| Definition | Novosphingobium aromaticivorans DSM 12444 chromosome, complete genome. |
|---|---|
| Accession | NC_007794 |
| Length | 3,561,584 |
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The map label for this gene is yhbS [C]
Identifier: 87199046
GI number: 87199046
Start: 1062338
End: 1062874
Strand: Reverse
Name: yhbS [C]
Synonym: Saro_1024
Alternate gene names: 87199046
Gene position: 1062874-1062338 (Counterclockwise)
Preceding gene: 87199050
Following gene: 87199045
Centisome position: 29.84
GC content: 66.48
Gene sequence:
>537_bases GTGCGAGGACGGCCGAGGAAACCGCTGTTGTCCAAGATCATTCCGCTTGCCGATGTCGATCCCGCCCTGATCGAGGCCGT CCTCGACCAGGCGTTCGAGCCGGAGCGGCACAAGCGAACCGCCTACAAGGTGCGCGAAGGGACGCAGTGGCTGCCGAACC TTTCGTTCGCGGCGCTTGACGACGAAGACATGCTGGCCGGCACGATCCAGTGCTGGCCCGTCGCGCTGACCGACGCAGAA GGACGCGCGCATCCGATGATAATGGTCGGCCCGGTCGCCGTGCTGCCGCATCTCCAGGGCGAAGGCTTCGGCAAGGCGCT GATGACCGCCAGCCTTACCGCGATCGATCCGCGCGCGCCCTTGCCGCAAGTCCTGATCGGCGACCCTGAATACTACGAGC GCTTCTTCGGCTTCTCGAACGCGCATACCGCCGGGTGGAAACTGCCCGGCCCGTTCGAGCAGCGCCGCCTGCTGTGTCGC ACCGCCAATCCGGCAGTTCTGCCGCAAGAGGGCATGTTGGGCCCTTGGCGGCGCTGA
Upstream 100 bases:
>100_bases CACTTATCGCATCACCGATGCCCCCGGTTGCGAGGTGCCGCCGCGACGACCTTGCAGCCCGGGACACGGGGGGCTATCGG CGCGCGTCCTTTGCGATTCC
Downstream 100 bases:
>100_bases GCCGATCTGGCATCGGCGGATCGTGCCCTACGTTCCGCCCCCCGAACTTGCCTCGCTGAGCCTGGCCGAGATTGCCGCGC AGGTTGCCGCGCGCAAGCTG
Product: acetyltransferase-like
Products: NA
Alternate protein names: Acetyltransferase; Acetyltransferase Gnat Family; Acetyltransferase GNAT Family; GCN5-Like N-Acetyltransferase; Acetyltransferase Protein; Acetyltransferase Family Protein; Gcn5-Related N-Acetyltransferase; Acetyltransferase-Like
Number of amino acids: Translated: 178; Mature: 178
Protein sequence:
>178_residues MRGRPRKPLLSKIIPLADVDPALIEAVLDQAFEPERHKRTAYKVREGTQWLPNLSFAALDDEDMLAGTIQCWPVALTDAE GRAHPMIMVGPVAVLPHLQGEGFGKALMTASLTAIDPRAPLPQVLIGDPEYYERFFGFSNAHTAGWKLPGPFEQRRLLCR TANPAVLPQEGMLGPWRR
Sequences:
>Translated_178_residues MRGRPRKPLLSKIIPLADVDPALIEAVLDQAFEPERHKRTAYKVREGTQWLPNLSFAALDDEDMLAGTIQCWPVALTDAE GRAHPMIMVGPVAVLPHLQGEGFGKALMTASLTAIDPRAPLPQVLIGDPEYYERFFGFSNAHTAGWKLPGPFEQRRLLCR TANPAVLPQEGMLGPWRR >Mature_178_residues MRGRPRKPLLSKIIPLADVDPALIEAVLDQAFEPERHKRTAYKVREGTQWLPNLSFAALDDEDMLAGTIQCWPVALTDAE GRAHPMIMVGPVAVLPHLQGEGFGKALMTASLTAIDPRAPLPQVLIGDPEYYERFFGFSNAHTAGWKLPGPFEQRRLLCR TANPAVLPQEGMLGPWRR
Specific function: Unknown
COG id: COG3153
COG function: function code R; Predicted acetyltransferase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: 2.3.1.- [C]
Molecular weight: Translated: 19759; Mature: 19759
Theoretical pI: Translated: 7.58; Mature: 7.58
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 3.4 %Met (Translated Protein) 4.5 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 3.4 %Met (Mature Protein) 4.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRGRPRKPLLSKIIPLADVDPALIEAVLDQAFEPERHKRTAYKVREGTQWLPNLSFAALD CCCCCCCCHHHHHCCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCCCCCEEEEC DEDMLAGTIQCWPVALTDAEGRAHPMIMVGPVAVLPHLQGEGFGKALMTASLTAIDPRAP CCCHHEEEEEEEEEEEECCCCCCCCEEEECHHHHHCCCCCCCCCHHHHHHHHHCCCCCCC LPQVLIGDPEYYERFFGFSNAHTAGWKLPGPFEQRRLLCRTANPAVLPQEGMLGPWRR CCCEEECCHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCC >Mature Secondary Structure MRGRPRKPLLSKIIPLADVDPALIEAVLDQAFEPERHKRTAYKVREGTQWLPNLSFAALD CCCCCCCCHHHHHCCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCCCCCEEEEC DEDMLAGTIQCWPVALTDAEGRAHPMIMVGPVAVLPHLQGEGFGKALMTASLTAIDPRAP CCCHHEEEEEEEEEEEECCCCCCCCEEEECHHHHHCCCCCCCCCHHHHHHHHHCCCCCCC LPQVLIGDPEYYERFFGFSNAHTAGWKLPGPFEQRRLLCRTANPAVLPQEGMLGPWRR CCCEEECCHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA