGACTTGTCGCCGCGGCCGCGACGGCCGGCTTCG
GTATCGTTTCGCAATCGCTGGAGTTCGAGAGCGCGGCCCGAACGGTCCGGTCCAAGTCTGCGCTGGCACAAGTCCACAAG
CGCTTACGAGACGCACTTTACGCCTAA

Upstream 100 bases:

>100_bases
ATGATGCCCCCGTTCCGCCAGACCGAGCTTTCAGACGCCGATGTGAAAGCCATCGCTGCCTGGCTTTCGGCCCCCAAACC
AAAGCGCTGAGGTGGATACG

Downstream 100 bases:

>100_bases
AATATAAAACAGGGGGAGAAGAGAAAATGAAACTGATTACATCCACAGCATTGGCCACGATCTTCGCCATGGCGGCACCC
GCCCACGCGCAGGAACAGTC

Product: FAD linked oxidase-like protein

Products: NA

Alternate protein names: P-cresol methylhydroxylase; PCMH [H]

Number of amino acids: Translated: 408; Mature: 407

Protein sequence:

>408_residues
MTDLNPLLARLAAAGTRITAIERPTDLAMLKASLARIRGVNANHVVAMDAFGTGLVLPEKQGPAQLIDLTGMARIIDLDA
DYALTLVEPGVTFRQLGAEITKRLLPLSIDATVHPDVSVAAATLSRQFGYTPYGDRVLMQCGAEVVLPGGDVVRLGMGAV
PKSRTWQMFKHNFGPYLDGLFTQSDMGVVSQLGLWLSPLPPELRALRIELDDSAAADQLIDALRPLRTANVIAHNIALTS
AAFDRASFGVRGSDKMLLTTALTGLPKTLAVYWPMIAKIIAETPGARMLPDDNAPEWTARKHLLAGQVLPGAPPPVPFID
FQAPASSGILSRAHEVLGATAVEYLLTGRTLMARVLSPEDGPGLVAAAATAGFGIVSQSLEFESAARTVRSKSALAQVHK
RLRDALYA

Sequences:

>Translated_408_residues
MTDLNPLLARLAAAGTRITAIERPTDLAMLKASLARIRGVNANHVVAMDAFGTGLVLPEKQGPAQLIDLTGMARIIDLDA
DYALTLVEPGVTFRQLGAEITKRLLPLSIDATVHPDVSVAAATLSRQFGYTPYGDRVLMQCGAEVVLPGGDVVRLGMGAV
PKSRTWQMFKHNFGPYLDGLFTQSDMGVVSQLGLWLSPLPPELRALRIELDDSAAADQLIDALRPLRTANVIAHNIALTS
AAFDRASFGVRGSDKMLLTTALTGLPKTLAVYWPMIAKIIAETPGARMLPDDNAPEWTARKHLLAGQVLPGAPPPVPFID
FQAPASSGILSRAHEVLGATAVEYLLTGRTLMARVLSPEDGPGLVAAAATAGFGIVSQSLEFESAARTVRSKSALAQVHK
RLRDALYA
>Mature_407_residues
TDLNPLLARLAAAGTRITAIERPTDLAMLKASLARIRGVNANHVVAMDAFGTGLVLPEKQGPAQLIDLTGMARIIDLDAD
YALTLVEPGVTFRQLGAEITKRLLPLSIDATVHPDVSVAAATLSRQFGYTPYGDRVLMQCGAEVVLPGGDVVRLGMGAVP
KSRTWQMFKHNFGPYLDGLFTQSDMGVVSQLGLWLSPLPPELRALRIELDDSAAADQLIDALRPLRTANVIAHNIALTSA
AFDRASFGVRGSDKMLLTTALTGLPKTLAVYWPMIAKIIAETPGARMLPDDNAPEWTARKHLLAGQVLPGAPPPVPFIDF
QAPASSGILSRAHEVLGATAVEYLLTGRTLMARVLSPEDGPGLVAAAATAGFGIVSQSLEFESAARTVRSKSALAQVHKR
LRDALYA

Specific function: Unknown

COG id: COG0277

COG function: function code C; FAD/FMN-containing dehydrogenases

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 FAD-binding PCMH-type domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR016166
- InterPro:   IPR016167
- InterPro:   IPR016164
- InterPro:   IPR016168
- InterPro:   IPR004113
- InterPro:   IPR006094
- InterPro:   IPR016170
- InterPro:   IPR016171 [H]

Pfam domain/function: PF02913 FAD-oxidase_C; PF01565 FAD_binding_4 [H]

EC number: =1.17.99.1 [H]

Molecular weight: Translated: 43403; Mature: 43272

Theoretical pI: Translated: 7.79; Mature: 7.79

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTDLNPLLARLAAAGTRITAIERPTDLAMLKASLARIRGVNANHVVAMDAFGTGLVLPEK
CCCHHHHHHHHHHCCCEEEEECCCHHHHHHHHHHHHHCCCCCCCEEEEECCCCCEEEECC
QGPAQLIDLTGMARIIDLDADYALTLVEPGVTFRQLGAEITKRLLPLSIDATVHPDVSVA
CCCHHHHHHCCCEEEEECCCCCEEEEECCCCHHHHHHHHHHHHHCCEEECCEECCCHHHH
AATLSRQFGYTPYGDRVLMQCGAEVVLPGGDVVRLGMGAVPKSRTWQMFKHNFGPYLDGL
HHHHHHHCCCCCCCCHHHHHCCCEEEECCCCEEEECCCCCCCCHHHHHHHHCCCCHHHHH
FTQSDMGVVSQLGLWLSPLPPELRALRIELDDSAAADQLIDALRPLRTANVIAHNIALTS
HCCCHHHHHHHHHHHCCCCCCCCEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
AAFDRASFGVRGSDKMLLTTALTGLPKTLAVYWPMIAKIIAETPGARMLPDDNAPEWTAR
HHHHHHHCCCCCCCCEEEEHHHHCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHH
KHLLAGQVLPGAPPPVPFIDFQAPASSGILSRAHEVLGATAVEYLLTGRTLMARVLSPED
HHHHHCCCCCCCCCCCCEEECCCCCCCHHHHHHHHHHHHHHHHHHHHCHHHHHHHCCCCC
GPGLVAAAATAGFGIVSQSLEFESAARTVRSKSALAQVHKRLRDALYA
CCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
TDLNPLLARLAAAGTRITAIERPTDLAMLKASLARIRGVNANHVVAMDAFGTGLVLPEK
CCHHHHHHHHHHCCCEEEEECCCHHHHHHHHHHHHHCCCCCCCEEEEECCCCCEEEECC
QGPAQLIDLTGMARIIDLDADYALTLVEPGVTFRQLGAEITKRLLPLSIDATVHPDVSVA
CCCHHHHHHCCCEEEEECCCCCEEEEECCCCHHHHHHHHHHHHHCCEEECCEECCCHHHH
AATLSRQFGYTPYGDRVLMQCGAEVVLPGGDVVRLGMGAVPKSRTWQMFKHNFGPYLDGL
HHHHHHHCCCCCCCCHHHHHCCCEEEECCCCEEEECCCCCCCCHHHHHHHHCCCCHHHHH
FTQSDMGVVSQLGLWLSPLPPELRALRIELDDSAAADQLIDALRPLRTANVIAHNIALTS
HCCCHHHHHHHHHHHCCCCCCCCEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
AAFDRASFGVRGSDKMLLTTALTGLPKTLAVYWPMIAKIIAETPGARMLPDDNAPEWTAR
HHHHHHHCCCCCCCCEEEEHHHHCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHH
KHLLAGQVLPGAPPPVPFIDFQAPASSGILSRAHEVLGATAVEYLLTGRTLMARVLSPED
HHHHHCCCCCCCCCCCCEEECCCCCCCHHHHHHHHHHHHHHHHHHHHCHHHHHHHCCCCC
GPGLVAAAATAGFGIVSQSLEFESAARTVRSKSALAQVHKRLRDALYA
CCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 7929007; 10565539; 3790500; 1846290; 10623531 [H]