The gene/protein map for NC_011146 is currently unavailable.
Definition Novosphingobium aromaticivorans DSM 12444 chromosome, complete genome.
Accession NC_007794
Length 3,561,584

Click here to switch to the map view.

The map label for this gene is 87199469

Identifier: 87199469

GI number: 87199469

Start: 1492815

End: 1493807

Strand: Reverse

Name: 87199469

Synonym: Saro_1448

Alternate gene names: NA

Gene position: 1493807-1492815 (Counterclockwise)

Preceding gene: 87199470

Following gene: 87199468

Centisome position: 41.94

GC content: 62.34

Gene sequence:

>993_bases
ATGTCGTTAGTTTCTTTCCTTGCCGCGGCCATCGCCGCCGCTTCAACCCCAAACAGCAATTCCCCGGCGCTTTCGCCGGC
AGAAATCGTTGCTGCCGCCCCTGCCACGGACTGGCTCGCGATCGCGCCGGACGACCTTCTGGTCATGGATCTTGCGCCGG
ATGCGGCAGGACGTCCGCGCCGCGTGGTGATTCAGGTGGTGCCCGATCCCTTCTCGCAGGGATGGGTCGGCAACATGCGC
ATTCTGGCTGCTGCGCACTGGTGGGACGGAACGTCAGTCTACCGCGTCCAGGACAACTGGGTGGCACAATGGGGAGATGC
CGATGGGGAGGACGCCGCGAAGGCCCGCCCCCTTCCGCCGGGGCTCGAAGTCGTGCCCGAAAAACGATACGTCATACGCC
CGGAGGGGCCGGAACGCAGCGCGACGCACGAAGAACTGGATACCTGGCTTGCCACAATCGAGGGAACCCATGCTGCATGG
CACGCTCTGATGCGCAAGAAATCCAAGGATACCGACCCTTATGCGGATGAGACGTTCTTCTATCGCGGATGGCCGCTAGC
CGCATCGCAAAACGGACCAAGCGCGTGGCCACTACATTGCTACGGAACCGTTGGCGTAGCGCGCAACCTTTCGCCCGATA
CCGGCACCGGTTCCGAACTGTATGCCGTAATAGGCCATGCCCCCCGCCAGCTCGATCGCAACATCGCCGTCGTCGGCAGA
GTGATCGAGGGCATTCAACATCTTTCATCATTAACCCGCGGCCCCGCACCGATGGGCGTCTACTCAAACCCCGAGGAGCG
CACACCGATAGTGTCCGTCCGCCTCGCAACCGAGGTGCCGGACCTTGGCCGCTTCGAATACCTTTCCACCGAGAGCGCAT
CGTTCCGGCAGTATGCGGAAGCCAGCGCGAACCGGCGTGATCCGTTCTTCATCCAGCCTGCGGGCGGCATAGACATCTGT
AACCTGAAAGTTCCTGTCAGGCGGGGCATTTGA

Upstream 100 bases:

>100_bases
CAAAACGTGAATCAGGCGATCAACCAAATCGCTCTGGAGGGTGCCCCCTAGCTGTACGCGCGCGCTTTCGCAAGCCACCG
GTTCCTGCAATGATGCGCAA

Downstream 100 bases:

>100_bases
TCCGATGCACAGCCTGACGGTCGTTCTCTGGCGCTGGAGCGGGAGCACAAACGGCGATTGGTTCTTTGTCGGCGTCAACG
GACCGGTAGCCGATGCACTT

Product: peptidyl-prolyl cis-trans isomerase

Products: NA

Alternate protein names: Peptidyl-Prolyl Cis-Trans Isomerase Cyclophilin Type; Peptidyl-Prolyl Cis-Trans Isomerase Cyclophilin-Type; Peptidyl-Prolyl Cis-Trans Isomerase Family Protein

Number of amino acids: Translated: 330; Mature: 329

Protein sequence:

>330_residues
MSLVSFLAAAIAAASTPNSNSPALSPAEIVAAAPATDWLAIAPDDLLVMDLAPDAAGRPRRVVIQVVPDPFSQGWVGNMR
ILAAAHWWDGTSVYRVQDNWVAQWGDADGEDAAKARPLPPGLEVVPEKRYVIRPEGPERSATHEELDTWLATIEGTHAAW
HALMRKKSKDTDPYADETFFYRGWPLAASQNGPSAWPLHCYGTVGVARNLSPDTGTGSELYAVIGHAPRQLDRNIAVVGR
VIEGIQHLSSLTRGPAPMGVYSNPEERTPIVSVRLATEVPDLGRFEYLSTESASFRQYAEASANRRDPFFIQPAGGIDIC
NLKVPVRRGI

Sequences:

>Translated_330_residues
MSLVSFLAAAIAAASTPNSNSPALSPAEIVAAAPATDWLAIAPDDLLVMDLAPDAAGRPRRVVIQVVPDPFSQGWVGNMR
ILAAAHWWDGTSVYRVQDNWVAQWGDADGEDAAKARPLPPGLEVVPEKRYVIRPEGPERSATHEELDTWLATIEGTHAAW
HALMRKKSKDTDPYADETFFYRGWPLAASQNGPSAWPLHCYGTVGVARNLSPDTGTGSELYAVIGHAPRQLDRNIAVVGR
VIEGIQHLSSLTRGPAPMGVYSNPEERTPIVSVRLATEVPDLGRFEYLSTESASFRQYAEASANRRDPFFIQPAGGIDIC
NLKVPVRRGI
>Mature_329_residues
SLVSFLAAAIAAASTPNSNSPALSPAEIVAAAPATDWLAIAPDDLLVMDLAPDAAGRPRRVVIQVVPDPFSQGWVGNMRI
LAAAHWWDGTSVYRVQDNWVAQWGDADGEDAAKARPLPPGLEVVPEKRYVIRPEGPERSATHEELDTWLATIEGTHAAWH
ALMRKKSKDTDPYADETFFYRGWPLAASQNGPSAWPLHCYGTVGVARNLSPDTGTGSELYAVIGHAPRQLDRNIAVVGRV
IEGIQHLSSLTRGPAPMGVYSNPEERTPIVSVRLATEVPDLGRFEYLSTESASFRQYAEASANRRDPFFIQPAGGIDICN
LKVPVRRGI

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 35808; Mature: 35676

Theoretical pI: Translated: 5.39; Mature: 5.39

Prosite motif: PS50072 CSA_PPIASE_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
1.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSLVSFLAAAIAAASTPNSNSPALSPAEIVAAAPATDWLAIAPDDLLVMDLAPDAAGRPR
CHHHHHHHHHHHHCCCCCCCCCCCCHHHHEEECCCCCEEEECCCCEEEEEECCCCCCCCC
RVVIQVVPDPFSQGWVGNMRILAAAHWWDGTSVYRVQDNWVAQWGDADGEDAAKARPLPP
EEEEEECCCCCCCCCCCCEEEEEEEEECCCCEEEEEECCEEEECCCCCCCCHHHCCCCCC
GLEVVPEKRYVIRPEGPERSATHEELDTWLATIEGTHAAWHALMRKKSKDTDPYADETFF
CCEECCCCEEEECCCCCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCCCCCCCEE
YRGWPLAASQNGPSAWPLHCYGTVGVARNLSPDTGTGSELYAVIGHAPRQLDRNIAVVGR
EECCCEECCCCCCCCCCEEEEEECCHHCCCCCCCCCCCCEEEEECCCHHHHCCHHHHHHH
VIEGIQHLSSLTRGPAPMGVYSNPEERTPIVSVRLATEVPDLGRFEYLSTESASFRQYAE
HHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEEEECCCCCCCCEEEECCCCHHHHHHHH
ASANRRDPFFIQPAGGIDICNLKVPVRRGI
HCCCCCCCEEEECCCCEEEEEEECCHHCCC
>Mature Secondary Structure 
SLVSFLAAAIAAASTPNSNSPALSPAEIVAAAPATDWLAIAPDDLLVMDLAPDAAGRPR
HHHHHHHHHHHHCCCCCCCCCCCCHHHHEEECCCCCEEEECCCCEEEEEECCCCCCCCC
RVVIQVVPDPFSQGWVGNMRILAAAHWWDGTSVYRVQDNWVAQWGDADGEDAAKARPLPP
EEEEEECCCCCCCCCCCCEEEEEEEEECCCCEEEEEECCEEEECCCCCCCCHHHCCCCCC
GLEVVPEKRYVIRPEGPERSATHEELDTWLATIEGTHAAWHALMRKKSKDTDPYADETFF
CCEECCCCEEEECCCCCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCCCCCCCEE
YRGWPLAASQNGPSAWPLHCYGTVGVARNLSPDTGTGSELYAVIGHAPRQLDRNIAVVGR
EECCCEECCCCCCCCCCEEEEEECCHHCCCCCCCCCCCCEEEEECCCHHHHCCHHHHHHH
VIEGIQHLSSLTRGPAPMGVYSNPEERTPIVSVRLATEVPDLGRFEYLSTESASFRQYAE
HHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEEEECCCCCCCCEEEECCCCHHHHHHHH
ASANRRDPFFIQPAGGIDICNLKVPVRRGI
HCCCCCCCEEEECCCCEEEEEEECCHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA