Definition Novosphingobium aromaticivorans DSM 12444 chromosome, complete genome.
Accession NC_007794
Length 3,561,584

Click here to switch to the map view.

The map label for this gene is 87199468

Identifier: 87199468

GI number: 87199468

Start: 1492505

End: 1492810

Strand: Reverse

Name: 87199468

Synonym: Saro_1447

Alternate gene names: NA

Gene position: 1492810-1492505 (Counterclockwise)

Preceding gene: 87199469

Following gene: 87199463

Centisome position: 41.91

GC content: 61.11

Gene sequence:

>306_bases
ATGCACAGCCTGACGGTCGTTCTCTGGCGCTGGAGCGGGAGCACAAACGGCGATTGGTTCTTTGTCGGCGTCAACGGACC
GGTAGCCGATGCACTTTCCGGAACCGCGCTGATGCAGCGTCTCGAAACGGGCCGAAGATCGGGCTGGGGTTCGGTCAAAG
TCCAGGCAACAATAGGACGCACCACGTGGAGTACCTCTGCCTTCCCGAGCCGGGAACACGGCTGGATCATTCCCGTCAAG
GCGACCGTACGCAAGGCGGAGAGCCTTACCGAAGGGACGGAGTGCCTCCTGCAGATTGCATTCTGA

Upstream 100 bases:

>100_bases
GAAGCCAGCGCGAACCGGCGTGATCCGTTCTTCATCCAGCCTGCGGGCGGCATAGACATCTGTAACCTGAAAGTTCCTGT
CAGGCGGGGCATTTGATCCG

Downstream 100 bases:

>100_bases
CAGGTTTCCGCGCTGCCCCGGGGCTCTGACAGCGCGGAAGATGGACAAACTGCATCCGCCTGCCGGGATCATGCCTCCCG
CCTCGTCCGCATACACCGGG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 101; Mature: 101

Protein sequence:

>101_residues
MHSLTVVLWRWSGSTNGDWFFVGVNGPVADALSGTALMQRLETGRRSGWGSVKVQATIGRTTWSTSAFPSREHGWIIPVK
ATVRKAESLTEGTECLLQIAF

Sequences:

>Translated_101_residues
MHSLTVVLWRWSGSTNGDWFFVGVNGPVADALSGTALMQRLETGRRSGWGSVKVQATIGRTTWSTSAFPSREHGWIIPVK
ATVRKAESLTEGTECLLQIAF
>Mature_101_residues
MHSLTVVLWRWSGSTNGDWFFVGVNGPVADALSGTALMQRLETGRRSGWGSVKVQATIGRTTWSTSAFPSREHGWIIPVK
ATVRKAESLTEGTECLLQIAF

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 11051; Mature: 11051

Theoretical pI: Translated: 10.47; Mature: 10.47

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MHSLTVVLWRWSGSTNGDWFFVGVNGPVADALSGTALMQRLETGRRSGWGSVKVQATIGR
CCCEEEEEEEECCCCCCCEEEEECCCCHHHHHHHHHHHHHHHHCCCCCCCEEEEEEEECC
TTWSTSAFPSREHGWIIPVKATVRKAESLTEGTECLLQIAF
CCCCCCCCCCCCCCEEEEHHHHHHHHHHHCCCCEEEEEECC
>Mature Secondary Structure
MHSLTVVLWRWSGSTNGDWFFVGVNGPVADALSGTALMQRLETGRRSGWGSVKVQATIGR
CCCEEEEEEEECCCCCCCEEEEECCCCHHHHHHHHHHHHHHHHCCCCCCCEEEEEEEECC
TTWSTSAFPSREHGWIIPVKATVRKAESLTEGTECLLQIAF
CCCCCCCCCCCCCCEEEEHHHHHHHHHHHCCCCEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA