Definition Novosphingobium aromaticivorans DSM 12444 chromosome, complete genome.
Accession NC_007794
Length 3,561,584

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The map label for this gene is 87199045

Identifier: 87199045

GI number: 87199045

Start: 1061746

End: 1062315

Strand: Reverse

Name: 87199045

Synonym: Saro_1023

Alternate gene names: NA

Gene position: 1062315-1061746 (Counterclockwise)

Preceding gene: 87199046

Following gene: 87199044

Centisome position: 29.83

GC content: 67.54

Gene sequence:

>570_bases
GTGCCCTACGTTCCGCCCCCCGAACTTGCCTCGCTGAGCCTGGCCGAGATTGCCGCGCAGGTTGCCGCGCGCAAGCTGCC
CCCGCTGAGCCAGTGGACGCCGCAGGAAAGCGGCAACAGCGAAATGCGCATTGCCGCCGACGGGCGCTGGTACCACCAGG
GCGGGGAAATCCGTCGCCCCGCAATGGTCCGCGCCTTCTCGTCGCTGTTGATGCGCGACGAGAACGGGCAGCATTGGCTG
GTCACGCCGTTCCAGCGCCTGTCCATCGAAGTCGACGACGCCGCGTTCATCGCCACGGACATGCAGGCAAGGACCGACCC
CGAGGGCCGCCCCGCCCTCACCTTCCGGCTCAACAGCGACGACATCGTCATCTGCGGACCGGAGCACCGCTTGCGCGTAG
GCGGCACCGCCGACCTTCCCGCCTTCTACCTGGCGGTCCGCCATGGCACCGAAGCCCGGCTCAACCGCAGTACATATGTG
CAACTGATCGAACATGCACTGGCCGGGCATGGCGACGAACTGGTCGTCGAAAGTCTCGGGCAGCGCTTCGGGCTGGTACC
GCAGCCGTGA

Upstream 100 bases:

>100_bases
CAGCGCCGCCTGCTGTGTCGCACCGCCAATCCGGCAGTTCTGCCGCAAGAGGGCATGTTGGGCCCTTGGCGGCGCTGAGC
CGATCTGGCATCGGCGGATC

Downstream 100 bases:

>100_bases
GCCTGCACGATCGCCTGACCAGGCTCTATGTCGAGGGGCACCGCACCCCGGCGCAGGACCTTTACGAAGACTGGCGCCCC
TTGCCCGAACACGGCCTGCG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 189; Mature: 188

Protein sequence:

>189_residues
MPYVPPPELASLSLAEIAAQVAARKLPPLSQWTPQESGNSEMRIAADGRWYHQGGEIRRPAMVRAFSSLLMRDENGQHWL
VTPFQRLSIEVDDAAFIATDMQARTDPEGRPALTFRLNSDDIVICGPEHRLRVGGTADLPAFYLAVRHGTEARLNRSTYV
QLIEHALAGHGDELVVESLGQRFGLVPQP

Sequences:

>Translated_189_residues
MPYVPPPELASLSLAEIAAQVAARKLPPLSQWTPQESGNSEMRIAADGRWYHQGGEIRRPAMVRAFSSLLMRDENGQHWL
VTPFQRLSIEVDDAAFIATDMQARTDPEGRPALTFRLNSDDIVICGPEHRLRVGGTADLPAFYLAVRHGTEARLNRSTYV
QLIEHALAGHGDELVVESLGQRFGLVPQP
>Mature_188_residues
PYVPPPELASLSLAEIAAQVAARKLPPLSQWTPQESGNSEMRIAADGRWYHQGGEIRRPAMVRAFSSLLMRDENGQHWLV
TPFQRLSIEVDDAAFIATDMQARTDPEGRPALTFRLNSDDIVICGPEHRLRVGGTADLPAFYLAVRHGTEARLNRSTYVQ
LIEHALAGHGDELVVESLGQRFGLVPQP

Specific function: Unknown

COG id: COG3816

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 20918; Mature: 20787

Theoretical pI: Translated: 5.93; Mature: 5.93

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPYVPPPELASLSLAEIAAQVAARKLPPLSQWTPQESGNSEMRIAADGRWYHQGGEIRRP
CCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEEEECCEEEECCCCCCCH
AMVRAFSSLLMRDENGQHWLVTPFQRLSIEVDDAAFIATDMQARTDPEGRPALTFRLNSD
HHHHHHHHHHHCCCCCCEEEECCHHHEEEEECCCEEEEECCCCCCCCCCCCEEEEEECCC
DIVICGPEHRLRVGGTADLPAFYLAVRHGTEARLNRSTYVQLIEHALAGHGDELVVESLG
CEEEECCCCEEEECCCCCCHHEEEEECCCCHHHHCHHHHHHHHHHHHHCCCCHHHHHHHH
QRFGLVPQP
HHCCCCCCC
>Mature Secondary Structure 
PYVPPPELASLSLAEIAAQVAARKLPPLSQWTPQESGNSEMRIAADGRWYHQGGEIRRP
CCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEEEECCEEEECCCCCCCH
AMVRAFSSLLMRDENGQHWLVTPFQRLSIEVDDAAFIATDMQARTDPEGRPALTFRLNSD
HHHHHHHHHHHCCCCCCEEEECCHHHEEEEECCCEEEEECCCCCCCCCCCCEEEEEECCC
DIVICGPEHRLRVGGTADLPAFYLAVRHGTEARLNRSTYVQLIEHALAGHGDELVVESLG
CEEEECCCCEEEECCCCCCHHEEEEECCCCHHHHCHHHHHHHHHHHHHCCCCHHHHHHHH
QRFGLVPQP
HHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA