Definition Novosphingobium aromaticivorans DSM 12444 chromosome, complete genome.
Accession NC_007794
Length 3,561,584

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The map label for this gene is 87199310

Identifier: 87199310

GI number: 87199310

Start: 1331879

End: 1332658

Strand: Reverse

Name: 87199310

Synonym: Saro_1289

Alternate gene names: NA

Gene position: 1332658-1331879 (Counterclockwise)

Preceding gene: 87199311

Following gene: 87199308

Centisome position: 37.42

GC content: 63.72

Gene sequence:

>780_bases
ATGGCCAGCGCGCCGCAAGCCAACCTGCCGATGTTCTACAACGACCTTATGCCGCTCAACAGCCGCGACCACGCCGCGTG
GAAGGCGAAGAATGCGGATGCGGCCCCCTGGCTCATCGGCCAGCACGCCATCCCCTTGACGGCAGAGGAATTTCCGCAGG
CCGCGCGCCACTACCCGATCATTTTCGCATCGGGCGACAACCCCGTTCCGCTGGCCCTGATGGGCCTTAACGAAGGCGTG
AACGTGTTCGTCGACGAGGACGGCAAGGTCACGCAGCCGGTCTACATCCCGGCCTATGTCCGCCGCTATCCGTTCCTCCT
CGCCAAGCTCAACCCGAACAGCGAAGAGCTGTCGCTGTGCTTCGATCCCTCGTCCGGCCTGATCGGCGATTCGGTCGACG
GCGTGGAGCTTTTCTCCGACGGCCAGCCTTCGGAAGCGACCAAGGCCGCGCTCGGCTTCTGCGAACAGTTCGAACAGGCC
GGCCAGCGTACGCAGGCCTTCATCGACGAACTGAAGAAGCATGACCTCCTGATGGAAGGCGAAGTCGCCATCCAGCAGCA
GGGCAACGAACAGCCGTTCATCTATCGCGGTTTCCAGATGGTCAACCAGGACAAGCTGCGCGAAACCCGTGGCGACGTGC
TGCGCGGCTGGGCGCAAAGCGGGCTCCTGCCGCTGCTTTATGCTCACCTGTTCTCGCTCGAACTGATCAGCCAGATCTTC
GGCGCGCAGGTCCAGATGGGCAAGGGCCCGATCCCGGCGACCCCGGTTCCGGCCGAGTAA

Upstream 100 bases:

>100_bases
GACGCGGCTTGCGCGGCGGTTTCCCAGTCCCTAAGAACCGCGGTTCCCGCAAGAACCGCGGTCAGCCGCGCGTTACCTGT
TGATCTTGGAGAGATGCACA

Downstream 100 bases:

>100_bases
ACGGCCGCCCTGCAATCGGGCAACAGGTCAACAAAAAAGGCGACGGGCACTCAGCTTGTCGCCTTTTTTGTTTCCGGTGT
TGCAAATTTCACGCAAACCC

Product: SapC

Products: NA

Alternate protein names: SapC-Related Protein; SapC Superfamily; SapC-Like Protein; SapC Protein; SapC Superfamily Protein; Sapc Family Protein

Number of amino acids: Translated: 259; Mature: 258

Protein sequence:

>259_residues
MASAPQANLPMFYNDLMPLNSRDHAAWKAKNADAAPWLIGQHAIPLTAEEFPQAARHYPIIFASGDNPVPLALMGLNEGV
NVFVDEDGKVTQPVYIPAYVRRYPFLLAKLNPNSEELSLCFDPSSGLIGDSVDGVELFSDGQPSEATKAALGFCEQFEQA
GQRTQAFIDELKKHDLLMEGEVAIQQQGNEQPFIYRGFQMVNQDKLRETRGDVLRGWAQSGLLPLLYAHLFSLELISQIF
GAQVQMGKGPIPATPVPAE

Sequences:

>Translated_259_residues
MASAPQANLPMFYNDLMPLNSRDHAAWKAKNADAAPWLIGQHAIPLTAEEFPQAARHYPIIFASGDNPVPLALMGLNEGV
NVFVDEDGKVTQPVYIPAYVRRYPFLLAKLNPNSEELSLCFDPSSGLIGDSVDGVELFSDGQPSEATKAALGFCEQFEQA
GQRTQAFIDELKKHDLLMEGEVAIQQQGNEQPFIYRGFQMVNQDKLRETRGDVLRGWAQSGLLPLLYAHLFSLELISQIF
GAQVQMGKGPIPATPVPAE
>Mature_258_residues
ASAPQANLPMFYNDLMPLNSRDHAAWKAKNADAAPWLIGQHAIPLTAEEFPQAARHYPIIFASGDNPVPLALMGLNEGVN
VFVDEDGKVTQPVYIPAYVRRYPFLLAKLNPNSEELSLCFDPSSGLIGDSVDGVELFSDGQPSEATKAALGFCEQFEQAG
QRTQAFIDELKKHDLLMEGEVAIQQQGNEQPFIYRGFQMVNQDKLRETRGDVLRGWAQSGLLPLLYAHLFSLELISQIFG
AQVQMGKGPIPATPVPAE

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 28469; Mature: 28337

Theoretical pI: Translated: 4.48; Mature: 4.48

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MASAPQANLPMFYNDLMPLNSRDHAAWKAKNADAAPWLIGQHAIPLTAEEFPQAARHYPI
CCCCCCCCCCCHHHCCCCCCCCCCCCEECCCCCCCCEEECCCCCCCCHHHHHHHHHCCCE
IFASGDNPVPLALMGLNEGVNVFVDEDGKVTQPVYIPAYVRRYPFLLAKLNPNSEELSLC
EEECCCCCCEEEEEECCCCCEEEECCCCCEECCEECHHHHHHCCEEEEEECCCCCEEEEE
FDPSSGLIGDSVDGVELFSDGQPSEATKAALGFCEQFEQAGQRTQAFIDELKKHDLLMEG
ECCCCCCCCCCCCCEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEECC
EVAIQQQGNEQPFIYRGFQMVNQDKLRETRGDVLRGWAQSGLLPLLYAHLFSLELISQIF
CCCEECCCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHH
GAQVQMGKGPIPATPVPAE
CCEEECCCCCCCCCCCCCC
>Mature Secondary Structure 
ASAPQANLPMFYNDLMPLNSRDHAAWKAKNADAAPWLIGQHAIPLTAEEFPQAARHYPI
CCCCCCCCCCHHHCCCCCCCCCCCCEECCCCCCCCEEECCCCCCCCHHHHHHHHHCCCE
IFASGDNPVPLALMGLNEGVNVFVDEDGKVTQPVYIPAYVRRYPFLLAKLNPNSEELSLC
EEECCCCCCEEEEEECCCCCEEEECCCCCEECCEECHHHHHHCCEEEEEECCCCCEEEEE
FDPSSGLIGDSVDGVELFSDGQPSEATKAALGFCEQFEQAGQRTQAFIDELKKHDLLMEG
ECCCCCCCCCCCCCEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEECC
EVAIQQQGNEQPFIYRGFQMVNQDKLRETRGDVLRGWAQSGLLPLLYAHLFSLELISQIF
CCCEECCCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHH
GAQVQMGKGPIPATPVPAE
CCEEECCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA