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The map label for this gene is glcD [H]

Identifier: 87199311

GI number: 87199311

Start: 1332757

End: 1334175

Strand: Reverse

Name: glcD [H]

Synonym: Saro_1290

Alternate gene names: 87199311

Gene position: 1334175-1332757 (Counterclockwise)

Preceding gene: 87199314

Following gene: 87199310

Centisome position: 37.46

GC content: 70.19

Gene sequence:

>1419_bases
ATGAACAGCGCGTTTCTGGAAGAAGCGGCCCGCCTGCTCGGGCCCAAGGGGCTGACGACGTCGGCGGAAGACATGGCACC
GTGGCTGACGGACTGGCGCGGGCGCTATACCGGAAAGGCGCTCGCCCTCGCCTCGCCGGCCAGCACGGCGGAAGTCTCGG
CGCTGGTCAGGCTGTGTGCCGAACACGGCGTGCCGATCGTGCCACAGGGCGGAAACAGCGGCATGTCGGGCGGCGCGACG
CCATTCGAGAGCGGAACCGAACTCGTCCTCTCGCTGCGGCGGATGAATCGCATCCTTGCGCTGGACCCGGCCGCGCGCAC
CGCGACGTGCGAGGCCGGCGTCATCCTCCAGGTGCTTCACGAGGCGGCGGAGAAGGAAGGGCTGCGCTTTCCGCTGTCGC
TGGGCGGCAAGGGTTCGGCGACCGTGGGCGGGCTGGTCTCGACCAATGCGGGGGGCACGCAGGTCCTGCGCCACGGATCG
ATGCGCGCGCTGGTGCTGGGACTGGAGGGGGTGCTGGCAGACGGGTCCGTGCTGAACCAGCTCACCCCGCTCAAGAAGGA
CAACCGCGGGTTCGACCTGAAGCAGGTGCTGATCGGGTCGGAAGGAACGCTGGGGATCGTGACGGCGGCGACGCTGAAGC
TTGAGCCGGGAATCGCGGGCCGTTCGGTGATGTGGGCGGGAACCGCATCGCTGCACGACGCGCGCGCCCTGCTGTTGCTG
GCGGGCGACATGGCCGGCAGCCTGCTGGAAGGTTTCGAGGTCCTGCCGCAGCACAGCCTCGAGGCGGTGCTTGCCTACCT
GCCGGATGCCCGCGCGCCCCTGGCCGGGCCGCACGAGTGGCATGCGCTGATCGAACTCGTGGCGGGAGACGCCGAGACCG
CCGCGCGGCTGCCCGAGATATCGGAGCGCCTGCTGACCGAGGCCTTCGAGCGCGGTCTCGTGGCCGACGCGACGATCGCG
GCGAGCGAGGACCAGGCCGAGCGGCTGTGGCTGATCCGCGAGACCATCTCTCCCGCCGAACGCGCGATCGGCCCCGCCAT
GCAGCACGACATTTCGGTGCCGGTGGAGAAGATGCCGGCTTTCGTCGAGGCGGCGGTGCCCCAGCTCGAGGCGGACTGGC
CTGGAACGCAGGCGGTGTGCTTCGGGCACCTGGGCGACGGCAACGTCCACTTCCACGTCATCGCCCCACCCGGCAGCGAG
CGGGCGGCGTGGGAGGCGGGCGACGGCAAGGCGATCAGCGCGCAGGTCCACGACATGGTGACAGCCTGGGGCGGATCGAT
ATCGGCCGAACACGGCATCGGCCGCCTGAAGCGCGACGAACTCGACCGGCTGGGCGACCCGGTGATGCTGGCCACGATGC
GCGCGATCAAGCGGGCGCTTGACCCCAAAGGGCTGCTAAACCCCGGAAAGCTGGTGTGA

Upstream 100 bases:

>100_bases
CGCGTCCCCACCCCTAGTCCCGAGGCTTGAACGCCGGCTTAACCCGGCGAAAAGGAAAAATGAATTGCCCTGTTGGCAGG
GTGGCAATAGCCGGTGTGCG

Downstream 100 bases:

>100_bases
CGCGGCTTGCGCGGCGGTTTCCCAGTCCCTAAGAACCGCGGTTCCCGCAAGAACCGCGGTCAGCCGCGCGTTACCTGTTG
ATCTTGGAGAGATGCACAAT

Product: FAD linked oxidase-like protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 472; Mature: 472

Protein sequence:

>472_residues
MNSAFLEEAARLLGPKGLTTSAEDMAPWLTDWRGRYTGKALALASPASTAEVSALVRLCAEHGVPIVPQGGNSGMSGGAT
PFESGTELVLSLRRMNRILALDPAARTATCEAGVILQVLHEAAEKEGLRFPLSLGGKGSATVGGLVSTNAGGTQVLRHGS
MRALVLGLEGVLADGSVLNQLTPLKKDNRGFDLKQVLIGSEGTLGIVTAATLKLEPGIAGRSVMWAGTASLHDARALLLL
AGDMAGSLLEGFEVLPQHSLEAVLAYLPDARAPLAGPHEWHALIELVAGDAETAARLPEISERLLTEAFERGLVADATIA
ASEDQAERLWLIRETISPAERAIGPAMQHDISVPVEKMPAFVEAAVPQLEADWPGTQAVCFGHLGDGNVHFHVIAPPGSE
RAAWEAGDGKAISAQVHDMVTAWGGSISAEHGIGRLKRDELDRLGDPVMLATMRAIKRALDPKGLLNPGKLV

Sequences:

>Translated_472_residues
MNSAFLEEAARLLGPKGLTTSAEDMAPWLTDWRGRYTGKALALASPASTAEVSALVRLCAEHGVPIVPQGGNSGMSGGAT
PFESGTELVLSLRRMNRILALDPAARTATCEAGVILQVLHEAAEKEGLRFPLSLGGKGSATVGGLVSTNAGGTQVLRHGS
MRALVLGLEGVLADGSVLNQLTPLKKDNRGFDLKQVLIGSEGTLGIVTAATLKLEPGIAGRSVMWAGTASLHDARALLLL
AGDMAGSLLEGFEVLPQHSLEAVLAYLPDARAPLAGPHEWHALIELVAGDAETAARLPEISERLLTEAFERGLVADATIA
ASEDQAERLWLIRETISPAERAIGPAMQHDISVPVEKMPAFVEAAVPQLEADWPGTQAVCFGHLGDGNVHFHVIAPPGSE
RAAWEAGDGKAISAQVHDMVTAWGGSISAEHGIGRLKRDELDRLGDPVMLATMRAIKRALDPKGLLNPGKLV
>Mature_472_residues
MNSAFLEEAARLLGPKGLTTSAEDMAPWLTDWRGRYTGKALALASPASTAEVSALVRLCAEHGVPIVPQGGNSGMSGGAT
PFESGTELVLSLRRMNRILALDPAARTATCEAGVILQVLHEAAEKEGLRFPLSLGGKGSATVGGLVSTNAGGTQVLRHGS
MRALVLGLEGVLADGSVLNQLTPLKKDNRGFDLKQVLIGSEGTLGIVTAATLKLEPGIAGRSVMWAGTASLHDARALLLL
AGDMAGSLLEGFEVLPQHSLEAVLAYLPDARAPLAGPHEWHALIELVAGDAETAARLPEISERLLTEAFERGLVADATIA
ASEDQAERLWLIRETISPAERAIGPAMQHDISVPVEKMPAFVEAAVPQLEADWPGTQAVCFGHLGDGNVHFHVIAPPGSE
RAAWEAGDGKAISAQVHDMVTAWGGSISAEHGIGRLKRDELDRLGDPVMLATMRAIKRALDPKGLLNPGKLV

Specific function: Unknown

COG id: COG0277

COG function: function code C; FAD/FMN-containing dehydrogenases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 FAD-binding PCMH-type domain [H]

Homologues:

Organism=Homo sapiens, GI119964728, Length=456, Percent_Identity=37.0614035087719, Blast_Score=273, Evalue=3e-73,
Organism=Homo sapiens, GI37595756, Length=448, Percent_Identity=31.4732142857143, Blast_Score=170, Evalue=3e-42,
Organism=Homo sapiens, GI37595754, Length=471, Percent_Identity=30.1486199575372, Blast_Score=162, Evalue=6e-40,
Organism=Homo sapiens, GI4501993, Length=173, Percent_Identity=31.7919075144509, Blast_Score=78, Evalue=1e-14,
Organism=Escherichia coli, GI1789351, Length=456, Percent_Identity=30.0438596491228, Blast_Score=159, Evalue=3e-40,
Organism=Escherichia coli, GI48994907, Length=455, Percent_Identity=24.1758241758242, Blast_Score=91, Evalue=2e-19,
Organism=Escherichia coli, GI1787977, Length=511, Percent_Identity=25.8317025440313, Blast_Score=90, Evalue=4e-19,
Organism=Caenorhabditis elegans, GI17534361, Length=452, Percent_Identity=31.4159292035398, Blast_Score=232, Evalue=3e-61,
Organism=Caenorhabditis elegans, GI71992373, Length=447, Percent_Identity=29.3064876957494, Blast_Score=146, Evalue=3e-35,
Organism=Caenorhabditis elegans, GI71992381, Length=443, Percent_Identity=28.8939051918736, Blast_Score=138, Evalue=6e-33,
Organism=Caenorhabditis elegans, GI71992392, Length=366, Percent_Identity=30.8743169398907, Blast_Score=125, Evalue=5e-29,
Organism=Caenorhabditis elegans, GI17556096, Length=173, Percent_Identity=28.3236994219653, Blast_Score=79, Evalue=4e-15,
Organism=Saccharomyces cerevisiae, GI6320023, Length=461, Percent_Identity=34.2733188720174, Blast_Score=293, Evalue=3e-80,
Organism=Saccharomyces cerevisiae, GI6320764, Length=458, Percent_Identity=31.2227074235808, Blast_Score=267, Evalue=2e-72,
Organism=Saccharomyces cerevisiae, GI6320027, Length=445, Percent_Identity=26.9662921348315, Blast_Score=143, Evalue=5e-35,
Organism=Drosophila melanogaster, GI18921117, Length=466, Percent_Identity=34.7639484978541, Blast_Score=271, Evalue=8e-73,
Organism=Drosophila melanogaster, GI24639277, Length=466, Percent_Identity=34.7639484978541, Blast_Score=271, Evalue=8e-73,
Organism=Drosophila melanogaster, GI24639275, Length=466, Percent_Identity=34.7639484978541, Blast_Score=271, Evalue=8e-73,
Organism=Drosophila melanogaster, GI24653753, Length=187, Percent_Identity=31.0160427807487, Blast_Score=86, Evalue=4e-17,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR016166
- InterPro:   IPR016167
- InterPro:   IPR016164
- InterPro:   IPR016168
- InterPro:   IPR004113
- InterPro:   IPR004490
- InterPro:   IPR006094
- InterPro:   IPR016171 [H]

Pfam domain/function: PF02913 FAD-oxidase_C; PF01565 FAD_binding_4 [H]

EC number: NA

Molecular weight: Translated: 49437; Mature: 49437

Theoretical pI: Translated: 5.32; Mature: 5.32

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNSAFLEEAARLLGPKGLTTSAEDMAPWLTDWRGRYTGKALALASPASTAEVSALVRLCA
CCHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHCCCCCCCEEEEECCCCHHHHHHHHHHHH
EHGVPIVPQGGNSGMSGGATPFESGTELVLSLRRMNRILALDPAARTATCEAGVILQVLH
HCCCEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHCCEEEECCCCCCCCCCHHHHHHHHH
EAAEKEGLRFPLSLGGKGSATVGGLVSTNAGGTQVLRHGSMRALVLGLEGVLADGSVLNQ
HHHHHCCCEEEEECCCCCCCCCCCEEECCCCHHHHHHCCCCEEEEEEHHHHHCCCHHHHH
LTPLKKDNRGFDLKQVLIGSEGTLGIVTAATLKLEPGIAGRSVMWAGTASLHDARALLLL
HCCCCCCCCCCCHHHHEECCCCCEEEEEEEEEEECCCCCCCEEEEECCCCHHHHHEEEEE
AGDMAGSLLEGFEVLPQHSLEAVLAYLPDARAPLAGPHEWHALIELVAGDAETAARLPEI
ECHHHHHHHHHHHHHCHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHCCHHHHHHCHHH
SERLLTEAFERGLVADATIAASEDQAERLWLIRETISPAERAIGPAMQHDISVPVEKMPA
HHHHHHHHHHCCCEECEEEECCCCHHHHHHHHHHHCCHHHHHHCHHHHCCCCCCHHHHHH
FVEAAVPQLEADWPGTQAVCFGHLGDGNVHFHVIAPPGSERAAWEAGDGKAISAQVHDMV
HHHHHCCCCCCCCCCCCEEEEEECCCCCEEEEEECCCCCCCCCEECCCCCEEHHHHHHHH
TAWGGSISAEHGIGRLKRDELDRLGDPVMLATMRAIKRALDPKGLLNPGKLV
HHCCCCCCCHHCCCCCCHHHHHHCCCHHHHHHHHHHHHHCCCCCCCCCCCCC
>Mature Secondary Structure
MNSAFLEEAARLLGPKGLTTSAEDMAPWLTDWRGRYTGKALALASPASTAEVSALVRLCA
CCHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHCCCCCCCEEEEECCCCHHHHHHHHHHHH
EHGVPIVPQGGNSGMSGGATPFESGTELVLSLRRMNRILALDPAARTATCEAGVILQVLH
HCCCEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHCCEEEECCCCCCCCCCHHHHHHHHH
EAAEKEGLRFPLSLGGKGSATVGGLVSTNAGGTQVLRHGSMRALVLGLEGVLADGSVLNQ
HHHHHCCCEEEEECCCCCCCCCCCEEECCCCHHHHHHCCCCEEEEEEHHHHHCCCHHHHH
LTPLKKDNRGFDLKQVLIGSEGTLGIVTAATLKLEPGIAGRSVMWAGTASLHDARALLLL
HCCCCCCCCCCCHHHHEECCCCCEEEEEEEEEEECCCCCCCEEEEECCCCHHHHHEEEEE
AGDMAGSLLEGFEVLPQHSLEAVLAYLPDARAPLAGPHEWHALIELVAGDAETAARLPEI
ECHHHHHHHHHHHHHCHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHCCHHHHHHCHHH
SERLLTEAFERGLVADATIAASEDQAERLWLIRETISPAERAIGPAMQHDISVPVEKMPA
HHHHHHHHHHCCCEECEEEECCCCHHHHHHHHHHHCCHHHHHHCHHHHCCCCCCHHHHHH
FVEAAVPQLEADWPGTQAVCFGHLGDGNVHFHVIAPPGSERAAWEAGDGKAISAQVHDMV
HHHHHCCCCCCCCCCCCEEEEEECCCCCEEEEEECCCCCCCCCEECCCCCEEHHHHHHHH
TAWGGSISAEHGIGRLKRDELDRLGDPVMLATMRAIKRALDPKGLLNPGKLV
HHCCCCCCCHHCCCCCCHHHHHHCCCHHHHHHHHHHHHHCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8969504; 9384377 [H]