| Definition | Novosphingobium aromaticivorans DSM 12444 chromosome, complete genome. |
|---|---|
| Accession | NC_007794 |
| Length | 3,561,584 |
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The map label for this gene is yceG [C]
Identifier: 87199362
GI number: 87199362
Start: 1382689
End: 1383666
Strand: Direct
Name: yceG [C]
Synonym: Saro_1341
Alternate gene names: 87199362
Gene position: 1382689-1383666 (Clockwise)
Preceding gene: 87199361
Following gene: 87199363
Centisome position: 38.82
GC content: 66.67
Gene sequence:
>978_bases ATGGCCCGCCGCCGCCGATCCAGATTGCCGCTGCTGGCGGCGGCCCTTGTCGTGCTGGTCGTGGCGGCGTGGCTCGTCGG CGGCTGGTTCTCGTCTGGCCCGCTGGAAAAGCAGCTCGAATTCGACGTGGGCGAAGGCGAGGGGCTGAGCGCGCTTTCGG ACGATCTGGAGGCGCAGGGCGCCATCGGTTCGGCCACGCTGTTCAAGCTGCGCGCACGGCTGCTGGGCGGCGGCACCGAA ATCAAGACCGGTTCGTTCCTGATCCCCAAGCGCGCGAGCGAAGCTACGATCCTTGAAATCCTCAAGGGCGACAAGGTCAT CCGCCGCCTGATCACCATCCCCGAAGGCATGCCGTCGATCATGGTGGCCGAGCGTCTGCGCGCCGTGGATGGCCTGACCG GCGATGTCGCGGTGCCCGAGGAAGGTTCGGTGCTGCCCGACAGCTACGACTGGCAGAAGGGTGAAAGCCGCGCCGCCGTG GTCAAGCGGATGCAGGCGGCAATGGACAAGACCCTGGCCGAACTCTGGGCAAAGCGATCGCCGCGCACGGTCGCCAAGAC GCCGCAGGAGGCGCTGGTGCTGGCATCGATCGTCGAGAAGGAAACGGGCAAGCCCGAGGAGCGGCGCATGGTTGCCGGCC TCTACTCCAATCGCCTGCGCCAGCGCATGCTGCTTCAGGCCGACCCGACGATCATCTATCCGATCACCGGGGGCAAGCCG CTCGGCCGCCGCATCCGCCAGTCCGAGATCCAGGCGGTGAACGGCTACAACACCTATACGATGATCGGCCTGCCCAAGGG CCCGATCACCAATCCGGGGCGCGATTCCATCGCGGCGGTGCTCGACCCGGCGGAGACCGATGCGCTGTTCATGGTGGCCG ACGGTACCGGCGGGCACGTTTTCGCGAGCACGCTGCAGGAACACAATGCCAATGTTGCCAAGTGGTTCGCCATCCGCAAG GCTCGCGGCGAGATCTGA
Upstream 100 bases:
>100_bases AAGCCCCGCAAGGTGCGCGCGGCGCTGAACAATTCGTTCGGCTTTGGCGGCACCAATGCCAGTGTGATCGTCAAGGCGGT CGAAGACTGAGGCAGGCAAG
Downstream 100 bases:
>100_bases TTCCCGCGAATTCCGCCATTCCGGCGGGGAATTTCCTGTTTCTTAACCAAACCCCGCGTATCCCTACTGGCGGAGGCACT GGGGCCGGAGCTTGCTCCGC
Product: aminodeoxychorismate lyase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 325; Mature: 324
Protein sequence:
>325_residues MARRRRSRLPLLAAALVVLVVAAWLVGGWFSSGPLEKQLEFDVGEGEGLSALSDDLEAQGAIGSATLFKLRARLLGGGTE IKTGSFLIPKRASEATILEILKGDKVIRRLITIPEGMPSIMVAERLRAVDGLTGDVAVPEEGSVLPDSYDWQKGESRAAV VKRMQAAMDKTLAELWAKRSPRTVAKTPQEALVLASIVEKETGKPEERRMVAGLYSNRLRQRMLLQADPTIIYPITGGKP LGRRIRQSEIQAVNGYNTYTMIGLPKGPITNPGRDSIAAVLDPAETDALFMVADGTGGHVFASTLQEHNANVAKWFAIRK ARGEI
Sequences:
>Translated_325_residues MARRRRSRLPLLAAALVVLVVAAWLVGGWFSSGPLEKQLEFDVGEGEGLSALSDDLEAQGAIGSATLFKLRARLLGGGTE IKTGSFLIPKRASEATILEILKGDKVIRRLITIPEGMPSIMVAERLRAVDGLTGDVAVPEEGSVLPDSYDWQKGESRAAV VKRMQAAMDKTLAELWAKRSPRTVAKTPQEALVLASIVEKETGKPEERRMVAGLYSNRLRQRMLLQADPTIIYPITGGKP LGRRIRQSEIQAVNGYNTYTMIGLPKGPITNPGRDSIAAVLDPAETDALFMVADGTGGHVFASTLQEHNANVAKWFAIRK ARGEI >Mature_324_residues ARRRRSRLPLLAAALVVLVVAAWLVGGWFSSGPLEKQLEFDVGEGEGLSALSDDLEAQGAIGSATLFKLRARLLGGGTEI KTGSFLIPKRASEATILEILKGDKVIRRLITIPEGMPSIMVAERLRAVDGLTGDVAVPEEGSVLPDSYDWQKGESRAAVV KRMQAAMDKTLAELWAKRSPRTVAKTPQEALVLASIVEKETGKPEERRMVAGLYSNRLRQRMLLQADPTIIYPITGGKPL GRRIRQSEIQAVNGYNTYTMIGLPKGPITNPGRDSIAAVLDPAETDALFMVADGTGGHVFASTLQEHNANVAKWFAIRKA RGEI
Specific function: Unknown
COG id: COG1559
COG function: function code R; Predicted periplasmic solute-binding protein
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0755 family [H]
Homologues:
Organism=Escherichia coli, GI1787339, Length=299, Percent_Identity=30.7692307692308, Blast_Score=139, Evalue=2e-34,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003770 [H]
Pfam domain/function: PF02618 ADC_lyase [H]
EC number: NA
Molecular weight: Translated: 35205; Mature: 35074
Theoretical pI: Translated: 10.17; Mature: 10.17
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MARRRRSRLPLLAAALVVLVVAAWLVGGWFSSGPLEKQLEFDVGEGEGLSALSDDLEAQG CCCCHHHCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEECCCCCCCHHHHHHHHHCC AIGSATLFKLRARLLGGGTEIKTGSFLIPKRASEATILEILKGDKVIRRLITIPEGMPSI CCCHHHHHHHHHHHHCCCCEECCCCEECCCCCCHHHHHHHHHHHHHHHHHHHCCCCCHHH MVAERLRAVDGLTGDVAVPEEGSVLPDSYDWQKGESRAAVVKRMQAAMDKTLAELWAKRS HHHHHHHHHCCCCCCEECCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCC PRTVAKTPQEALVLASIVEKETGKPEERRMVAGLYSNRLRQRMLLQADPTIIYPITGGKP CCHHHCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCH LGRRIRQSEIQAVNGYNTYTMIGLPKGPITNPGRDSIAAVLDPAETDALFMVADGTGGHV HHHHHHHHHHHEECCCCEEEEEECCCCCCCCCCCCCHHHHCCCCCCCEEEEEECCCCCHH FASTLQEHNANVAKWFAIRKARGEI HHHHHHHHCCCHHHHHHHHHHCCCC >Mature Secondary Structure ARRRRSRLPLLAAALVVLVVAAWLVGGWFSSGPLEKQLEFDVGEGEGLSALSDDLEAQG CCCHHHCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEECCCCCCCHHHHHHHHHCC AIGSATLFKLRARLLGGGTEIKTGSFLIPKRASEATILEILKGDKVIRRLITIPEGMPSI CCCHHHHHHHHHHHHCCCCEECCCCEECCCCCCHHHHHHHHHHHHHHHHHHHCCCCCHHH MVAERLRAVDGLTGDVAVPEEGSVLPDSYDWQKGESRAAVVKRMQAAMDKTLAELWAKRS HHHHHHHHHCCCCCCEECCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCC PRTVAKTPQEALVLASIVEKETGKPEERRMVAGLYSNRLRQRMLLQADPTIIYPITGGKP CCHHHCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCH LGRRIRQSEIQAVNGYNTYTMIGLPKGPITNPGRDSIAAVLDPAETDALFMVADGTGGHV HHHHHHHHHHHEECCCCEEEEEECCCCCCCCCCCCCHHHHCCCCCCCEEEEEECCCCCHH FASTLQEHNANVAKWFAIRKARGEI HHHHHHHHCCCHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 7542800 [H]