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The map label for this gene is pdxJ [H]

Identifier: 87198933

GI number: 87198933

Start: 964782

End: 965525

Strand: Reverse

Name: pdxJ [H]

Synonym: Saro_0911

Alternate gene names: 87198933

Gene position: 965525-964782 (Counterclockwise)

Preceding gene: 87198934

Following gene: 87198932

Centisome position: 27.11

GC content: 70.16

Gene sequence:

>744_bases
GTGAACAGCGCCCTGACCTCGGGACGCCTCCGCCTCGGCGTCAACATCGACCACGTCGCCACCATCCGCAACGCGCGCGG
CGGCGACCATCCCGATCCCGTGCGCGCGGCAGAGATCGTCGCGGCGGTCGGCGGCGACGGGATCACCGCGCACCTGCGCG
AGGATCGCCGCCACATCCGCGACGAGGACCTCGCCCGAATCCAGGCGGCAACCAGCCTGCCGCTCAATCTCGAAATGGCC
GCGACCGACGAGATGCTCGAGATCGCGCTGCGCCACAAGCCGCACGCCGCCTGCATCGTCCCCGAACGGCGCGAGGAACG
CACGACCGAAGGCGGGCTCGACGCCGCCGGCCAGCACAACCGCCTGGCCCCGATCGTCGCGCGTCTTTCGGATGCCGGCA
TCCGCGTCAGCCTGTTCATCGCCCCCGAGCCGCGGCAGATCGAAGCCGCGATGAAGCTCGGCGCGCCGGTGGTGGAACTG
CACACGGGCGAATATGCCCATGCCGAAGGCGATGCCCGCGCCGTGGAACTCAGGCGCATCGCCGACATGGCCGCGCTTGC
CGCGCGCAACGGCATCGAACCGCACGCCGGCCACGGCCTCACCTACGAGAACGTGCAGCCCATCGCCGCGATTCCACAGC
TCGCGGAACTCAACATCGGCCACTACCTGATCGGCGAGGCGATCTTCGTCGGGCTCGATACGGCGGTGCGCCGGATGCGC
GATCTCATGGACGAAGCGCGGTGA

Upstream 100 bases:

>100_bases
TTCCGCTGGTGGCCCTGAACTTCCCGACCTACGCGCCTGACGAGCTTCCGCCCGAACTCGCGGCGACCGAAGCCGTGAAG
CCCGGCAGCCGGGCCAAGCC

Downstream 100 bases:

>100_bases
TCATCGGCATGGGCTCGGACCTGTGCAACATCGAGCGGATCAGCAATTCGCTCGAAAGGTTCGGCGAACGCTTCGTCAAC
CGGGTCTTCACCGATACCGA

Product: pyridoxine 5'-phosphate synthase

Products: NA

Alternate protein names: PNP synthase [H]

Number of amino acids: Translated: 247; Mature: 247

Protein sequence:

>247_residues
MNSALTSGRLRLGVNIDHVATIRNARGGDHPDPVRAAEIVAAVGGDGITAHLREDRRHIRDEDLARIQAATSLPLNLEMA
ATDEMLEIALRHKPHAACIVPERREERTTEGGLDAAGQHNRLAPIVARLSDAGIRVSLFIAPEPRQIEAAMKLGAPVVEL
HTGEYAHAEGDARAVELRRIADMAALAARNGIEPHAGHGLTYENVQPIAAIPQLAELNIGHYLIGEAIFVGLDTAVRRMR
DLMDEAR

Sequences:

>Translated_247_residues
MNSALTSGRLRLGVNIDHVATIRNARGGDHPDPVRAAEIVAAVGGDGITAHLREDRRHIRDEDLARIQAATSLPLNLEMA
ATDEMLEIALRHKPHAACIVPERREERTTEGGLDAAGQHNRLAPIVARLSDAGIRVSLFIAPEPRQIEAAMKLGAPVVEL
HTGEYAHAEGDARAVELRRIADMAALAARNGIEPHAGHGLTYENVQPIAAIPQLAELNIGHYLIGEAIFVGLDTAVRRMR
DLMDEAR
>Mature_247_residues
MNSALTSGRLRLGVNIDHVATIRNARGGDHPDPVRAAEIVAAVGGDGITAHLREDRRHIRDEDLARIQAATSLPLNLEMA
ATDEMLEIALRHKPHAACIVPERREERTTEGGLDAAGQHNRLAPIVARLSDAGIRVSLFIAPEPRQIEAAMKLGAPVVEL
HTGEYAHAEGDARAVELRRIADMAALAARNGIEPHAGHGLTYENVQPIAAIPQLAELNIGHYLIGEAIFVGLDTAVRRMR
DLMDEAR

Specific function: Catalyzes the complicated ring closure reaction between the two acyclic compounds 1-deoxy-D-xylulose-5-phosphate (DXP) and 3-amino-2-oxopropyl phosphate (1-amino-acetone-3-phosphate or AAP) to form pyridoxine 5'-phosphate (PNP) and inorganic phosphate [H]

COG id: COG0854

COG function: function code H; Pyridoxal phosphate biosynthesis protein

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the PNP synthase family [H]

Homologues:

Organism=Escherichia coli, GI1788917, Length=239, Percent_Identity=57.7405857740586, Blast_Score=266, Evalue=1e-72,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013785
- InterPro:   IPR004569 [H]

Pfam domain/function: PF03740 PdxJ [H]

EC number: =2.6.99.2 [H]

Molecular weight: Translated: 26699; Mature: 26699

Theoretical pI: Translated: 6.23; Mature: 6.23

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNSALTSGRLRLGVNIDHVATIRNARGGDHPDPVRAAEIVAAVGGDGITAHLREDRRHIR
CCCCCCCCEEEEECCHHHHHHHHCCCCCCCCCCHHHHHHHHHHCCCCEEHHHHHHHHHCC
DEDLARIQAATSLPLNLEMAATDEMLEIALRHKPHAACIVPERREERTTEGGLDAAGQHN
HHHHHHHHHHHCCCEEEEEHHHHHHHHHHHHCCCCEEEECCCHHHHCCCCCCCCCCCCCC
RLAPIVARLSDAGIRVSLFIAPEPRQIEAAMKLGAPVVELHTGEYAHAEGDARAVELRRI
CHHHHHHHHCCCCEEEEEEECCCCHHHHHHHHCCCCEEEEECCCEECCCCCHHHHHHHHH
ADMAALAARNGIEPHAGHGLTYENVQPIAAIPQLAELNIGHYLIGEAIFVGLDTAVRRMR
HHHHHHHHHCCCCCCCCCCCCCCCCCHHHHCCHHHHCCCCHHHHHHHHHHHHHHHHHHHH
DLMDEAR
HHHHHCC
>Mature Secondary Structure
MNSALTSGRLRLGVNIDHVATIRNARGGDHPDPVRAAEIVAAVGGDGITAHLREDRRHIR
CCCCCCCCEEEEECCHHHHHHHHCCCCCCCCCCHHHHHHHHHHCCCCEEHHHHHHHHHCC
DEDLARIQAATSLPLNLEMAATDEMLEIALRHKPHAACIVPERREERTTEGGLDAAGQHN
HHHHHHHHHHHCCCEEEEEHHHHHHHHHHHHCCCCEEEECCCHHHHCCCCCCCCCCCCCC
RLAPIVARLSDAGIRVSLFIAPEPRQIEAAMKLGAPVVELHTGEYAHAEGDARAVELRRI
CHHHHHHHHCCCCEEEEEEECCCCHHHHHHHHCCCCEEEEECCCEECCCCCHHHHHHHHH
ADMAALAARNGIEPHAGHGLTYENVQPIAAIPQLAELNIGHYLIGEAIFVGLDTAVRRMR
HHHHHHHHHCCCCCCCCCCCCCCCCCHHHHCCHHHHCCCCHHHHHHHHHHHHHHHHHHHH
DLMDEAR
HHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA