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The map label for this gene is rhaT [H]

Identifier: 87199071

GI number: 87199071

Start: 1088007

End: 1089080

Strand: Reverse

Name: rhaT [H]

Synonym: Saro_1049

Alternate gene names: 87199071

Gene position: 1089080-1088007 (Counterclockwise)

Preceding gene: 87199072

Following gene: 87199070

Centisome position: 30.58

GC content: 66.57

Gene sequence:

>1074_bases
ATGGGCGCAAACCCCGCACTGGGCGTGATCTTCCACTGGCTGGGCGGCTTCTCGTCGGCCAGCTTCTACGTGCCGTACAA
GCGCATCAAGCTCTGGTCGTGGGAGGTTTTCTGGCTCGCGGGCGGCCTGTTCTCCTGGGCCATCGCGCCGTGGCTCTTCG
CCTCGCTGCGCACCAACAACCTTCTCGGCGTGCTTTCGTCCGCGCCTTCCTCGACGCTGTTCTGGTGCTGGTTCTGGGGC
GCGATGTGGGGCTTCGGCGGCCTCACCTTCGGGCTGACCATGCGCTATCTCGGGCTTTCGCTCGGCATGGCGGTGGCACT
TGGCCTTACCACGGTAATCGGCACGATGGGCCCGCCGATATTCGACGGTACGCTTGGCCAGATTGCCGCGACGACCAGTG
GCAAGCTGACCCTGCTCGGCATTCTCGTCACGCTAGTGGGCATCGTCGTGGTGGCGCGCGCCGGCAGCGCCAAGGAAGCC
GAACTGGGCGGCGCGGCCTCCGAAGGCGTCGCCGAATTCAACTTGCGCAAGGGCCTGCTGATCGCGGTATTCTCGGGCGT
GATGTCTGGCTGCTTCGCCTGGGGCCTGGCCGCAGGCCAGCCGATCCGGGACCTGACCCTCGCCGCCGGCACCGATCCGC
TCAGCCAGGGCCTGCCGGTCCTCTGCATCGTCCTTGCGGGCGGACTGACCACCAATGCCCTGTGGTGCGCGTACCTGATC
GCCCGGAACCGCAGCTTCGGCCAGTTCTTCGGCGCGGCCCCTGCCGATGCCGCTCCGGGCGAGCGGCCCAACCTTCTTGC
CAACTGGCTTCTGGCCGCGCTCGGCGGAACGCTGTGGTACGGGCAGTTCTTCTTCTACACGATGGGCGAAAGCCAGATGG
GCAAATACGGCTTCTCGTCGTGGACGCTGCACATGGCGTCGATCATCCTGTTTTCGACGCTCTGGGGCTTCGCGCTGAAG
GAATGGAAGGGCGCATCCGGCCGCACGCGCACGCTGGTGTGGACCGGCATCGGCCTTCTGGTCGGCGCGACGGTGGTGAT
CGGCGCGGGGAACATGCTGAATGCGTCAGCCTGA

Upstream 100 bases:

>100_bases
AGATGCGCGTCGCCATGACGCTGACCGGCGTGAAGAACATCGGTGAGATCGACCGCTCGATCCTCGCCAGCAGATAAAAG
AACGAAGGGACAGGATACCG

Downstream 100 bases:

>100_bases
AAAGAGTGATCGATTTCGATCATTCCCCGGTGCATAAGCGCGCCGGAAGGGGACGTGAGGGTCATGCACGCGGCGGAACG
GGAACGGCTAATCCTTGATG

Product: rhamnose-proton symporter

Products: Proton [Cytoplasm]; L-rhamnose [Cytoplasm] [C]

Alternate protein names: L-rhamnose-H(+) transport protein [H]

Number of amino acids: Translated: 357; Mature: 356

Protein sequence:

>357_residues
MGANPALGVIFHWLGGFSSASFYVPYKRIKLWSWEVFWLAGGLFSWAIAPWLFASLRTNNLLGVLSSAPSSTLFWCWFWG
AMWGFGGLTFGLTMRYLGLSLGMAVALGLTTVIGTMGPPIFDGTLGQIAATTSGKLTLLGILVTLVGIVVVARAGSAKEA
ELGGAASEGVAEFNLRKGLLIAVFSGVMSGCFAWGLAAGQPIRDLTLAAGTDPLSQGLPVLCIVLAGGLTTNALWCAYLI
ARNRSFGQFFGAAPADAAPGERPNLLANWLLAALGGTLWYGQFFFYTMGESQMGKYGFSSWTLHMASIILFSTLWGFALK
EWKGASGRTRTLVWTGIGLLVGATVVIGAGNMLNASA

Sequences:

>Translated_357_residues
MGANPALGVIFHWLGGFSSASFYVPYKRIKLWSWEVFWLAGGLFSWAIAPWLFASLRTNNLLGVLSSAPSSTLFWCWFWG
AMWGFGGLTFGLTMRYLGLSLGMAVALGLTTVIGTMGPPIFDGTLGQIAATTSGKLTLLGILVTLVGIVVVARAGSAKEA
ELGGAASEGVAEFNLRKGLLIAVFSGVMSGCFAWGLAAGQPIRDLTLAAGTDPLSQGLPVLCIVLAGGLTTNALWCAYLI
ARNRSFGQFFGAAPADAAPGERPNLLANWLLAALGGTLWYGQFFFYTMGESQMGKYGFSSWTLHMASIILFSTLWGFALK
EWKGASGRTRTLVWTGIGLLVGATVVIGAGNMLNASA
>Mature_356_residues
GANPALGVIFHWLGGFSSASFYVPYKRIKLWSWEVFWLAGGLFSWAIAPWLFASLRTNNLLGVLSSAPSSTLFWCWFWGA
MWGFGGLTFGLTMRYLGLSLGMAVALGLTTVIGTMGPPIFDGTLGQIAATTSGKLTLLGILVTLVGIVVVARAGSAKEAE
LGGAASEGVAEFNLRKGLLIAVFSGVMSGCFAWGLAAGQPIRDLTLAAGTDPLSQGLPVLCIVLAGGLTTNALWCAYLIA
RNRSFGQFFGAAPADAAPGERPNLLANWLLAALGGTLWYGQFFFYTMGESQMGKYGFSSWTLHMASIILFSTLWGFALKE
WKGASGRTRTLVWTGIGLLVGATVVIGAGNMLNASA

Specific function: Uptake of L-rhamnose across the boundary membrane with the concomitant transport of protons into the cell (symport system) [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the L-rhamnose transporter (TC 2.A.7.6) family [H]

Homologues:

Organism=Escherichia coli, GI1790341, Length=345, Percent_Identity=37.6811594202899, Blast_Score=243, Evalue=2e-65,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004673
- InterPro:   IPR010476 [H]

Pfam domain/function: PF06379 RhaT [H]

EC number: NA

Molecular weight: Translated: 37654; Mature: 37523

Theoretical pI: Translated: 9.64; Mature: 9.64

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGANPALGVIFHWLGGFSSASFYVPYKRIKLWSWEVFWLAGGLFSWAIAPWLFASLRTNN
CCCCCHHHHHHHHHCCCCCCEEECCHHHEEEEEEEHHHHHHHHHHHHHHHHHHHHHHCCC
LLGVLSSAPSSTLFWCWFWGAMWGFGGLTFGLTMRYLGLSLGMAVALGLTTVIGTMGPPI
HHEECCCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
FDGTLGQIAATTSGKLTLLGILVTLVGIVVVARAGSAKEAELGGAASEGVAEFNLRKGLL
CCCCCHHHEECCCCCHHHHHHHHHHHHHHHHHCCCCCCHHHCCCCCCCCHHHHHHHCHHH
IAVFSGVMSGCFAWGLAAGQPIRDLTLAAGTDPLSQGLPVLCIVLAGGLTTNALWCAYLI
HHHHHHHHHHHHHHHHCCCCCHHHEEEECCCCHHHCCCHHHHHHHHCCCHHHHHHHHHHH
ARNRSFGQFFGAAPADAAPGERPNLLANWLLAALGGTLWYGQFFFYTMGESQMGKYGFSS
HHCCCHHHHHCCCCCCCCCCCCCHHHHHHHHHHHCCHHHHHEEEEEECCCHHCCCCCCCH
WTLHMASIILFSTLWGFALKEWKGASGRTRTLVWTGIGLLVGATVVIGAGNMLNASA
HHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEEHHHHHHHHHHEEECCCCCCCCC
>Mature Secondary Structure 
GANPALGVIFHWLGGFSSASFYVPYKRIKLWSWEVFWLAGGLFSWAIAPWLFASLRTNN
CCCCHHHHHHHHHCCCCCCEEECCHHHEEEEEEEHHHHHHHHHHHHHHHHHHHHHHCCC
LLGVLSSAPSSTLFWCWFWGAMWGFGGLTFGLTMRYLGLSLGMAVALGLTTVIGTMGPPI
HHEECCCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
FDGTLGQIAATTSGKLTLLGILVTLVGIVVVARAGSAKEAELGGAASEGVAEFNLRKGLL
CCCCCHHHEECCCCCHHHHHHHHHHHHHHHHHCCCCCCHHHCCCCCCCCHHHHHHHCHHH
IAVFSGVMSGCFAWGLAAGQPIRDLTLAAGTDPLSQGLPVLCIVLAGGLTTNALWCAYLI
HHHHHHHHHHHHHHHHCCCCCHHHEEEECCCCHHHCCCHHHHHHHHCCCHHHHHHHHHHH
ARNRSFGQFFGAAPADAAPGERPNLLANWLLAALGGTLWYGQFFFYTMGESQMGKYGFSS
HHCCCHHHHHCCCCCCCCCCCCCHHHHHHHHHHHCCHHHHHEEEEEECCCHHCCCCCCCH
WTLHMASIILFSTLWGFALKEWKGASGRTRTLVWTGIGLLVGATVVIGAGNMLNASA
HHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEEHHHHHHHHHHEEECCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: Proton [Periplasm]; L-rhamnose [Periplasm] [C]

Specific reaction: Proton [Periplasm] + L-rhamnose [Periplasm] = Proton [Cytoplasm] + L-rhamnose [Cytoplasm] [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA