| Definition | Novosphingobium aromaticivorans DSM 12444 chromosome, complete genome. |
|---|---|
| Accession | NC_007794 |
| Length | 3,561,584 |
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The map label for this gene is 87199468
Identifier: 87199468
GI number: 87199468
Start: 1492505
End: 1492810
Strand: Reverse
Name: 87199468
Synonym: Saro_1447
Alternate gene names: NA
Gene position: 1492810-1492505 (Counterclockwise)
Preceding gene: 87199469
Following gene: 87199463
Centisome position: 41.91
GC content: 61.11
Gene sequence:
>306_bases ATGCACAGCCTGACGGTCGTTCTCTGGCGCTGGAGCGGGAGCACAAACGGCGATTGGTTCTTTGTCGGCGTCAACGGACC GGTAGCCGATGCACTTTCCGGAACCGCGCTGATGCAGCGTCTCGAAACGGGCCGAAGATCGGGCTGGGGTTCGGTCAAAG TCCAGGCAACAATAGGACGCACCACGTGGAGTACCTCTGCCTTCCCGAGCCGGGAACACGGCTGGATCATTCCCGTCAAG GCGACCGTACGCAAGGCGGAGAGCCTTACCGAAGGGACGGAGTGCCTCCTGCAGATTGCATTCTGA
Upstream 100 bases:
>100_bases GAAGCCAGCGCGAACCGGCGTGATCCGTTCTTCATCCAGCCTGCGGGCGGCATAGACATCTGTAACCTGAAAGTTCCTGT CAGGCGGGGCATTTGATCCG
Downstream 100 bases:
>100_bases CAGGTTTCCGCGCTGCCCCGGGGCTCTGACAGCGCGGAAGATGGACAAACTGCATCCGCCTGCCGGGATCATGCCTCCCG CCTCGTCCGCATACACCGGG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 101; Mature: 101
Protein sequence:
>101_residues MHSLTVVLWRWSGSTNGDWFFVGVNGPVADALSGTALMQRLETGRRSGWGSVKVQATIGRTTWSTSAFPSREHGWIIPVK ATVRKAESLTEGTECLLQIAF
Sequences:
>Translated_101_residues MHSLTVVLWRWSGSTNGDWFFVGVNGPVADALSGTALMQRLETGRRSGWGSVKVQATIGRTTWSTSAFPSREHGWIIPVK ATVRKAESLTEGTECLLQIAF >Mature_101_residues MHSLTVVLWRWSGSTNGDWFFVGVNGPVADALSGTALMQRLETGRRSGWGSVKVQATIGRTTWSTSAFPSREHGWIIPVK ATVRKAESLTEGTECLLQIAF
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 11051; Mature: 11051
Theoretical pI: Translated: 10.47; Mature: 10.47
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MHSLTVVLWRWSGSTNGDWFFVGVNGPVADALSGTALMQRLETGRRSGWGSVKVQATIGR CCCEEEEEEEECCCCCCCEEEEECCCCHHHHHHHHHHHHHHHHCCCCCCCEEEEEEEECC TTWSTSAFPSREHGWIIPVKATVRKAESLTEGTECLLQIAF CCCCCCCCCCCCCCEEEEHHHHHHHHHHHCCCCEEEEEECC >Mature Secondary Structure MHSLTVVLWRWSGSTNGDWFFVGVNGPVADALSGTALMQRLETGRRSGWGSVKVQATIGR CCCEEEEEEEECCCCCCCEEEEECCCCHHHHHHHHHHHHHHHHCCCCCCCEEEEEEEECC TTWSTSAFPSREHGWIIPVKATVRKAESLTEGTECLLQIAF CCCCCCCCCCCCCCEEEEHHHHHHHHHHHCCCCEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA