| Definition | Novosphingobium aromaticivorans DSM 12444 chromosome, complete genome. |
|---|---|
| Accession | NC_007794 |
| Length | 3,561,584 |
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The map label for this gene is 87199363
Identifier: 87199363
GI number: 87199363
Start: 1383792
End: 1384439
Strand: Direct
Name: 87199363
Synonym: Saro_1342
Alternate gene names: NA
Gene position: 1383792-1384439 (Clockwise)
Preceding gene: 87199362
Following gene: 87199364
Centisome position: 38.85
GC content: 67.9
Gene sequence:
>648_bases GTGCCGAAGCGTCTTGCGCCTGCTCGTCGCCACGACTTTGCCGAGTGTTCCCGCTTCCCCTTGGGCCCCATTGCATTGCA TCCGCTTCGCGCCCAGCAGGGAGGCGTGAGCCACGCAGCAATCCCTTCCGCCCCCCTGATCGTGACGGCCGAGCTTCCGC CACCGATCCAGCGATGGGCCAGCGCCCTGCGCGCCGCGCATTTTCCGCCTGAACGCAATTTCCTCCAGGCGCACGTCACG CTTTTCCATGCGCTGCCCGTGGTGCTGCTTGAAGAGGCGCGCGCGTTGCTGTCAGGCCTCGCAGCCGGCCATGCTCCGGT CGAGGCGCGCCTGGTCGGCATCATGGACCTTGGTGGAGGCACGGCACTGCGACTGGAGAGCCCGGGCATGCTGGCGCTGC GCGAGCGGATCGCGGATCATTTCCACGGTATGCTCACCGCGCAGGACAGCCATGCGCCCCGCCTGCACGTGACGGTCCAG AACAAGGTGGCACGGGCCGATGCAATTGCCTTGCAGCAGCGCCTGTCGGGCGAGATTGCCCGGCAGTCCTTCGCCTTCAC CGGGCTTGCGTTGCACCACTACGCGGGCGGGCCGTGGACGCCGGCTGGTGGTTGGGCCTTTCGCGGGAAGGTTCGCGTGG GCTCTTGA
Upstream 100 bases:
>100_bases GGGGAATTTCCTGTTTCTTAACCAAACCCCGCGTATCCCTACTGGCGGAGGCACTGGGGCCGGAGCTTGCTCCGCCCGGA ATCCGGGGAACACTGCGGCT
Downstream 100 bases:
>100_bases TTGCTGGAGGCCATGCGGGCATCGGCGGGTGGCACAGTGCGCGAGGGACAGGACGATGAGCGATCCGCAGTGGTATTCGA CGGGGCGCGACCACGTCTGG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 215; Mature: 214
Protein sequence:
>215_residues MPKRLAPARRHDFAECSRFPLGPIALHPLRAQQGGVSHAAIPSAPLIVTAELPPPIQRWASALRAAHFPPERNFLQAHVT LFHALPVVLLEEARALLSGLAAGHAPVEARLVGIMDLGGGTALRLESPGMLALRERIADHFHGMLTAQDSHAPRLHVTVQ NKVARADAIALQQRLSGEIARQSFAFTGLALHHYAGGPWTPAGGWAFRGKVRVGS
Sequences:
>Translated_215_residues MPKRLAPARRHDFAECSRFPLGPIALHPLRAQQGGVSHAAIPSAPLIVTAELPPPIQRWASALRAAHFPPERNFLQAHVT LFHALPVVLLEEARALLSGLAAGHAPVEARLVGIMDLGGGTALRLESPGMLALRERIADHFHGMLTAQDSHAPRLHVTVQ NKVARADAIALQQRLSGEIARQSFAFTGLALHHYAGGPWTPAGGWAFRGKVRVGS >Mature_214_residues PKRLAPARRHDFAECSRFPLGPIALHPLRAQQGGVSHAAIPSAPLIVTAELPPPIQRWASALRAAHFPPERNFLQAHVTL FHALPVVLLEEARALLSGLAAGHAPVEARLVGIMDLGGGTALRLESPGMLALRERIADHFHGMLTAQDSHAPRLHVTVQN KVARADAIALQQRLSGEIARQSFAFTGLALHHYAGGPWTPAGGWAFRGKVRVGS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 23066; Mature: 22935
Theoretical pI: Translated: 11.66; Mature: 11.66
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPKRLAPARRHDFAECSRFPLGPIALHPLRAQQGGVSHAAIPSAPLIVTAELPPPIQRWA CCCCCCCHHHCCHHHHHCCCCCCCEECCCCCCCCCCCCCCCCCCCEEEEECCCCHHHHHH SALRAAHFPPERNFLQAHVTLFHALPVVLLEEARALLSGLAAGHAPVEARLVGIMDLGGG HHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEEEECCCC TALRLESPGMLALRERIADHFHGMLTAQDSHAPRLHVTVQNKVARADAIALQQRLSGEIA EEEEECCCCHHHHHHHHHHHHHCEEEECCCCCCEEEEEECCHHHHHHHHHHHHHHHHHHH RQSFAFTGLALHHYAGGPWTPAGGWAFRGKVRVGS HHHHHHHHHHEECCCCCCCCCCCCCEEEEEEEECC >Mature Secondary Structure PKRLAPARRHDFAECSRFPLGPIALHPLRAQQGGVSHAAIPSAPLIVTAELPPPIQRWA CCCCCCHHHCCHHHHHCCCCCCCEECCCCCCCCCCCCCCCCCCCEEEEECCCCHHHHHH SALRAAHFPPERNFLQAHVTLFHALPVVLLEEARALLSGLAAGHAPVEARLVGIMDLGGG HHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEEEECCCC TALRLESPGMLALRERIADHFHGMLTAQDSHAPRLHVTVQNKVARADAIALQQRLSGEIA EEEEECCCCHHHHHHHHHHHHHCEEEECCCCCCEEEEEECCHHHHHHHHHHHHHHHHHHH RQSFAFTGLALHHYAGGPWTPAGGWAFRGKVRVGS HHHHHHHHHHEECCCCCCCCCCCCCEEEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA