| Definition | Novosphingobium aromaticivorans DSM 12444 chromosome, complete genome. |
|---|---|
| Accession | NC_007794 |
| Length | 3,561,584 |
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The map label for this gene is acpS
Identifier: 87198932
GI number: 87198932
Start: 964366
End: 964773
Strand: Reverse
Name: acpS
Synonym: Saro_0910
Alternate gene names: 87198932
Gene position: 964773-964366 (Counterclockwise)
Preceding gene: 87198933
Following gene: 87198931
Centisome position: 27.09
GC content: 67.65
Gene sequence:
>408_bases ATGGGCTCGGACCTGTGCAACATCGAGCGGATCAGCAATTCGCTCGAAAGGTTCGGCGAACGCTTCGTCAACCGGGTCTT CACCGATACCGAAAAGGCCAAGGCCGAGCGCCGTCCCTTCACCCGCGCCGGAACCCTGGCCAAGCGCTTCGCCGCGAAGG AAGCCTTTTCCAAGGCCGTCGGCACCGGGTTCAAGGCGGGCGTGTTCATGAAGGACATCGGCGTCGTCAACGCCCGCTCG GGCGCACCCACGCTTGCCCTGACCGGCGGGGCCGCCGCGCGCCTCGCCGCGATCACGCCTGAAGGCCACGAGGCCGTGGT CCACCTGACGCTCACCGACGATCACCCCTGGGCGCAGGCTTTCGTCGTGATCGAGGCCCGCCCGCTTCCCGGAAGCACCC CAGCTTGA
Upstream 100 bases:
>100_bases ACATCGGCCACTACCTGATCGGCGAGGCGATCTTCGTCGGGCTCGATACGGCGGTGCGCCGGATGCGCGATCTCATGGAC GAAGCGCGGTGATCATCGGC
Downstream 100 bases:
>100_bases ACAACCAGATTTCCCGGCCGCCGGAACCCCTTTCCCCGCCCCCTCCACCGCCACACAGCGTCGACTGGTGGTCGGAAATT CGCGGCCTCGTCGCCATGCT
Product: 4'-phosphopantetheinyl transferase
Products: NA
Alternate protein names: Holo-ACP synthase; 4'-phosphopantetheinyl transferase AcpS [H]
Number of amino acids: Translated: 135; Mature: 134
Protein sequence:
>135_residues MGSDLCNIERISNSLERFGERFVNRVFTDTEKAKAERRPFTRAGTLAKRFAAKEAFSKAVGTGFKAGVFMKDIGVVNARS GAPTLALTGGAAARLAAITPEGHEAVVHLTLTDDHPWAQAFVVIEARPLPGSTPA
Sequences:
>Translated_135_residues MGSDLCNIERISNSLERFGERFVNRVFTDTEKAKAERRPFTRAGTLAKRFAAKEAFSKAVGTGFKAGVFMKDIGVVNARS GAPTLALTGGAAARLAAITPEGHEAVVHLTLTDDHPWAQAFVVIEARPLPGSTPA >Mature_134_residues GSDLCNIERISNSLERFGERFVNRVFTDTEKAKAERRPFTRAGTLAKRFAAKEAFSKAVGTGFKAGVFMKDIGVVNARSG APTLALTGGAAARLAAITPEGHEAVVHLTLTDDHPWAQAFVVIEARPLPGSTPA
Specific function: Transfers the 4'-phosphopantetheine moiety from coenzyme A to a Ser of acyl-carrier-protein [H]
COG id: COG0736
COG function: function code I; Phosphopantetheinyl transferase (holo-ACP synthase)
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the P-Pant transferase superfamily. AcpS family [H]
Homologues:
Organism=Escherichia coli, GI1788916, Length=128, Percent_Identity=37.5, Blast_Score=69, Evalue=1e-13,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR008278 - InterPro: IPR002582 - InterPro: IPR004568 - ProDom: PD004282 [H]
Pfam domain/function: PF01648 ACPS [H]
EC number: =2.7.8.7 [H]
Molecular weight: Translated: 14382; Mature: 14250
Theoretical pI: Translated: 10.38; Mature: 10.38
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 0.7 %Met (Mature Protein) 1.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGSDLCNIERISNSLERFGERFVNRVFTDTEKAKAERRPFTRAGTLAKRFAAKEAFSKAV CCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHCCCCCHHHHHHHHHHHHHHHHHHH GTGFKAGVFMKDIGVVNARSGAPTLALTGGAAARLAAITPEGHEAVVHLTLTDDHPWAQA CCCCCCCEEEHHCCEEECCCCCCEEEEECCCCEEEEEECCCCCCEEEEEEEECCCCCCEE FVVIEARPLPGSTPA EEEEEECCCCCCCCC >Mature Secondary Structure GSDLCNIERISNSLERFGERFVNRVFTDTEKAKAERRPFTRAGTLAKRFAAKEAFSKAV CCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHCCCCCHHHHHHHHHHHHHHHHHHH GTGFKAGVFMKDIGVVNARSGAPTLALTGGAAARLAAITPEGHEAVVHLTLTDDHPWAQA CCCCCCCEEEHHCCEEECCCCCCEEEEECCCCEEEEEECCCCCCEEEEEEEECCCCCCEE FVVIEARPLPGSTPA EEEEEECCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA